RNA–Protein interactions for RNA: ENST00000592540.5

SPC24-206, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC24, Length 2,315 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-206ENST00000592540 LINC00208Q96KT6 92 aa11.3□□□□□ -0.6
SPC24-206ENST00000592540 KRTAP29-1A8MX34 341 aaPredicted RBP11.3□□□□□ -0.6
SPC24-206ENST00000592540 PRB2P02812 416 aaPredicted RBP11.29□□□□□ -0.6
SPC24-206ENST00000592540 BAHCC1Q9P281 2608 aa11.28□□□□□ -0.6
SPC24-206ENST00000592540 B9D2Q9BPU9 175 aa11.27□□□□□ -0.6
SPC24-206ENST00000592540 CMYA5Q8N3K9 4069 aa11.27□□□□□ -0.6
SPC24-206ENST00000592540 KMT2BQ9UMN6 2715 aaPredicted RBP11.27□□□□□ -0.6
SPC24-206ENST00000592540 HECTD1Q9ULT8 2610 aa11.26□□□□□ -0.61
SPC24-206ENST00000592540 A0A096LNI7 61 aa11.24□□□□□ -0.61
SPC24-206ENST00000592540 A8MUN3 132 aa11.24□□□□□ -0.61
SPC24-206ENST00000592540 H0Y9P7 68 aa11.24□□□□□ -0.61
SPC24-206ENST00000592540 FLNBO75369 2602 aaKnown RBP11.24□□□□□ -0.61
SPC24-206ENST00000592540 UBE2AP49459 152 aa11.24□□□□□ -0.61
SPC24-206ENST00000592540 CASC2Q6XLA1 102 aa11.24□□□□□ -0.61
SPC24-206ENST00000592540 IGKV2-24A0A0C4DH68 120 aa11.23□□□□□ -0.61
SPC24-206ENST00000592540 SPANXA2-OT1Q8N9U9 137 aa11.23□□□□□ -0.61
SPC24-206ENST00000592540 H3BPC8 53 aa11.22□□□□□ -0.61
SPC24-206ENST00000592540 CNBPP62633 177 aaKnown RBP11.21□□□□□ -0.61
SPC24-206ENST00000592540 C16orf90A8MZG2 172 aa11.21□□□□□ -0.62
SPC24-206ENST00000592540 DNAH3Q8TD57 4116 aa11.19□□□□□ -0.62
SPC24-206ENST00000592540 A8MWP4 228 aa11.18□□□□□ -0.62
SPC24-206ENST00000592540 DNAH10Q8IVF4 4471 aa11.18□□□□□ -0.62
SPC24-206ENST00000592540 Q5VV11 94 aa11.18□□□□□ -0.62
SPC24-206ENST00000592540 LINC00472Q9H8W2 130 aa11.18□□□□□ -0.62
SPC24-206ENST00000592540 PMAIP1Q13794 54 aa11.17□□□□□ -0.62
SPC24-206ENST00000592540 SEC61GP60059 68 aa11.15□□□□□ -0.62
SPC24-206ENST00000592540 SPRR1BP22528 89 aa11.15□□□□□ -0.62
SPC24-206ENST00000592540 Q8N9P0 234 aaPredicted RBP11.15□□□□□ -0.62
SPC24-206ENST00000592540 C9orf163Q8N9P6 203 aa11.14□□□□□ -0.63
SPC24-206ENST00000592540 SRRM2Q9UQ35 2752 aaKnown RBP11.13□□□□□ -0.63
SPC24-206ENST00000592540 KRTAP11-1Q8IUC1 163 aa11.13□□□□□ -0.63
SPC24-206ENST00000592540 MAST4O15021 2626 aa11.13□□□□□ -0.63
SPC24-206ENST00000592540 A8MU10 97 aa11.11□□□□□ -0.63
SPC24-206ENST00000592540 PHF5AQ7RTV0 110 aaKnown RBP11.11□□□□□ -0.63
SPC24-206ENST00000592540 LIMD2Q9BT23 127 aa11.11□□□□□ -0.63
SPC24-206ENST00000592540 H0Y9J4 135 aa11.1□□□□□ -0.63
SPC24-206ENST00000592540 KRTAP1-5Q9BYS1 174 aa11.08□□□□□ -0.64
SPC24-206ENST00000592540 HUWE1Q7Z6Z7 4374 aaKnown RBP11.08□□□□□ -0.64
SPC24-206ENST00000592540 MMP24-AS1A0A0U1RRL7 71 aa11.07□□□□□ -0.64
SPC24-206ENST00000592540 CHKB-CPT1BH3BT56 60 aa11.07□□□□□ -0.64
SPC24-206ENST00000592540 CHTF8P0CG12 524 aa11.07□□□□□ -0.64
SPC24-206ENST00000592540 PRR15LQ9BU68 103 aa11.07□□□□□ -0.64
SPC24-206ENST00000592540 STAB1Q9NY15 2570 aa11.06□□□□□ -0.64
SPC24-206ENST00000592540 DNAH9Q9NYC9 4486 aa11.06□□□□□ -0.64
SPC24-206ENST00000592540 NOTCH1P46531 2555 aa11.06□□□□□ -0.64
SPC24-206ENST00000592540 LYSTQ99698 3801 aa11.04□□□□□ -0.64
SPC24-206ENST00000592540 COA5Q86WW8 74 aa11.03□□□□□ -0.64
SPC24-206ENST00000592540 IGLV7-46A0A075B6I9 117 aa11.03□□□□□ -0.64
SPC24-206ENST00000592540 TENM2Q9NT68 2774 aa11.02□□□□□ -0.65
SPC24-206ENST00000592540 KRTAP24-1Q3LI83 254 aa11.02□□□□□ -0.65
SPC24-206ENST00000592540 FBN1P35555 2871 aaKnown RBP10.98□□□□□ -0.65
SPC24-206ENST00000592540 Q75L30 129 aa10.98□□□□□ -0.65
SPC24-206ENST00000592540 NBEAL1Q6ZS30 2694 aa10.98□□□□□ -0.65
SPC24-206ENST00000592540 LOC101927531A0A1B0GV80 90 aa10.97□□□□□ -0.65
SPC24-206ENST00000592540 C14orf177Q52M58 125 aa10.96□□□□□ -0.65
SPC24-206ENST00000592540 PCOTHQ58A44 107 aa10.96□□□□□ -0.65
SPC24-206ENST00000592540 Q96NJ1 140 aa10.96□□□□□ -0.65
SPC24-206ENST00000592540 ASB16-AS1Q495Z4 193 aa10.96□□□□□ -0.66
SPC24-206ENST00000592540 CD164Q04900 197 aa10.95□□□□□ -0.66
SPC24-206ENST00000592540 TP53AIP1Q9HCN2 124 aa10.95□□□□□ -0.66
SPC24-206ENST00000592540 COL6A5A8TX70 2615 aa10.94□□□□□ -0.66
SPC24-206ENST00000592540 LCA10Q71F78 164 aa10.93□□□□□ -0.66
SPC24-206ENST00000592540 KRTAP13-1Q8IUC0 172 aa10.93□□□□□ -0.66
SPC24-206ENST00000592540 MOBPQ13875 183 aa10.93□□□□□ -0.66
SPC24-206ENST00000592540 A6NED7 52 aa10.91□□□□□ -0.66
SPC24-206ENST00000592540 CSMD3Q7Z407 3707 aa10.91□□□□□ -0.66
SPC24-206ENST00000592540 Q6ZR54 194 aa10.9□□□□□ -0.66
SPC24-206ENST00000592540 C8orf17Q9NRJ1 99 aa10.9□□□□□ -0.66
SPC24-206ENST00000592540 K7EIL1 84 aa10.9□□□□□ -0.67
SPC24-206ENST00000592540 UBE2DNLQ8IWF7 75 aa10.9□□□□□ -0.67
SPC24-206ENST00000592540 SPTSSBQ8NFR3 76 aa10.9□□□□□ -0.67
SPC24-206ENST00000592540 IGLV9-49A0A0B4J1Y8 123 aa10.89□□□□□ -0.67
SPC24-206ENST00000592540 ATP11AUNQ6ZP68 121 aa10.89□□□□□ -0.67
SPC24-206ENST00000592540 PANO1I0J062 215 aa10.87□□□□□ -0.67
SPC24-206ENST00000592540 LINC01558Q9Y6Z2 57 aa10.86□□□□□ -0.67
SPC24-206ENST00000592540 SPAG11AQ6PDA7 123 aa10.85□□□□□ -0.67
SPC24-206ENST00000592540 NDUFS5O43920 106 aa10.84□□□□□ -0.67
SPC24-206ENST00000592540 PLAC8Q9NZF1 115 aa10.84□□□□□ -0.67
SPC24-206ENST00000592540 IGHV6-1A0A0B4J1U7 121 aa10.84□□□□□ -0.67
SPC24-206ENST00000592540 KTN1-AS1Q86SY8 53 aa10.84□□□□□ -0.67
SPC24-206ENST00000592540 A0A1B0GVX0 72 aa10.83□□□□□ -0.68
SPC24-206ENST00000592540 CDC42SE1Q9NRR8 79 aa10.83□□□□□ -0.68
SPC24-206ENST00000592540 APLNQ9ULZ1 77 aa10.82□□□□□ -0.68
SPC24-206ENST00000592540 DNAH7Q8WXX0 4024 aa10.81□□□□□ -0.68
SPC24-206ENST00000592540 COL7A1Q02388 2944 aa10.81□□□□□ -0.68
SPC24-206ENST00000592540 HRES1P13985 223 aa10.8□□□□□ -0.68
SPC24-206ENST00000592540 LINC00483Q53H64 154 aa10.8□□□□□ -0.68
SPC24-206ENST00000592540 MRPL34Q9BQ48 92 aaKnown RBP10.79□□□□□ -0.68
SPC24-206ENST00000592540 STAB2Q8WWQ8 2551 aa10.79□□□□□ -0.68
SPC24-206ENST00000592540 A6NN06 94 aa10.78□□□□□ -0.68
SPC24-206ENST00000592540 DYNC2H1Q8NCM8 4307 aaKnown RBP10.77□□□□□ -0.69
SPC24-206ENST00000592540 CDK2AP2O75956 126 aa10.76□□□□□ -0.69
SPC24-206ENST00000592540 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.75□□□□□ -0.69
SPC24-206ENST00000592540 A0A087X002 238 aa10.74□□□□□ -0.69
SPC24-206ENST00000592540 NOTCH2NLQ7Z3S9 236 aa10.74□□□□□ -0.69
SPC24-206ENST00000592540 SPACA4Q8TDM5 124 aa10.74□□□□□ -0.69
SPC24-206ENST00000592540 WWC2-AS2Q96NR7 200 aa10.74□□□□□ -0.69
SPC24-206ENST00000592540 NBDYA0A0U1RRE5 68 aa10.71□□□□□ -0.69
SPC24-206ENST00000592540 SPINK7P58062 85 aa10.71□□□□□ -0.69
SPC24-206ENST00000592540 Q6ZRN7 208 aaPredicted RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms