RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 Q8NDZ9 215 aa4.4□□□□□ -1.71
VMP1-213ENST00000591877 PFN2P35080 140 aa4.39□□□□□ -1.71
VMP1-213ENST00000591877 FXYD2P54710 66 aa4.39□□□□□ -1.71
VMP1-213ENST00000591877 Q6ZVH6 145 aa4.39□□□□□ -1.71
VMP1-213ENST00000591877 SPANXDQ9BXN6 97 aa4.39□□□□□ -1.71
VMP1-213ENST00000591877 SPANXCQ9NY87 97 aa4.39□□□□□ -1.71
VMP1-213ENST00000591877 RPL28P46779 137 aaKnown RBP4.38□□□□□ -1.71
VMP1-213ENST00000591877 LCE1FQ5T754 118 aa4.38□□□□□ -1.71
VMP1-213ENST00000591877 ZNF625Q96I27 306 aaPredicted RBP4.38□□□□□ -1.71
VMP1-213ENST00000591877 SND1-IT1Q9HBX3 110 aa4.38□□□□□ -1.71
VMP1-213ENST00000591877 ANAPC11Q9NYG5 84 aa4.38□□□□□ -1.71
VMP1-213ENST00000591877 ERG28Q9UKR5 140 aa4.38□□□□□ -1.71
VMP1-213ENST00000591877 IGKV2-28A0A075B6P5 120 aa4.37□□□□□ -1.71
VMP1-213ENST00000591877 A0A1B0GV90 55 aa4.37□□□□□ -1.71
VMP1-213ENST00000591877 TAX1BP3O14907 124 aa4.37□□□□□ -1.71
VMP1-213ENST00000591877 IGKV2D-28P01615 120 aa4.37□□□□□ -1.71
VMP1-213ENST00000591877 IFITM1P13164 125 aa4.37□□□□□ -1.71
VMP1-213ENST00000591877 CAMK2N1Q7Z7J9 78 aa4.37□□□□□ -1.71
VMP1-213ENST00000591877 SMIM13P0DJ93 91 aa4.36□□□□□ -1.71
VMP1-213ENST00000591877 COX17Q14061 63 aa4.36□□□□□ -1.71
VMP1-213ENST00000591877 KRTAP13-2Q52LG2 175 aa4.36□□□□□ -1.71
VMP1-213ENST00000591877 COPS9Q8WXC6 57 aa4.36□□□□□ -1.71
VMP1-213ENST00000591877 NHP2Q9NX24 153 aaKnown RBP4.36□□□□□ -1.71
VMP1-213ENST00000591877 CRYGAP11844 174 aa4.35□□□□□ -1.71
VMP1-213ENST00000591877 PRLHP81277 87 aa4.35□□□□□ -1.71
VMP1-213ENST00000591877 TMEM126AQ9H061 195 aa4.35□□□□□ -1.71
VMP1-213ENST00000591877 A0A0B4J2C4 111 aa4.34□□□□□ -1.71
VMP1-213ENST00000591877 M0R378 163 aa4.34□□□□□ -1.71
VMP1-213ENST00000591877 UBE2AP49459 152 aa4.34□□□□□ -1.71
VMP1-213ENST00000591877 MEIG1Q5JSS6 88 aa4.34□□□□□ -1.71
VMP1-213ENST00000591877 MUSTN1Q8IVN3 82 aa4.34□□□□□ -1.71
VMP1-213ENST00000591877 K7ERJ3 54 aa4.33□□□□□ -1.72
VMP1-213ENST00000591877 LINC00158P58513 81 aa4.33□□□□□ -1.72
VMP1-213ENST00000591877 FAM19A1Q7Z5A9 133 aa4.33□□□□□ -1.72
VMP1-213ENST00000591877 H3BUT2 72 aa4.32□□□□□ -1.72
VMP1-213ENST00000591877 FAM229BQ4G0N7 80 aa4.32□□□□□ -1.72
VMP1-213ENST00000591877 LINC00308Q8TCZ7 52 aa4.32□□□□□ -1.72
VMP1-213ENST00000591877 RAB37Q96AX2 223 aa4.32□□□□□ -1.72
VMP1-213ENST00000591877 A0A1W2PPM0 123 aa4.31□□□□□ -1.72
VMP1-213ENST00000591877 VAMP3Q15836 100 aa4.31□□□□□ -1.72
VMP1-213ENST00000591877 LYRM7Q5U5X0 104 aa4.31□□□□□ -1.72
VMP1-213ENST00000591877 PRO1854Q9UHT4 67 aa4.31□□□□□ -1.72
VMP1-213ENST00000591877 FABP2P12104 132 aa4.3□□□□□ -1.72
VMP1-213ENST00000591877 SOSTDC1Q6X4U4 206 aa4.3□□□□□ -1.72
VMP1-213ENST00000591877 GTF2H5Q6ZYL4 71 aa4.3□□□□□ -1.72
VMP1-213ENST00000591877 C3orf22Q8N5N4 141 aa4.3□□□□□ -1.72
VMP1-213ENST00000591877 MIR7-3HGQ8N6C7 128 aa4.3□□□□□ -1.72
VMP1-213ENST00000591877 DAND5Q8N907 189 aa4.3□□□□□ -1.72
VMP1-213ENST00000591877 LOC107984156A0A0G2JMH3 177 aa4.29□□□□□ -1.72
VMP1-213ENST00000591877 K7EP34 96 aa4.29□□□□□ -1.72
VMP1-213ENST00000591877 SPRR1AP35321 89 aa4.29□□□□□ -1.72
VMP1-213ENST00000591877 NPC2P61916 151 aa4.29□□□□□ -1.72
VMP1-213ENST00000591877 KRTAP5-2Q701N4 177 aa4.29□□□□□ -1.72
VMP1-213ENST00000591877 ARL17AQ8IVW1 177 aa4.29□□□□□ -1.72
VMP1-213ENST00000591877 LINC00304Q8N9R0 145 aa4.29□□□□□ -1.72
VMP1-213ENST00000591877 RETNLBQ9BQ08 111 aa4.29□□□□□ -1.72
VMP1-213ENST00000591877 NAA38Q9BRA0 125 aaKnown RBP4.29□□□□□ -1.72
VMP1-213ENST00000591877 HIGD2AQ9BW72 106 aa4.29□□□□□ -1.72
VMP1-213ENST00000591877 MUC2Q02817 5179 aa4.28□□□□□ -1.72
VMP1-213ENST00000591877 NCR3O14931 201 aa4.28□□□□□ -1.72
VMP1-213ENST00000591877 SPRR4Q96PI1 79 aa4.28□□□□□ -1.72
VMP1-213ENST00000591877 SPCS1Q9Y6A9 102 aa4.28□□□□□ -1.72
VMP1-213ENST00000591877 TRAV13-2A0A0B4J235 113 aa4.27□□□□□ -1.73
VMP1-213ENST00000591877 TRBV10-3A0A0K0K1G6 114 aa4.27□□□□□ -1.73
VMP1-213ENST00000591877 NDUFC2O95298 119 aa4.27□□□□□ -1.73
VMP1-213ENST00000591877 LINC00337Q8N6G1 96 aa4.27□□□□□ -1.73
VMP1-213ENST00000591877 KCNQ1DNQ9H478 68 aa4.27□□□□□ -1.73
VMP1-213ENST00000591877 TRBV20-1A0A075B6N2 111 aa4.26□□□□□ -1.73
VMP1-213ENST00000591877 SMCR5Q8TEV8 140 aa4.26□□□□□ -1.73
VMP1-213ENST00000591877 COX6CP09669 75 aa4.25□□□□□ -1.73
VMP1-213ENST00000591877 PSMB2P49721 201 aa4.25□□□□□ -1.73
VMP1-213ENST00000591877 H7C2G1 150 aa4.24□□□□□ -1.73
VMP1-213ENST00000591877 ERC2-IT1O76042 136 aa4.24□□□□□ -1.73
VMP1-213ENST00000591877 TRBV10-2A0A0K0K1G8 114 aa4.23□□□□□ -1.73
VMP1-213ENST00000591877 ETDCA0A1B0GVM5 59 aa4.23□□□□□ -1.73
VMP1-213ENST00000591877 SCGB1C2P0DMR2 95 aa4.23□□□□□ -1.73
VMP1-213ENST00000591877 TPRXLQ17RH7 258 aa4.23□□□□□ -1.73
VMP1-213ENST00000591877 LINC00483Q53H64 154 aa4.23□□□□□ -1.73
VMP1-213ENST00000591877 Q9BRP9 147 aa4.23□□□□□ -1.73
VMP1-213ENST00000591877 ZNF706Q9Y5V0 76 aaPredicted RBP4.23□□□□□ -1.73
VMP1-213ENST00000591877 H3BMG7 143 aa4.22□□□□□ -1.73
VMP1-213ENST00000591877 TCL1BO95988 128 aa4.22□□□□□ -1.73
VMP1-213ENST00000591877 IGLV6-57P01721 117 aa4.22□□□□□ -1.73
VMP1-213ENST00000591877 ATXN8Q156A1 80 aa4.22□□□□□ -1.73
VMP1-213ENST00000591877 SPAG11AQ6PDA7 123 aa4.22□□□□□ -1.73
VMP1-213ENST00000591877 F8W1H4 67 aa4.21□□□□□ -1.74
VMP1-213ENST00000591877 LST1O00453 97 aa4.2□□□□□ -1.74
VMP1-213ENST00000591877 LCE3CQ5T5A8 94 aa4.2□□□□□ -1.74
VMP1-213ENST00000591877 Q6ZRX8 168 aa4.2□□□□□ -1.74
VMP1-213ENST00000591877 OR13C6PQ8NH95 151 aa4.2□□□□□ -1.74
VMP1-213ENST00000591877 SMIM11BQ8TCY0 68 aa4.2□□□□□ -1.74
VMP1-213ENST00000591877 PRO0461Q9UI25 63 aa4.2□□□□□ -1.74
VMP1-213ENST00000591877 MUC17Q685J3 4493 aa4.19□□□□□ -1.74
VMP1-213ENST00000591877 TRAV23DV6A0A075B6W5 121 aa4.19□□□□□ -1.74
VMP1-213ENST00000591877 H0YGX0 51 aa4.19□□□□□ -1.74
VMP1-213ENST00000591877 S100A7L2Q5SY68 101 aa4.19□□□□□ -1.74
VMP1-213ENST00000591877 CBY1Q9Y3M2 126 aa4.19□□□□□ -1.74
VMP1-213ENST00000591877 H3BT86 120 aa4.18□□□□□ -1.74
VMP1-213ENST00000591877 ZNF73O43830 326 aaPredicted RBP4.18□□□□□ -1.74
VMP1-213ENST00000591877 SPINK1P00995 79 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms