RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 TRAV13-2A0A0B4J235 113 aa7.72□□□□□ -1.17
APOC1-208ENST00000592535 TEX49A0A1B0GTD5 131 aa7.72□□□□□ -1.17
APOC1-208ENST00000592535 BATFQ16520 125 aa7.72□□□□□ -1.17
APOC1-208ENST00000592535 K7ERJ3 54 aa7.71□□□□□ -1.18
APOC1-208ENST00000592535 LINC01547P58512 204 aaPredicted RBP7.71□□□□□ -1.18
APOC1-208ENST00000592535 SMIM11BQ8TCY0 68 aa7.71□□□□□ -1.18
APOC1-208ENST00000592535 ASB16-AS1Q495Z4 193 aa7.7□□□□□ -1.18
APOC1-208ENST00000592535 SMIM29Q86T20 159 aa7.7□□□□□ -1.18
APOC1-208ENST00000592535 RAB37Q96AX2 223 aa7.7□□□□□ -1.18
APOC1-208ENST00000592535 LIMD2Q9BT23 127 aa7.7□□□□□ -1.18
APOC1-208ENST00000592535 IGLV5-48A0A075B6I7 105 aa7.69□□□□□ -1.18
APOC1-208ENST00000592535 TAX1BP3O14907 124 aa7.69□□□□□ -1.18
APOC1-208ENST00000592535 COL5A1-AS1Q5SY13 56 aa7.69□□□□□ -1.18
APOC1-208ENST00000592535 FAT4Q6V0I7 4981 aa7.69□□□□□ -1.18
APOC1-208ENST00000592535 LCE2AQ5TA79 106 aaPredicted RBP7.68□□□□□ -1.18
APOC1-208ENST00000592535 SEC61BP60468 96 aaKnown RBP7.66□□□□□ -1.18
APOC1-208ENST00000592535 CD164Q04900 197 aa7.66□□□□□ -1.18
APOC1-208ENST00000592535 XP32Q5T750 250 aa7.66□□□□□ -1.18
APOC1-208ENST00000592535 A0A0G2JQZ4 141 aa7.65□□□□□ -1.18
APOC1-208ENST00000592535 C9orf118A6NHY6 69 aa7.65□□□□□ -1.18
APOC1-208ENST00000592535 KRTAP4-1Q9BYQ7 146 aa7.65□□□□□ -1.18
APOC1-208ENST00000592535 H7C2G1 150 aa7.64□□□□□ -1.19
APOC1-208ENST00000592535 VAMP3Q15836 100 aa7.63□□□□□ -1.19
APOC1-208ENST00000592535 LINC00575Q6W349 94 aa7.62□□□□□ -1.19
APOC1-208ENST00000592535 C9orf92A6NGG3 77 aa7.6□□□□□ -1.19
APOC1-208ENST00000592535 H3BUT2 72 aa7.6□□□□□ -1.19
APOC1-208ENST00000592535 TRIAP1O43715 76 aa7.6□□□□□ -1.19
APOC1-208ENST00000592535 Q5XG85 94 aa7.6□□□□□ -1.19
APOC1-208ENST00000592535 NAA38Q9BRA0 125 aaKnown RBP7.6□□□□□ -1.19
APOC1-208ENST00000592535 hADV29S1A0JD25 119 aa7.59□□□□□ -1.19
APOC1-208ENST00000592535 Q6ZQY7 126 aa7.59□□□□□ -1.19
APOC1-208ENST00000592535 A0A1W2PPM0 123 aa7.58□□□□□ -1.2
APOC1-208ENST00000592535 H0YGX0 51 aa7.58□□□□□ -1.2
APOC1-208ENST00000592535 F8WEM9 126 aa7.57□□□□□ -1.2
APOC1-208ENST00000592535 PSMB2P49721 201 aa7.57□□□□□ -1.2
APOC1-208ENST00000592535 C1orf195Q5TG92 126 aa7.57□□□□□ -1.2
APOC1-208ENST00000592535 COX6CP09669 75 aa7.56□□□□□ -1.2
APOC1-208ENST00000592535 SCGB1C2P0DMR2 95 aa7.54□□□□□ -1.2
APOC1-208ENST00000592535 FAM218AQ96MZ4 157 aa7.54□□□□□ -1.2
APOC1-208ENST00000592535 FABP2P12104 132 aa7.53□□□□□ -1.2
APOC1-208ENST00000592535 PCOTHQ58A44 107 aa7.53□□□□□ -1.2
APOC1-208ENST00000592535 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.53□□□□□ -1.2
APOC1-208ENST00000592535 CLEC2BQ92478 149 aa7.53□□□□□ -1.2
APOC1-208ENST00000592535 IGLV8-61A0A075B6I0 122 aa7.52□□□□□ -1.21
APOC1-208ENST00000592535 TRBV20-1A0A075B6N2 111 aa7.52□□□□□ -1.21
APOC1-208ENST00000592535 TCL1BO95988 128 aa7.52□□□□□ -1.21
APOC1-208ENST00000592535 A0A1B0GX51 115 aa7.51□□□□□ -1.21
APOC1-208ENST00000592535 LST1O00453 97 aa7.51□□□□□ -1.21
APOC1-208ENST00000592535 LYRM7Q5U5X0 104 aa7.51□□□□□ -1.21
APOC1-208ENST00000592535 Q6JHZ5 121 aa7.51□□□□□ -1.21
APOC1-208ENST00000592535 IGFL1Q6UW32 110 aa7.51□□□□□ -1.21
APOC1-208ENST00000592535 KRTAP9-2Q9BYQ4 174 aa7.51□□□□□ -1.21
APOC1-208ENST00000592535 OCIAD2Q56VL3 154 aa7.5□□□□□ -1.21
APOC1-208ENST00000592535 A0A1B0GV90 55 aa7.49□□□□□ -1.21
APOC1-208ENST00000592535 TRACP01848 142 aa7.49□□□□□ -1.21
APOC1-208ENST00000592535 PPDPFLQ8WWR9 84 aa7.49□□□□□ -1.21
APOC1-208ENST00000592535 TRBV7-7A0A0K0K1E9 115 aa7.48□□□□□ -1.21
APOC1-208ENST00000592535 SPCS1Q9Y6A9 102 aa7.48□□□□□ -1.21
APOC1-208ENST00000592535 K7EP34 96 aa7.47□□□□□ -1.21
APOC1-208ENST00000592535 ATXN8Q156A1 80 aa7.47□□□□□ -1.21
APOC1-208ENST00000592535 H3BMG7 143 aa7.45□□□□□ -1.22
APOC1-208ENST00000592535 LCE2CQ5TA81 110 aa7.45□□□□□ -1.22
APOC1-208ENST00000592535 SNCGO76070 127 aa7.44□□□□□ -1.22
APOC1-208ENST00000592535 RPL37P61927 97 aaKnown RBP7.44□□□□□ -1.22
APOC1-208ENST00000592535 KRTAP19-2Q3LHN2 52 aa7.44□□□□□ -1.22
APOC1-208ENST00000592535 GTF2H5Q6ZYL4 71 aa7.44□□□□□ -1.22
APOC1-208ENST00000592535 PRO0461Q9UI25 63 aa7.43□□□□□ -1.22
APOC1-208ENST00000592535 UBE2V1Q13404 147 aa7.42□□□□□ -1.22
APOC1-208ENST00000592535 BAALC-AS2P0C853 105 aa7.4□□□□□ -1.22
APOC1-208ENST00000592535 SMCPP49901 116 aaPredicted RBP7.4□□□□□ -1.22
APOC1-208ENST00000592535 NDUFV3P56181 108 aaKnown RBP7.4□□□□□ -1.22
APOC1-208ENST00000592535 C9JAW5 83 aa7.39□□□□□ -1.23
APOC1-208ENST00000592535 H3BQ85 93 aa7.38□□□□□ -1.23
APOC1-208ENST00000592535 DNAL4O96015 105 aa7.38□□□□□ -1.23
APOC1-208ENST00000592535 ORMDL1Q9P0S3 153 aa7.38□□□□□ -1.23
APOC1-208ENST00000592535 Q6Q795 121 aa7.37□□□□□ -1.23
APOC1-208ENST00000592535 F8W1H4 67 aa7.36□□□□□ -1.23
APOC1-208ENST00000592535 H3BT86 120 aa7.36□□□□□ -1.23
APOC1-208ENST00000592535 GHRHP01286 108 aa7.36□□□□□ -1.23
APOC1-208ENST00000592535 TMEM256-PLSCR3K7ERE1 68 aa7.35□□□□□ -1.23
APOC1-208ENST00000592535 MT1HP80294 61 aa7.35□□□□□ -1.23
APOC1-208ENST00000592535 TEN1Q86WV5 123 aa7.35□□□□□ -1.23
APOC1-208ENST00000592535 ANKRD29Q8N6D5 301 aa7.35□□□□□ -1.23
APOC1-208ENST00000592535 OBSCN-AS1Q96MR7 158 aa7.35□□□□□ -1.23
APOC1-208ENST00000592535 MTURNQ8N3F0 131 aa7.34□□□□□ -1.23
APOC1-208ENST00000592535 SS18L2Q9UHA2 77 aa7.34□□□□□ -1.23
APOC1-208ENST00000592535 A0A087WSZ3 146 aa7.32□□□□□ -1.24
APOC1-208ENST00000592535 Q75L30 129 aa7.3□□□□□ -1.24
APOC1-208ENST00000592535 A0A1W2PNM2 257 aa7.29□□□□□ -1.24
APOC1-208ENST00000592535 Q96NJ1 140 aa7.29□□□□□ -1.24
APOC1-208ENST00000592535 ATP11AUNQ6ZP68 121 aa7.28□□□□□ -1.24
APOC1-208ENST00000592535 A0A1B0GV72 72 aa7.27□□□□□ -1.25
APOC1-208ENST00000592535 ETDBQ3ZM63 59 aa7.26□□□□□ -1.25
APOC1-208ENST00000592535 LCE2DQ5TA82 110 aaPredicted RBP7.26□□□□□ -1.25
APOC1-208ENST00000592535 COX6B2Q6YFQ2 88 aa7.26□□□□□ -1.25
APOC1-208ENST00000592535 KRTAP9-6A0A140TA67 174 aa7.25□□□□□ -1.25
APOC1-208ENST00000592535 JMJD7-PLA2G4BH0Y9G9 81 aa7.25□□□□□ -1.25
APOC1-208ENST00000592535 TRBV7-4A0A0J9YYF1 115 aa7.23□□□□□ -1.25
APOC1-208ENST00000592535 RBM3P98179 157 aaKnown RBP7.23□□□□□ -1.25
APOC1-208ENST00000592535 C20orf166-AS1Q96NR2 134 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms