RNA–Protein interactions for RNA: ENST00000590630.5

LIG3-213, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-213ENST00000590630 SLC25A20O43772 301 aa6.86□□□□□ -1.31
LIG3-213ENST00000590630 C9orf153Q5TBE3 101 aa6.86□□□□□ -1.31
LIG3-213ENST00000590630 A0A0B4J2C4 111 aa6.85□□□□□ -1.31
LIG3-213ENST00000590630 TEX49A0A1B0GTD5 131 aa6.85□□□□□ -1.31
LIG3-213ENST00000590630 A6NJY4 79 aa6.85□□□□□ -1.31
LIG3-213ENST00000590630 SPINK1P00995 79 aa6.85□□□□□ -1.31
LIG3-213ENST00000590630 CFC1BP0CG36 223 aa6.85□□□□□ -1.31
LIG3-213ENST00000590630 CFC1P0CG37 223 aa6.85□□□□□ -1.31
LIG3-213ENST00000590630 CEND1Q8N111 149 aa6.85□□□□□ -1.31
LIG3-213ENST00000590630 RAB37Q96AX2 223 aa6.85□□□□□ -1.31
LIG3-213ENST00000590630 LAMTOR3Q9UHA4 124 aa6.85□□□□□ -1.31
LIG3-213ENST00000590630 IGLV5-48A0A075B6I7 105 aa6.84□□□□□ -1.31
LIG3-213ENST00000590630 DEFB105AQ8NG35 78 aa6.84□□□□□ -1.31
LIG3-213ENST00000590630 RPS29P62273 56 aaKnown RBP6.83□□□□□ -1.32
LIG3-213ENST00000590630 LINC00575Q6W349 94 aa6.83□□□□□ -1.32
LIG3-213ENST00000590630 LPAP08519 4548 aa6.82□□□□□ -1.32
LIG3-213ENST00000590630 LINC01547P58512 204 aaPredicted RBP6.82□□□□□ -1.32
LIG3-213ENST00000590630 hADV29S1A0JD25 119 aa6.81□□□□□ -1.32
LIG3-213ENST00000590630 H7C2G1 150 aa6.81□□□□□ -1.32
LIG3-213ENST00000590630 Q1RN00 199 aa6.81□□□□□ -1.32
LIG3-213ENST00000590630 RETNLBQ9BQ08 111 aa6.81□□□□□ -1.32
LIG3-213ENST00000590630 FXYD2P54710 66 aa6.8□□□□□ -1.32
LIG3-213ENST00000590630 PRO1854Q9UHT4 67 aa6.8□□□□□ -1.32
LIG3-213ENST00000590630 Q6ZQY7 126 aa6.79□□□□□ -1.32
LIG3-213ENST00000590630 SMIM29Q86T20 159 aa6.79□□□□□ -1.32
LIG3-213ENST00000590630 Q8N377 158 aa6.78□□□□□ -1.32
LIG3-213ENST00000590630 H0YGX0 51 aa6.77□□□□□ -1.33
LIG3-213ENST00000590630 LYRM7Q5U5X0 104 aa6.77□□□□□ -1.33
LIG3-213ENST00000590630 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.77□□□□□ -1.33
LIG3-213ENST00000590630 FP248Q71RG6 208 aaPredicted RBP6.77□□□□□ -1.33
LIG3-213ENST00000590630 IGLV7-46A0A075B6I9 117 aa6.76□□□□□ -1.33
LIG3-213ENST00000590630 SNCGO76070 127 aa6.76□□□□□ -1.33
LIG3-213ENST00000590630 LCE2DQ5TA82 110 aaPredicted RBP6.76□□□□□ -1.33
LIG3-213ENST00000590630 NAA38Q9BRA0 125 aaKnown RBP6.76□□□□□ -1.33
LIG3-213ENST00000590630 H3BMG7 143 aa6.75□□□□□ -1.33
LIG3-213ENST00000590630 CD164Q04900 197 aa6.75□□□□□ -1.33
LIG3-213ENST00000590630 TPRXLQ17RH7 258 aa6.75□□□□□ -1.33
LIG3-213ENST00000590630 PPDPFLQ8WWR9 84 aa6.75□□□□□ -1.33
LIG3-213ENST00000590630 PRO0461Q9UI25 63 aa6.75□□□□□ -1.33
LIG3-213ENST00000590630 RNF213Q63HN8 5207 aa6.75□□□□□ -1.33
LIG3-213ENST00000590630 F8WEM9 126 aa6.74□□□□□ -1.33
LIG3-213ENST00000590630 LIMD2Q9BT23 127 aa6.74□□□□□ -1.33
LIG3-213ENST00000590630 A0A1B0GX51 115 aa6.72□□□□□ -1.33
LIG3-213ENST00000590630 K7ERJ3 54 aa6.72□□□□□ -1.33
LIG3-213ENST00000590630 TRIAP1O43715 76 aa6.72□□□□□ -1.33
LIG3-213ENST00000590630 HRCT1Q6UXD1 115 aa6.72□□□□□ -1.33
LIG3-213ENST00000590630 FAM218AQ96MZ4 157 aa6.71□□□□□ -1.34
LIG3-213ENST00000590630 IGLV8-61A0A075B6I0 122 aa6.7□□□□□ -1.34
LIG3-213ENST00000590630 ETDBQ3ZM63 59 aa6.7□□□□□ -1.34
LIG3-213ENST00000590630 Q6JHZ5 121 aa6.7□□□□□ -1.34
LIG3-213ENST00000590630 TRBV20-1A0A075B6N2 111 aa6.69□□□□□ -1.34
LIG3-213ENST00000590630 GHRHP01286 108 aa6.69□□□□□ -1.34
LIG3-213ENST00000590630 COX6CP09669 75 aa6.69□□□□□ -1.34
LIG3-213ENST00000590630 PSMB2P49721 201 aa6.69□□□□□ -1.34
LIG3-213ENST00000590630 CDIP1Q9H305 208 aa6.69□□□□□ -1.34
LIG3-213ENST00000590630 Q5XG85 94 aa6.68□□□□□ -1.34
LIG3-213ENST00000590630 A0A0G2JQZ4 141 aa6.67□□□□□ -1.34
LIG3-213ENST00000590630 KRTAP13-3Q3SY46 172 aa6.67□□□□□ -1.34
LIG3-213ENST00000590630 CLEC2BQ92478 149 aa6.67□□□□□ -1.34
LIG3-213ENST00000590630 TEN1Q86WV5 123 aa6.66□□□□□ -1.34
LIG3-213ENST00000590630 DNAL4O96015 105 aa6.65□□□□□ -1.34
LIG3-213ENST00000590630 IGFL1Q6UW32 110 aa6.65□□□□□ -1.34
LIG3-213ENST00000590630 NDUFV3P56181 108 aaKnown RBP6.64□□□□□ -1.35
LIG3-213ENST00000590630 H3BQ85 93 aa6.63□□□□□ -1.35
LIG3-213ENST00000590630 TCL1BO95988 128 aa6.63□□□□□ -1.35
LIG3-213ENST00000590630 SMCPP49901 116 aaPredicted RBP6.63□□□□□ -1.35
LIG3-213ENST00000590630 Q6Q795 121 aa6.63□□□□□ -1.35
LIG3-213ENST00000590630 ORMDL1Q9P0S3 153 aa6.62□□□□□ -1.35
LIG3-213ENST00000590630 MUC2Q02817 5179 aa6.61□□□□□ -1.35
LIG3-213ENST00000590630 TRBV7-7A0A0K0K1E9 115 aa6.61□□□□□ -1.35
LIG3-213ENST00000590630 SCGB1C2P0DMR2 95 aa6.61□□□□□ -1.35
LIG3-213ENST00000590630 MT-ATP8P03928 68 aa6.6□□□□□ -1.35
LIG3-213ENST00000590630 C1orf195Q5TG92 126 aa6.6□□□□□ -1.35
LIG3-213ENST00000590630 ANAPC13Q9BS18 74 aa6.6□□□□□ -1.35
LIG3-213ENST00000590630 TMEM256-PLSCR3K7ERE1 68 aa6.59□□□□□ -1.35
LIG3-213ENST00000590630 TRACP01848 142 aa6.59□□□□□ -1.35
LIG3-213ENST00000590630 ASB16-AS1Q495Z4 193 aa6.59□□□□□ -1.35
LIG3-213ENST00000590630 LST1O00453 97 aa6.58□□□□□ -1.36
LIG3-213ENST00000590630 ANKRD29Q8N6D5 301 aa6.56□□□□□ -1.36
LIG3-213ENST00000590630 XP32Q5T750 250 aa6.55□□□□□ -1.36
LIG3-213ENST00000590630 SS18L2Q9UHA2 77 aa6.55□□□□□ -1.36
LIG3-213ENST00000590630 ATXN8Q156A1 80 aa6.54□□□□□ -1.36
LIG3-213ENST00000590630 FAM240AA0A1B0GVK7 77 aa6.53□□□□□ -1.36
LIG3-213ENST00000590630 SEC61BP60468 96 aaKnown RBP6.53□□□□□ -1.36
LIG3-213ENST00000590630 C9orf92A6NGG3 77 aa6.52□□□□□ -1.37
LIG3-213ENST00000590630 MUC17Q685J3 4493 aa6.51□□□□□ -1.37
LIG3-213ENST00000590630 C9JAW5 83 aa6.51□□□□□ -1.37
LIG3-213ENST00000590630 H3BT86 120 aa6.51□□□□□ -1.37
LIG3-213ENST00000590630 A0A087WSZ3 146 aa6.5□□□□□ -1.37
LIG3-213ENST00000590630 TRBV7-4A0A0J9YYF1 115 aa6.5□□□□□ -1.37
LIG3-213ENST00000590630 A0A1W2PNM2 257 aa6.5□□□□□ -1.37
LIG3-213ENST00000590630 BAALC-AS2P0C853 105 aa6.5□□□□□ -1.37
LIG3-213ENST00000590630 A0A0U1RQV1 116 aa6.49□□□□□ -1.37
LIG3-213ENST00000590630 ACYP1P07311 99 aa6.48□□□□□ -1.37
LIG3-213ENST00000590630 RBM3P98179 157 aaKnown RBP6.48□□□□□ -1.37
LIG3-213ENST00000590630 IMUPQ9GZP8 106 aa6.48□□□□□ -1.37
LIG3-213ENST00000590630 CCKP06307 115 aa6.47□□□□□ -1.37
LIG3-213ENST00000590630 DSCR8Q96T75 97 aa6.47□□□□□ -1.37
LIG3-213ENST00000590630 Q96NJ1 140 aa6.44□□□□□ -1.38
LIG3-213ENST00000590630 JMJD7-PLA2G4BH0Y9G9 81 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 140.8 ms