RNA–Protein interactions for RNA: ENST00000590315.5

DDX39A-213, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 566 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-213ENST00000590315 Q8NBF4 154 aa7.55□□□□□ -1.2
DDX39A-213ENST00000590315 A0A1B0GX51 115 aa7.54□□□□□ -1.2
DDX39A-213ENST00000590315 Q8N377 158 aa7.54□□□□□ -1.2
DDX39A-213ENST00000590315 LINC01547P58512 204 aaPredicted RBP7.53□□□□□ -1.2
DDX39A-213ENST00000590315 H3BUT2 72 aa7.52□□□□□ -1.21
DDX39A-213ENST00000590315 OCIAD2Q56VL3 154 aa7.52□□□□□ -1.21
DDX39A-213ENST00000590315 LYRM7Q5U5X0 104 aa7.52□□□□□ -1.21
DDX39A-213ENST00000590315 SNHG12Q9BXW3 62 aa7.52□□□□□ -1.21
DDX39A-213ENST00000590315 GHRHP01286 108 aa7.51□□□□□ -1.21
DDX39A-213ENST00000590315 FABP2P12104 132 aa7.51□□□□□ -1.21
DDX39A-213ENST00000590315 SSBP3-AS1Q7Z2R9 100 aa7.5□□□□□ -1.21
DDX39A-213ENST00000590315 SMIM29Q86T20 159 aa7.5□□□□□ -1.21
DDX39A-213ENST00000590315 PPDPFLQ8WWR9 84 aa7.5□□□□□ -1.21
DDX39A-213ENST00000590315 ORMDL1Q9P0S3 153 aa7.5□□□□□ -1.21
DDX39A-213ENST00000590315 LST1O00453 97 aa7.49□□□□□ -1.21
DDX39A-213ENST00000590315 HRCT1Q6UXD1 115 aa7.49□□□□□ -1.21
DDX39A-213ENST00000590315 C9orf118A6NHY6 69 aa7.48□□□□□ -1.21
DDX39A-213ENST00000590315 TAX1BP3O14907 124 aa7.48□□□□□ -1.21
DDX39A-213ENST00000590315 ATXN8Q156A1 80 aa7.48□□□□□ -1.21
DDX39A-213ENST00000590315 A0A1B0GV72 72 aa7.47□□□□□ -1.21
DDX39A-213ENST00000590315 TCL1BO95988 128 aa7.47□□□□□ -1.21
DDX39A-213ENST00000590315 TRACP01848 142 aa7.47□□□□□ -1.21
DDX39A-213ENST00000590315 COL5A1-AS1Q5SY13 56 aa7.47□□□□□ -1.21
DDX39A-213ENST00000590315 SPAG11AQ6PDA7 123 aa7.47□□□□□ -1.21
DDX39A-213ENST00000590315 A0A0G2JQZ4 141 aa7.44□□□□□ -1.22
DDX39A-213ENST00000590315 A0A1W2PPM0 123 aa7.44□□□□□ -1.22
DDX39A-213ENST00000590315 H3BQ85 93 aa7.44□□□□□ -1.22
DDX39A-213ENST00000590315 NDUFV3P56181 108 aaKnown RBP7.44□□□□□ -1.22
DDX39A-213ENST00000590315 TMEM256-PLSCR3K7ERE1 68 aa7.43□□□□□ -1.22
DDX39A-213ENST00000590315 SPINK1P00995 79 aa7.43□□□□□ -1.22
DDX39A-213ENST00000590315 TRBV20-1A0A075B6N2 111 aa7.42□□□□□ -1.22
DDX39A-213ENST00000590315 H3BMG7 143 aa7.42□□□□□ -1.22
DDX39A-213ENST00000590315 Q6JHZ5 121 aa7.42□□□□□ -1.22
DDX39A-213ENST00000590315 RETNLBQ9BQ08 111 aa7.42□□□□□ -1.22
DDX39A-213ENST00000590315 PRR4Q16378 134 aa7.41□□□□□ -1.22
DDX39A-213ENST00000590315 C9JAW5 83 aa7.4□□□□□ -1.22
DDX39A-213ENST00000590315 BAALC-AS2P0C853 105 aa7.4□□□□□ -1.22
DDX39A-213ENST00000590315 IGFL1Q6UW32 110 aa7.4□□□□□ -1.22
DDX39A-213ENST00000590315 LIMD2Q9BT23 127 aa7.39□□□□□ -1.23
DDX39A-213ENST00000590315 SPCS1Q9Y6A9 102 aa7.39□□□□□ -1.23
DDX39A-213ENST00000590315 IGLV8-61A0A075B6I0 122 aa7.38□□□□□ -1.23
DDX39A-213ENST00000590315 ANKRD29Q8N6D5 301 aa7.38□□□□□ -1.23
DDX39A-213ENST00000590315 CD164Q04900 197 aa7.37□□□□□ -1.23
DDX39A-213ENST00000590315 UBE2V1Q13404 147 aa7.37□□□□□ -1.23
DDX39A-213ENST00000590315 HERC1Q15751 4861 aa7.36□□□□□ -1.23
DDX39A-213ENST00000590315 MTURNQ8N3F0 131 aa7.36□□□□□ -1.23
DDX39A-213ENST00000590315 RPS29P62273 56 aaKnown RBP7.35□□□□□ -1.23
DDX39A-213ENST00000590315 VPS25Q9BRG1 176 aa7.33□□□□□ -1.24
DDX39A-213ENST00000590315 TRBV7-7A0A0K0K1E9 115 aa7.32□□□□□ -1.24
DDX39A-213ENST00000590315 RBM3P98179 157 aaKnown RBP7.32□□□□□ -1.24
DDX39A-213ENST00000590315 DSCR8Q96T75 97 aa7.32□□□□□ -1.24
DDX39A-213ENST00000590315 K7EP34 96 aa7.31□□□□□ -1.24
DDX39A-213ENST00000590315 H3BT86 120 aa7.3□□□□□ -1.24
DDX39A-213ENST00000590315 GTF2H5Q6ZYL4 71 aa7.3□□□□□ -1.24
DDX39A-213ENST00000590315 TEN1Q86WV5 123 aa7.3□□□□□ -1.24
DDX39A-213ENST00000590315 IGLV7-46A0A075B6I9 117 aa7.29□□□□□ -1.24
DDX39A-213ENST00000590315 JMJD7-PLA2G4BH0Y9G9 81 aa7.29□□□□□ -1.24
DDX39A-213ENST00000590315 CCKP06307 115 aa7.29□□□□□ -1.24
DDX39A-213ENST00000590315 A0A087WSZ3 146 aa7.27□□□□□ -1.25
DDX39A-213ENST00000590315 A0A1W2PNM2 257 aa7.27□□□□□ -1.25
DDX39A-213ENST00000590315 FP248Q71RG6 208 aaPredicted RBP7.27□□□□□ -1.25
DDX39A-213ENST00000590315 SS18L2Q9UHA2 77 aa7.27□□□□□ -1.25
DDX39A-213ENST00000590315 Q6Q795 121 aa7.26□□□□□ -1.25
DDX39A-213ENST00000590315 C14orf132Q9NPU4 83 aa7.26□□□□□ -1.25
DDX39A-213ENST00000590315 TRBV7-4A0A0J9YYF1 115 aa7.25□□□□□ -1.25
DDX39A-213ENST00000590315 Q5XG85 94 aa7.24□□□□□ -1.25
DDX39A-213ENST00000590315 HMCN2Q8NDA2 5059 aa7.22□□□□□ -1.25
DDX39A-213ENST00000590315 C1orf195Q5TG92 126 aa7.22□□□□□ -1.25
DDX39A-213ENST00000590315 Q6ZQT0 140 aa7.21□□□□□ -1.26
DDX39A-213ENST00000590315 CDIP1Q9H305 208 aa7.21□□□□□ -1.26
DDX39A-213ENST00000590315 LOC110117498A0A087WWA1 95 aa7.2□□□□□ -1.26
DDX39A-213ENST00000590315 PDE6GP18545 87 aa7.2□□□□□ -1.26
DDX39A-213ENST00000590315 SMCPP49901 116 aaPredicted RBP7.2□□□□□ -1.26
DDX39A-213ENST00000590315 ASB16-AS1Q495Z4 193 aa7.19□□□□□ -1.26
DDX39A-213ENST00000590315 PRO0461Q9UI25 63 aa7.19□□□□□ -1.26
DDX39A-213ENST00000590315 TPRXLQ17RH7 258 aa7.18□□□□□ -1.26
DDX39A-213ENST00000590315 OBSCN-AS1Q96MR7 158 aa7.18□□□□□ -1.26
DDX39A-213ENST00000590315 SIGMAR1Q99720 223 aa7.18□□□□□ -1.26
DDX39A-213ENST00000590315 C9orf92A6NGG3 77 aa7.17□□□□□ -1.26
DDX39A-213ENST00000590315 A0A1B0GV90 55 aa7.16□□□□□ -1.26
DDX39A-213ENST00000590315 F8W1H4 67 aa7.16□□□□□ -1.26
DDX39A-213ENST00000590315 C21orf62-AS1Q17RA5 79 aa7.16□□□□□ -1.26
DDX39A-213ENST00000590315 KRTAP13-3Q3SY46 172 aa7.15□□□□□ -1.26
DDX39A-213ENST00000590315 LPAP08519 4548 aa7.14□□□□□ -1.27
DDX39A-213ENST00000590315 IGKV4-1P06312 121 aa7.14□□□□□ -1.27
DDX39A-213ENST00000590315 DEFB116Q30KQ4 102 aa7.14□□□□□ -1.27
DDX39A-213ENST00000590315 Q96NJ1 140 aa7.12□□□□□ -1.27
DDX39A-213ENST00000590315 ETDBQ3ZM63 59 aa7.11□□□□□ -1.27
DDX39A-213ENST00000590315 A0A1B0GW54 56 aa7.1□□□□□ -1.27
DDX39A-213ENST00000590315 NREPQ16612 68 aa7.09□□□□□ -1.27
DDX39A-213ENST00000590315 LINC00472Q9H8W2 130 aa7.08□□□□□ -1.28
DDX39A-213ENST00000590315 XP32Q5T750 250 aa7.07□□□□□ -1.28
DDX39A-213ENST00000590315 LRP2P98164 4655 aa7.06□□□□□ -1.28
DDX39A-213ENST00000590315 IGHV6-1A0A0B4J1U7 121 aa7.05□□□□□ -1.28
DDX39A-213ENST00000590315 J3KT08 172 aa7.05□□□□□ -1.28
DDX39A-213ENST00000590315 DSCR10P59022 87 aa7.05□□□□□ -1.28
DDX39A-213ENST00000590315 NDUFB1O75438 58 aa7.03□□□□□ -1.28
DDX39A-213ENST00000590315 A0A1B0GVX0 72 aa7.01□□□□□ -1.29
DDX39A-213ENST00000590315 Q6ZVQ6 151 aa7.01□□□□□ -1.29
DDX39A-213ENST00000590315 UBL5Q9BZL1 73 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 189.2 ms