RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 BVES-AS1Q5T3Y7 98 aa12.39□□□□□ -0.43
MBD3-208ENST00000590830 RAB37Q96AX2 223 aa12.39□□□□□ -0.43
MBD3-208ENST00000590830 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.36□□□□□ -0.43
MBD3-208ENST00000590830 FXYD2P54710 66 aa12.35□□□□□ -0.43
MBD3-208ENST00000590830 Q5XG85 94 aa12.34□□□□□ -0.43
MBD3-208ENST00000590830 FAM218AQ96MZ4 157 aa12.32□□□□□ -0.44
MBD3-208ENST00000590830 IGLV8-61A0A075B6I0 122 aa12.31□□□□□ -0.44
MBD3-208ENST00000590830 ASB16-AS1Q495Z4 193 aa12.31□□□□□ -0.44
MBD3-208ENST00000590830 PRO1854Q9UHT4 67 aa12.31□□□□□ -0.44
MBD3-208ENST00000590830 FAT4Q6V0I7 4981 aa12.31□□□□□ -0.44
MBD3-208ENST00000590830 F8WEM9 126 aa12.3□□□□□ -0.44
MBD3-208ENST00000590830 OCIAD2Q56VL3 154 aa12.29□□□□□ -0.44
MBD3-208ENST00000590830 C1orf195Q5TG92 126 aa12.29□□□□□ -0.44
MBD3-208ENST00000590830 H0YGX0 51 aa12.28□□□□□ -0.44
MBD3-208ENST00000590830 XP32Q5T750 250 aa12.28□□□□□ -0.44
MBD3-208ENST00000590830 TMEM238LA0A1B0GVL6 79 aa12.27□□□□□ -0.45
MBD3-208ENST00000590830 A6NJY4 79 aa12.27□□□□□ -0.45
MBD3-208ENST00000590830 IGFL1Q6UW32 110 aa12.26□□□□□ -0.45
MBD3-208ENST00000590830 PPDPFLQ8WWR9 84 aa12.26□□□□□ -0.45
MBD3-208ENST00000590830 HSD52Q0P140 79 aa12.25□□□□□ -0.45
MBD3-208ENST00000590830 Q6JHZ5 121 aa12.24□□□□□ -0.45
MBD3-208ENST00000590830 SNHG12Q9BXW3 62 aa12.24□□□□□ -0.45
MBD3-208ENST00000590830 KRTAP4-1Q9BYQ7 146 aa12.24□□□□□ -0.45
MBD3-208ENST00000590830 C9orf92A6NGG3 77 aa12.22□□□□□ -0.45
MBD3-208ENST00000590830 CLEC2BQ92478 149 aa12.22□□□□□ -0.45
MBD3-208ENST00000590830 H3BUT2 72 aa12.21□□□□□ -0.45
MBD3-208ENST00000590830 TRIAP1O43715 76 aa12.21□□□□□ -0.45
MBD3-208ENST00000590830 SEC61BP60468 96 aaKnown RBP12.21□□□□□ -0.45
MBD3-208ENST00000590830 UQCR10Q9UDW1 63 aa12.21□□□□□ -0.45
MBD3-208ENST00000590830 A0A0U1RQV1 116 aa12.2□□□□□ -0.46
MBD3-208ENST00000590830 K7ERJ3 54 aa12.2□□□□□ -0.46
MBD3-208ENST00000590830 TRBV7-7A0A0K0K1E9 115 aa12.18□□□□□ -0.46
MBD3-208ENST00000590830 SNCGO76070 127 aa12.18□□□□□ -0.46
MBD3-208ENST00000590830 TCL1BO95988 128 aa12.18□□□□□ -0.46
MBD3-208ENST00000590830 A0A1B0GX51 115 aa12.16□□□□□ -0.46
MBD3-208ENST00000590830 NDUFV3P56181 108 aaKnown RBP12.14□□□□□ -0.47
MBD3-208ENST00000590830 LCE2AQ5TA79 106 aaPredicted RBP12.12□□□□□ -0.47
MBD3-208ENST00000590830 PSMB2P49721 201 aa12.09□□□□□ -0.47
MBD3-208ENST00000590830 FABP2P12104 132 aa12.08□□□□□ -0.48
MBD3-208ENST00000590830 H3BMG7 143 aa12.06□□□□□ -0.48
MBD3-208ENST00000590830 PCOTHQ58A44 107 aa12.06□□□□□ -0.48
MBD3-208ENST00000590830 Q6Q795 121 aa12.06□□□□□ -0.48
MBD3-208ENST00000590830 GHRHP01286 108 aa12.03□□□□□ -0.48
MBD3-208ENST00000590830 COX6CP09669 75 aa12.02□□□□□ -0.49
MBD3-208ENST00000590830 TEN1Q86WV5 123 aa12.02□□□□□ -0.49
MBD3-208ENST00000590830 ORMDL1Q9P0S3 153 aa12□□□□□ -0.49
MBD3-208ENST00000590830 LST1O00453 97 aa11.99□□□□□ -0.49
MBD3-208ENST00000590830 DNAL4O96015 105 aa11.99□□□□□ -0.49
MBD3-208ENST00000590830 A0A1W2PNM2 257 aa11.98□□□□□ -0.49
MBD3-208ENST00000590830 RPL37P61927 97 aaKnown RBP11.97□□□□□ -0.49
MBD3-208ENST00000590830 A0A087WSZ3 146 aa11.95□□□□□ -0.5
MBD3-208ENST00000590830 A0A1B0GV72 72 aa11.94□□□□□ -0.5
MBD3-208ENST00000590830 H3BQ85 93 aa11.94□□□□□ -0.5
MBD3-208ENST00000590830 TMEM256-PLSCR3K7ERE1 68 aa11.94□□□□□ -0.5
MBD3-208ENST00000590830 SMIM6P0DI80 62 aa11.94□□□□□ -0.5
MBD3-208ENST00000590830 SCGB1C2P0DMR2 95 aa11.93□□□□□ -0.5
MBD3-208ENST00000590830 SS18L2Q9UHA2 77 aa11.93□□□□□ -0.5
MBD3-208ENST00000590830 TRACP01848 142 aa11.92□□□□□ -0.5
MBD3-208ENST00000590830 ANKRD29Q8N6D5 301 aa11.91□□□□□ -0.5
MBD3-208ENST00000590830 Q96NJ1 140 aa11.91□□□□□ -0.5
MBD3-208ENST00000590830 KRTAP19-2Q3LHN2 52 aa11.9□□□□□ -0.5
MBD3-208ENST00000590830 OBSCN-AS1Q96MR7 158 aa11.9□□□□□ -0.5
MBD3-208ENST00000590830 UBE2V1Q13404 147 aa11.89□□□□□ -0.51
MBD3-208ENST00000590830 LCE2CQ5TA81 110 aa11.89□□□□□ -0.51
MBD3-208ENST00000590830 M0R143 59 aa11.87□□□□□ -0.51
MBD3-208ENST00000590830 TRBV7-4A0A0J9YYF1 115 aa11.85□□□□□ -0.51
MBD3-208ENST00000590830 NAA38Q9BRA0 125 aaKnown RBP11.85□□□□□ -0.51
MBD3-208ENST00000590830 LOC105371267A0A1B0GV96 52 aa11.84□□□□□ -0.51
MBD3-208ENST00000590830 BAALC-AS2P0C853 105 aa11.81□□□□□ -0.52
MBD3-208ENST00000590830 Q75L30 129 aa11.8□□□□□ -0.52
MBD3-208ENST00000590830 CCKP06307 115 aa11.79□□□□□ -0.52
MBD3-208ENST00000590830 RBM3P98179 157 aaKnown RBP11.76□□□□□ -0.53
MBD3-208ENST00000590830 TSTD3H0UI37 97 aa11.74□□□□□ -0.53
MBD3-208ENST00000590830 LINC00472Q9H8W2 130 aa11.74□□□□□ -0.53
MBD3-208ENST00000590830 DSCR10P59022 87 aa11.73□□□□□ -0.53
MBD3-208ENST00000590830 ATXN8Q156A1 80 aa11.73□□□□□ -0.53
MBD3-208ENST00000590830 DEFB116Q30KQ4 102 aa11.73□□□□□ -0.53
MBD3-208ENST00000590830 C20orf166-AS1Q96NR2 134 aa11.73□□□□□ -0.53
MBD3-208ENST00000590830 SIGMAR1Q99720 223 aa11.73□□□□□ -0.53
MBD3-208ENST00000590830 IGKV4-1P06312 121 aa11.72□□□□□ -0.53
MBD3-208ENST00000590830 A8MUU9 505 aa11.71□□□□□ -0.53
MBD3-208ENST00000590830 ATP11AUNQ6ZP68 121 aa11.71□□□□□ -0.53
MBD3-208ENST00000590830 DSCR8Q96T75 97 aa11.71□□□□□ -0.53
MBD3-208ENST00000590830 VPS25Q9BRG1 176 aa11.7□□□□□ -0.54
MBD3-208ENST00000590830 MT1HP80294 61 aa11.69□□□□□ -0.54
MBD3-208ENST00000590830 BATFQ16520 125 aa11.69□□□□□ -0.54
MBD3-208ENST00000590830 NOTCH2NLQ7Z3S9 236 aa11.67□□□□□ -0.54
MBD3-208ENST00000590830 KRTAP9-2Q9BYQ4 174 aa11.67□□□□□ -0.54
MBD3-208ENST00000590830 C9JAW5 83 aa11.66□□□□□ -0.54
MBD3-208ENST00000590830 KRTAP16-1A8MUX0 517 aa11.64□□□□□ -0.55
MBD3-208ENST00000590830 LINC00313P59037 77 aa11.64□□□□□ -0.55
MBD3-208ENST00000590830 TRBV20-1A0A075B6N2 111 aa11.59□□□□□ -0.55
MBD3-208ENST00000590830 JMJD7-PLA2G4BH0Y9G9 81 aa11.59□□□□□ -0.55
MBD3-208ENST00000590830 TAX1BP3O14907 124 aa11.59□□□□□ -0.55
MBD3-208ENST00000590830 Q6ZQT0 140 aa11.59□□□□□ -0.55
MBD3-208ENST00000590830 C9orf118A6NHY6 69 aa11.58□□□□□ -0.56
MBD3-208ENST00000590830 LYRM7Q5U5X0 104 aa11.58□□□□□ -0.56
MBD3-208ENST00000590830 LOC110117498A0A087WWA1 95 aa11.57□□□□□ -0.56
MBD3-208ENST00000590830 IGHV6-1A0A0B4J1U7 121 aa11.57□□□□□ -0.56
MBD3-208ENST00000590830 FLGP20930 4061 aaPredicted RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms