RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.69□□□□□ -1.34
TPM4-212ENST00000590180 CEND1Q8N111 149 aa6.69□□□□□ -1.34
TPM4-212ENST00000590180 SNHG12Q9BXW3 62 aa6.69□□□□□ -1.34
TPM4-212ENST00000590180 SNCGO76070 127 aa6.68□□□□□ -1.34
TPM4-212ENST00000590180 ASB16-AS1Q495Z4 193 aa6.68□□□□□ -1.34
TPM4-212ENST00000590180 OCIAD2Q56VL3 154 aa6.68□□□□□ -1.34
TPM4-212ENST00000590180 TMA7Q9Y2S6 64 aaKnown RBP6.68□□□□□ -1.34
TPM4-212ENST00000590180 A0A0B4J2C4 111 aa6.67□□□□□ -1.34
TPM4-212ENST00000590180 H0YGX0 51 aa6.67□□□□□ -1.34
TPM4-212ENST00000590180 PYY3Q5JQD4 70 aa6.67□□□□□ -1.34
TPM4-212ENST00000590180 MUC17Q685J3 4493 aa6.67□□□□□ -1.34
TPM4-212ENST00000590180 TMEM238LA0A1B0GVL6 79 aa6.66□□□□□ -1.34
TPM4-212ENST00000590180 C9orf92A6NGG3 77 aa6.66□□□□□ -1.34
TPM4-212ENST00000590180 A6NJY4 79 aa6.66□□□□□ -1.34
TPM4-212ENST00000590180 TCL1BO95988 128 aa6.66□□□□□ -1.34
TPM4-212ENST00000590180 Q5XG85 94 aa6.66□□□□□ -1.34
TPM4-212ENST00000590180 Q6JHZ5 121 aa6.66□□□□□ -1.34
TPM4-212ENST00000590180 PRO1854Q9UHT4 67 aa6.66□□□□□ -1.34
TPM4-212ENST00000590180 XP32Q5T750 250 aa6.65□□□□□ -1.34
TPM4-212ENST00000590180 C1orf195Q5TG92 126 aa6.65□□□□□ -1.34
TPM4-212ENST00000590180 PPDPFLQ8WWR9 84 aa6.64□□□□□ -1.35
TPM4-212ENST00000590180 FXYD2P54710 66 aa6.63□□□□□ -1.35
TPM4-212ENST00000590180 IGFL1Q6UW32 110 aa6.63□□□□□ -1.35
TPM4-212ENST00000590180 IGLV8-61A0A075B6I0 122 aa6.62□□□□□ -1.35
TPM4-212ENST00000590180 CLEC2BQ92478 149 aa6.62□□□□□ -1.35
TPM4-212ENST00000590180 FAM218AQ96MZ4 157 aa6.62□□□□□ -1.35
TPM4-212ENST00000590180 H3BUT2 72 aa6.61□□□□□ -1.35
TPM4-212ENST00000590180 TRBV7-7A0A0K0K1E9 115 aa6.6□□□□□ -1.35
TPM4-212ENST00000590180 HSD52Q0P140 79 aa6.6□□□□□ -1.35
TPM4-212ENST00000590180 FABP2P12104 132 aa6.59□□□□□ -1.35
TPM4-212ENST00000590180 KRTAP4-1Q9BYQ7 146 aa6.59□□□□□ -1.35
TPM4-212ENST00000590180 UQCR10Q9UDW1 63 aa6.59□□□□□ -1.35
TPM4-212ENST00000590180 A0A1B0GX51 115 aa6.58□□□□□ -1.36
TPM4-212ENST00000590180 GHRHP01286 108 aa6.58□□□□□ -1.36
TPM4-212ENST00000590180 PSMB2P49721 201 aa6.58□□□□□ -1.36
TPM4-212ENST00000590180 NDUFV3P56181 108 aaKnown RBP6.58□□□□□ -1.36
TPM4-212ENST00000590180 TRIAP1O43715 76 aa6.57□□□□□ -1.36
TPM4-212ENST00000590180 PCOTHQ58A44 107 aa6.57□□□□□ -1.36
TPM4-212ENST00000590180 K7ERJ3 54 aa6.56□□□□□ -1.36
TPM4-212ENST00000590180 FAT4Q6V0I7 4981 aa6.56□□□□□ -1.36
TPM4-212ENST00000590180 H3BMG7 143 aa6.55□□□□□ -1.36
TPM4-212ENST00000590180 COX6CP09669 75 aa6.55□□□□□ -1.36
TPM4-212ENST00000590180 LST1O00453 97 aa6.54□□□□□ -1.36
TPM4-212ENST00000590180 DNAL4O96015 105 aa6.54□□□□□ -1.36
TPM4-212ENST00000590180 LCE2AQ5TA79 106 aaPredicted RBP6.53□□□□□ -1.36
TPM4-212ENST00000590180 TEN1Q86WV5 123 aa6.52□□□□□ -1.37
TPM4-212ENST00000590180 SCGB1C2P0DMR2 95 aa6.51□□□□□ -1.37
TPM4-212ENST00000590180 ORMDL1Q9P0S3 153 aa6.51□□□□□ -1.37
TPM4-212ENST00000590180 Q6Q795 121 aa6.5□□□□□ -1.37
TPM4-212ENST00000590180 SS18L2Q9UHA2 77 aa6.5□□□□□ -1.37
TPM4-212ENST00000590180 A0A1B0GV72 72 aa6.49□□□□□ -1.37
TPM4-212ENST00000590180 H3BQ85 93 aa6.49□□□□□ -1.37
TPM4-212ENST00000590180 RPL37P61927 97 aaKnown RBP6.49□□□□□ -1.37
TPM4-212ENST00000590180 ANKRD29Q8N6D5 301 aa6.49□□□□□ -1.37
TPM4-212ENST00000590180 A0A087WSZ3 146 aa6.48□□□□□ -1.37
TPM4-212ENST00000590180 TMEM256-PLSCR3K7ERE1 68 aa6.48□□□□□ -1.37
TPM4-212ENST00000590180 OBSCN-AS1Q96MR7 158 aa6.47□□□□□ -1.37
TPM4-212ENST00000590180 A0A1W2PNM2 257 aa6.46□□□□□ -1.38
TPM4-212ENST00000590180 Q96NJ1 140 aa6.44□□□□□ -1.38
TPM4-212ENST00000590180 TRACP01848 142 aa6.43□□□□□ -1.38
TPM4-212ENST00000590180 UBE2V1Q13404 147 aa6.43□□□□□ -1.38
TPM4-212ENST00000590180 M0R143 59 aa6.42□□□□□ -1.38
TPM4-212ENST00000590180 ATP11AUNQ6ZP68 121 aa6.42□□□□□ -1.38
TPM4-212ENST00000590180 TRBV7-4A0A0J9YYF1 115 aa6.41□□□□□ -1.38
TPM4-212ENST00000590180 BAALC-AS2P0C853 105 aa6.41□□□□□ -1.38
TPM4-212ENST00000590180 CCKP06307 115 aa6.4□□□□□ -1.38
TPM4-212ENST00000590180 SMIM6P0DI80 62 aa6.39□□□□□ -1.39
TPM4-212ENST00000590180 RBM3P98179 157 aaKnown RBP6.39□□□□□ -1.39
TPM4-212ENST00000590180 LCE2CQ5TA81 110 aa6.39□□□□□ -1.39
TPM4-212ENST00000590180 Q75L30 129 aa6.39□□□□□ -1.39
TPM4-212ENST00000590180 SIGMAR1Q99720 223 aa6.39□□□□□ -1.39
TPM4-212ENST00000590180 VPS25Q9BRG1 176 aa6.39□□□□□ -1.39
TPM4-212ENST00000590180 IGKV4-1P06312 121 aa6.38□□□□□ -1.39
TPM4-212ENST00000590180 DSCR8Q96T75 97 aa6.38□□□□□ -1.39
TPM4-212ENST00000590180 NAA38Q9BRA0 125 aaKnown RBP6.38□□□□□ -1.39
TPM4-212ENST00000590180 DSCR10P59022 87 aa6.37□□□□□ -1.39
TPM4-212ENST00000590180 DEFB116Q30KQ4 102 aa6.37□□□□□ -1.39
TPM4-212ENST00000590180 KRTAP19-2Q3LHN2 52 aa6.36□□□□□ -1.39
TPM4-212ENST00000590180 LINC00313P59037 77 aa6.35□□□□□ -1.39
TPM4-212ENST00000590180 ATXN8Q156A1 80 aa6.35□□□□□ -1.39
TPM4-212ENST00000590180 COX6B2Q6YFQ2 88 aa6.35□□□□□ -1.39
TPM4-212ENST00000590180 KRTAP9-2Q9BYQ4 174 aa6.35□□□□□ -1.39
TPM4-212ENST00000590180 C9JAW5 83 aa6.34□□□□□ -1.39
TPM4-212ENST00000590180 TSTD3H0UI37 97 aa6.34□□□□□ -1.39
TPM4-212ENST00000590180 BATFQ16520 125 aa6.34□□□□□ -1.39
TPM4-212ENST00000590180 A8MUU9 505 aa6.33□□□□□ -1.4
TPM4-212ENST00000590180 C20orf166-AS1Q96NR2 134 aa6.33□□□□□ -1.4
TPM4-212ENST00000590180 LINC00472Q9H8W2 130 aa6.33□□□□□ -1.4
TPM4-212ENST00000590180 MT1HP80294 61 aa6.32□□□□□ -1.4
TPM4-212ENST00000590180 IGHV6-1A0A0B4J1U7 121 aa6.3□□□□□ -1.4
TPM4-212ENST00000590180 LOC105371267A0A1B0GV96 52 aa6.29□□□□□ -1.4
TPM4-212ENST00000590180 JMJD7-PLA2G4BH0Y9G9 81 aa6.29□□□□□ -1.4
TPM4-212ENST00000590180 M0R2T5 61 aa6.29□□□□□ -1.4
TPM4-212ENST00000590180 LYRM7Q5U5X0 104 aa6.29□□□□□ -1.4
TPM4-212ENST00000590180 NOTCH2NLQ7Z3S9 236 aa6.29□□□□□ -1.4
TPM4-212ENST00000590180 C21orf62-AS1Q17RA5 79 aa6.28□□□□□ -1.4
TPM4-212ENST00000590180 TRBV20-1A0A075B6N2 111 aa6.26□□□□□ -1.41
TPM4-212ENST00000590180 Q6ZQT0 140 aa6.26□□□□□ -1.41
TPM4-212ENST00000590180 KRTAP16-1A8MUX0 517 aa6.25□□□□□ -1.41
TPM4-212ENST00000590180 J3KT08 172 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms