RNA–Protein interactions for RNA: ENST00000590874.5

CAPNS1-211, Transcript of calpain small subunit 1, humanhuman

TSL 5 BASIC

Gene CAPNS1, Length 926 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-211ENST00000590874 HRCT1Q6UXD1 115 aa13.92□□□□□ -0.18
CAPNS1-211ENST00000590874 CFC1BP0CG36 223 aa13.91□□□□□ -0.18
CAPNS1-211ENST00000590874 LIMD2Q9BT23 127 aa13.9□□□□□ -0.18
CAPNS1-211ENST00000590874 A0A1B0GWB2 263 aa13.89□□□□□ -0.19
CAPNS1-211ENST00000590874 A4D1N5 150 aa13.88□□□□□ -0.19
CAPNS1-211ENST00000590874 NHP2Q9NX24 153 aaKnown RBP13.88□□□□□ -0.19
CAPNS1-211ENST00000590874 SPRR1BP22528 89 aa13.87□□□□□ -0.19
CAPNS1-211ENST00000590874 LORP23490 312 aaPredicted RBP13.86□□□□□ -0.19
CAPNS1-211ENST00000590874 A0A0B4J2C4 111 aa13.85□□□□□ -0.19
CAPNS1-211ENST00000590874 KRTAP10-6P60371 365 aaPredicted RBP13.84□□□□□ -0.19
CAPNS1-211ENST00000590874 CFC1P0CG37 223 aa13.81□□□□□ -0.2
CAPNS1-211ENST00000590874 RAB37Q96AX2 223 aa13.8□□□□□ -0.2
CAPNS1-211ENST00000590874 K7ERJ3 54 aa13.79□□□□□ -0.2
CAPNS1-211ENST00000590874 LAMTOR3Q9UHA4 124 aa13.79□□□□□ -0.2
CAPNS1-211ENST00000590874 CBY1Q9Y3M2 126 aa13.79□□□□□ -0.2
CAPNS1-211ENST00000590874 TAX1BP3O14907 124 aa13.78□□□□□ -0.2
CAPNS1-211ENST00000590874 DHRS4-AS1Q9P1J3 65 aa13.78□□□□□ -0.2
CAPNS1-211ENST00000590874 PRO1854Q9UHT4 67 aa13.78□□□□□ -0.2
CAPNS1-211ENST00000590874 OR13C6PQ8NH95 151 aa13.76□□□□□ -0.21
CAPNS1-211ENST00000590874 TRAV13-2A0A0B4J235 113 aa13.73□□□□□ -0.21
CAPNS1-211ENST00000590874 C9orf118A6NHY6 69 aa13.73□□□□□ -0.21
CAPNS1-211ENST00000590874 Q1RN00 199 aa13.73□□□□□ -0.21
CAPNS1-211ENST00000590874 H7C2G1 150 aa13.72□□□□□ -0.21
CAPNS1-211ENST00000590874 CD164Q04900 197 aa13.72□□□□□ -0.21
CAPNS1-211ENST00000590874 ELOF1P60002 83 aaKnown RBP13.7□□□□□ -0.22
CAPNS1-211ENST00000590874 M0R2T5 61 aa13.69□□□□□ -0.22
CAPNS1-211ENST00000590874 DEFB105AQ8NG35 78 aa13.69□□□□□ -0.22
CAPNS1-211ENST00000590874 COX7BP24311 80 aa13.68□□□□□ -0.22
CAPNS1-211ENST00000590874 C6orf99Q4VX62 202 aa13.67□□□□□ -0.22
CAPNS1-211ENST00000590874 H3BUT2 72 aa13.66□□□□□ -0.22
CAPNS1-211ENST00000590874 RPL37P61927 97 aaKnown RBP13.66□□□□□ -0.22
CAPNS1-211ENST00000590874 C1orf195Q5TG92 126 aa13.66□□□□□ -0.22
CAPNS1-211ENST00000590874 Q5XG85 94 aa13.66□□□□□ -0.22
CAPNS1-211ENST00000590874 LYRM7Q5U5X0 104 aa13.64□□□□□ -0.23
CAPNS1-211ENST00000590874 A0A0G2JQZ4 141 aa13.63□□□□□ -0.23
CAPNS1-211ENST00000590874 TEX49A0A1B0GTD5 131 aa13.63□□□□□ -0.23
CAPNS1-211ENST00000590874 SMIM29Q86T20 159 aa13.63□□□□□ -0.23
CAPNS1-211ENST00000590874 FLGP20930 4061 aaPredicted RBP13.62□□□□□ -0.23
CAPNS1-211ENST00000590874 A0A1W2PPM0 123 aa13.62□□□□□ -0.23
CAPNS1-211ENST00000590874 COX6B2Q6YFQ2 88 aa13.62□□□□□ -0.23
CAPNS1-211ENST00000590874 A0A1B0GV90 55 aa13.61□□□□□ -0.23
CAPNS1-211ENST00000590874 FABP2P12104 132 aa13.6□□□□□ -0.23
CAPNS1-211ENST00000590874 PSMB2P49721 201 aa13.59□□□□□ -0.23
CAPNS1-211ENST00000590874 NAA38Q9BRA0 125 aaKnown RBP13.59□□□□□ -0.23
CAPNS1-211ENST00000590874 COX6CP09669 75 aa13.57□□□□□ -0.24
CAPNS1-211ENST00000590874 VAMP3Q15836 100 aa13.55□□□□□ -0.24
CAPNS1-211ENST00000590874 TRIAP1O43715 76 aa13.54□□□□□ -0.24
CAPNS1-211ENST00000590874 IGLV5-48A0A075B6I7 105 aa13.53□□□□□ -0.24
CAPNS1-211ENST00000590874 SMIM11BQ8TCY0 68 aa13.53□□□□□ -0.24
CAPNS1-211ENST00000590874 TRBV7-6A0A0J9YX20 115 aa13.52□□□□□ -0.25
CAPNS1-211ENST00000590874 SPCS1Q9Y6A9 102 aa13.52□□□□□ -0.25
CAPNS1-211ENST00000590874 SCGB1C2P0DMR2 95 aa13.51□□□□□ -0.25
CAPNS1-211ENST00000590874 GTF2H5Q6ZYL4 71 aa13.51□□□□□ -0.25
CAPNS1-211ENST00000590874 TRBV20-1A0A075B6N2 111 aa13.5□□□□□ -0.25
CAPNS1-211ENST00000590874 K7EP34 96 aa13.5□□□□□ -0.25
CAPNS1-211ENST00000590874 H0YGX0 51 aa13.46□□□□□ -0.25
CAPNS1-211ENST00000590874 TCL1BO95988 128 aa13.43□□□□□ -0.26
CAPNS1-211ENST00000590874 ATXN8Q156A1 80 aa13.43□□□□□ -0.26
CAPNS1-211ENST00000590874 UBE2V1Q13404 147 aa13.42□□□□□ -0.26
CAPNS1-211ENST00000590874 LST1O00453 97 aa13.4□□□□□ -0.26
CAPNS1-211ENST00000590874 CLEC2BQ92478 149 aa13.38□□□□□ -0.27
CAPNS1-211ENST00000590874 A0A1B0GX51 115 aa13.37□□□□□ -0.27
CAPNS1-211ENST00000590874 TRACP01848 142 aa13.36□□□□□ -0.27
CAPNS1-211ENST00000590874 H3BMG7 143 aa13.35□□□□□ -0.27
CAPNS1-211ENST00000590874 Q6Q795 121 aa13.35□□□□□ -0.27
CAPNS1-211ENST00000590874 SNCGO76070 127 aa13.33□□□□□ -0.28
CAPNS1-211ENST00000590874 FAM218AQ96MZ4 157 aa13.32□□□□□ -0.28
CAPNS1-211ENST00000590874 F8WEM9 126 aa13.3□□□□□ -0.28
CAPNS1-211ENST00000590874 LINC00575Q6W349 94 aa13.29□□□□□ -0.28
CAPNS1-211ENST00000590874 KRTAP9-1A8MXZ3 250 aaPredicted RBP13.28□□□□□ -0.28
CAPNS1-211ENST00000590874 DNAL4O96015 105 aa13.28□□□□□ -0.28
CAPNS1-211ENST00000590874 OBSCN-AS1Q96MR7 158 aa13.28□□□□□ -0.28
CAPNS1-211ENST00000590874 F8W1H4 67 aa13.27□□□□□ -0.29
CAPNS1-211ENST00000590874 ATP11AUNQ6ZP68 121 aa13.27□□□□□ -0.29
CAPNS1-211ENST00000590874 Q75L30 129 aa13.27□□□□□ -0.29
CAPNS1-211ENST00000590874 C9JAW5 83 aa13.26□□□□□ -0.29
CAPNS1-211ENST00000590874 TRBV7-7A0A0K0K1E9 115 aa13.25□□□□□ -0.29
CAPNS1-211ENST00000590874 KRTAP9-7A8MTY7 169 aa13.25□□□□□ -0.29
CAPNS1-211ENST00000590874 PRO0461Q9UI25 63 aa13.25□□□□□ -0.29
CAPNS1-211ENST00000590874 hADV29S1A0JD25 119 aa13.24□□□□□ -0.29
CAPNS1-211ENST00000590874 H3BT86 120 aa13.23□□□□□ -0.29
CAPNS1-211ENST00000590874 IGFL1Q6UW32 110 aa13.23□□□□□ -0.29
CAPNS1-211ENST00000590874 USH2AO75445 5202 aa13.21□□□□□ -0.29
CAPNS1-211ENST00000590874 SSPOA2VEC9 5147 aa13.21□□□□□ -0.29
CAPNS1-211ENST00000590874 Q6JHZ5 121 aa13.21□□□□□ -0.29
CAPNS1-211ENST00000590874 Q6ZQY7 126 aa13.2□□□□□ -0.3
CAPNS1-211ENST00000590874 KRTAP9-8Q9BYQ0 159 aa13.2□□□□□ -0.3
CAPNS1-211ENST00000590874 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.19□□□□□ -0.3
CAPNS1-211ENST00000590874 H3BQ85 93 aa13.18□□□□□ -0.3
CAPNS1-211ENST00000590874 GHRHP01286 108 aa13.18□□□□□ -0.3
CAPNS1-211ENST00000590874 MTURNQ8N3F0 131 aa13.18□□□□□ -0.3
CAPNS1-211ENST00000590874 ANKRD29Q8N6D5 301 aa13.18□□□□□ -0.3
CAPNS1-211ENST00000590874 ORMDL1Q9P0S3 153 aa13.18□□□□□ -0.3
CAPNS1-211ENST00000590874 OCIAD2Q56VL3 154 aa13.17□□□□□ -0.3
CAPNS1-211ENST00000590874 SMCPP49901 116 aaPredicted RBP13.16□□□□□ -0.3
CAPNS1-211ENST00000590874 BAALC-AS2P0C853 105 aa13.14□□□□□ -0.31
CAPNS1-211ENST00000590874 Q96NJ1 140 aa13.12□□□□□ -0.31
CAPNS1-211ENST00000590874 TMEM256-PLSCR3K7ERE1 68 aa13.1□□□□□ -0.31
CAPNS1-211ENST00000590874 PPDPFLQ8WWR9 84 aa13.09□□□□□ -0.31
CAPNS1-211ENST00000590874 TEN1Q86WV5 123 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms