RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 DNAL4O96015 105 aa5.32□□□□□ -1.56
CIRBP-218ENST00000588344 LINC01547P58512 204 aaPredicted RBP5.32□□□□□ -1.56
CIRBP-218ENST00000588344 LYRM7Q5U5X0 104 aa5.32□□□□□ -1.56
CIRBP-218ENST00000588344 Q8N377 158 aa5.32□□□□□ -1.56
CIRBP-218ENST00000588344 C3orf22Q8N5N4 141 aa5.32□□□□□ -1.56
CIRBP-218ENST00000588344 DMBT1Q9UGM3 2413 aaPredicted RBP5.31□□□□□ -1.56
CIRBP-218ENST00000588344 IGLV9-49A0A0B4J1Y8 123 aa5.31□□□□□ -1.56
CIRBP-218ENST00000588344 F8WEM9 126 aa5.31□□□□□ -1.56
CIRBP-218ENST00000588344 BATFQ16520 125 aa5.31□□□□□ -1.56
CIRBP-218ENST00000588344 LINC00304Q8N9R0 145 aa5.31□□□□□ -1.56
CIRBP-218ENST00000588344 Q8NBF4 154 aa5.31□□□□□ -1.56
CIRBP-218ENST00000588344 SNHG12Q9BXW3 62 aa5.31□□□□□ -1.56
CIRBP-218ENST00000588344 MOBPQ13875 183 aa5.3□□□□□ -1.56
CIRBP-218ENST00000588344 C9orf153Q5TBE3 101 aa5.3□□□□□ -1.56
CIRBP-218ENST00000588344 SMIM29Q86T20 159 aa5.3□□□□□ -1.56
CIRBP-218ENST00000588344 FAM218AQ96MZ4 157 aa5.3□□□□□ -1.56
CIRBP-218ENST00000588344 TMEM256-PLSCR3K7ERE1 68 aa5.29□□□□□ -1.56
CIRBP-218ENST00000588344 SPINK1P00995 79 aa5.29□□□□□ -1.56
CIRBP-218ENST00000588344 TRACP01848 142 aa5.29□□□□□ -1.56
CIRBP-218ENST00000588344 HERC1Q15751 4861 aa5.29□□□□□ -1.56
CIRBP-218ENST00000588344 TRBV20-1A0A075B6N2 111 aa5.28□□□□□ -1.56
CIRBP-218ENST00000588344 LST1O00453 97 aa5.28□□□□□ -1.56
CIRBP-218ENST00000588344 CLEC2BQ92478 149 aa5.28□□□□□ -1.56
CIRBP-218ENST00000588344 ORMDL1Q9P0S3 153 aa5.28□□□□□ -1.56
CIRBP-218ENST00000588344 C9orf118A6NHY6 69 aa5.27□□□□□ -1.57
CIRBP-218ENST00000588344 RPS29P62273 56 aaKnown RBP5.27□□□□□ -1.57
CIRBP-218ENST00000588344 ATXN8Q156A1 80 aa5.27□□□□□ -1.57
CIRBP-218ENST00000588344 COL5A1-AS1Q5SY13 56 aa5.27□□□□□ -1.57
CIRBP-218ENST00000588344 Q6JHZ5 121 aa5.27□□□□□ -1.57
CIRBP-218ENST00000588344 IGLV8-61A0A075B6I0 122 aa5.26□□□□□ -1.57
CIRBP-218ENST00000588344 CD164Q04900 197 aa5.26□□□□□ -1.57
CIRBP-218ENST00000588344 TAX1BP3O14907 124 aa5.25□□□□□ -1.57
CIRBP-218ENST00000588344 FABP2P12104 132 aa5.25□□□□□ -1.57
CIRBP-218ENST00000588344 NDUFV3P56181 108 aaKnown RBP5.25□□□□□ -1.57
CIRBP-218ENST00000588344 PCP4L1A6NKN8 68 aa5.24□□□□□ -1.57
CIRBP-218ENST00000588344 H3BUT2 72 aa5.24□□□□□ -1.57
CIRBP-218ENST00000588344 UBE2V1Q13404 147 aa5.24□□□□□ -1.57
CIRBP-218ENST00000588344 A0A1W2PPM0 123 aa5.23□□□□□ -1.57
CIRBP-218ENST00000588344 LIMD2Q9BT23 127 aa5.23□□□□□ -1.57
CIRBP-218ENST00000588344 H3BMG7 143 aa5.22□□□□□ -1.57
CIRBP-218ENST00000588344 TCL1BO95988 128 aa5.22□□□□□ -1.57
CIRBP-218ENST00000588344 BAALC-AS2P0C853 105 aa5.22□□□□□ -1.57
CIRBP-218ENST00000588344 NAA38Q9BRA0 125 aaKnown RBP5.22□□□□□ -1.57
CIRBP-218ENST00000588344 SMCPP49901 116 aaPredicted RBP5.21□□□□□ -1.58
CIRBP-218ENST00000588344 Q5XG85 94 aa5.2□□□□□ -1.58
CIRBP-218ENST00000588344 ANKRD29Q8N6D5 301 aa5.2□□□□□ -1.58
CIRBP-218ENST00000588344 IGFL1Q6UW32 110 aa5.19□□□□□ -1.58
CIRBP-218ENST00000588344 FP248Q71RG6 208 aaPredicted RBP5.19□□□□□ -1.58
CIRBP-218ENST00000588344 JMJD7-PLA2G4BH0Y9G9 81 aa5.18□□□□□ -1.58
CIRBP-218ENST00000588344 RBM3P98179 157 aaKnown RBP5.18□□□□□ -1.58
CIRBP-218ENST00000588344 PRR4Q16378 134 aa5.18□□□□□ -1.58
CIRBP-218ENST00000588344 Q6Q795 121 aa5.18□□□□□ -1.58
CIRBP-218ENST00000588344 HRCT1Q6UXD1 115 aa5.18□□□□□ -1.58
CIRBP-218ENST00000588344 TEN1Q86WV5 123 aa5.18□□□□□ -1.58
CIRBP-218ENST00000588344 C9JAW5 83 aa5.17□□□□□ -1.58
CIRBP-218ENST00000588344 LORP23490 312 aaPredicted RBP5.17□□□□□ -1.58
CIRBP-218ENST00000588344 C21orf62-AS1Q17RA5 79 aa5.17□□□□□ -1.58
CIRBP-218ENST00000588344 DSCR8Q96T75 97 aa5.17□□□□□ -1.58
CIRBP-218ENST00000588344 SPCS1Q9Y6A9 102 aa5.17□□□□□ -1.58
CIRBP-218ENST00000588344 HMCN2Q8NDA2 5059 aa5.17□□□□□ -1.58
CIRBP-218ENST00000588344 TRBV7-7A0A0K0K1E9 115 aa5.16□□□□□ -1.58
CIRBP-218ENST00000588344 H3BT86 120 aa5.16□□□□□ -1.58
CIRBP-218ENST00000588344 PDE6GP18545 87 aa5.16□□□□□ -1.58
CIRBP-218ENST00000588344 TRBV7-4A0A0J9YYF1 115 aa5.15□□□□□ -1.59
CIRBP-218ENST00000588344 ASB16-AS1Q495Z4 193 aa5.15□□□□□ -1.59
CIRBP-218ENST00000588344 SS18L2Q9UHA2 77 aa5.15□□□□□ -1.59
CIRBP-218ENST00000588344 IGLV7-46A0A075B6I9 117 aa5.14□□□□□ -1.59
CIRBP-218ENST00000588344 A0A0G2JQZ4 141 aa5.14□□□□□ -1.59
CIRBP-218ENST00000588344 GTF2H5Q6ZYL4 71 aa5.14□□□□□ -1.59
CIRBP-218ENST00000588344 A0A1B0GW54 56 aa5.13□□□□□ -1.59
CIRBP-218ENST00000588344 RETNLBQ9BQ08 111 aa5.13□□□□□ -1.59
CIRBP-218ENST00000588344 K7EP34 96 aa5.12□□□□□ -1.59
CIRBP-218ENST00000588344 CCKP06307 115 aa5.12□□□□□ -1.59
CIRBP-218ENST00000588344 LOC110117498A0A087WWA1 95 aa5.11□□□□□ -1.59
CIRBP-218ENST00000588344 A0A1W2PNM2 257 aa5.11□□□□□ -1.59
CIRBP-218ENST00000588344 TPRXLQ17RH7 258 aa5.11□□□□□ -1.59
CIRBP-218ENST00000588344 OBSCN-AS1Q96MR7 158 aa5.11□□□□□ -1.59
CIRBP-218ENST00000588344 C1orf195Q5TG92 126 aa5.1□□□□□ -1.59
CIRBP-218ENST00000588344 A0A087WSZ3 146 aa5.09□□□□□ -1.59
CIRBP-218ENST00000588344 LOC100996750A0A140TA64 210 aa5.09□□□□□ -1.59
CIRBP-218ENST00000588344 A0A1B0GV72 72 aa5.09□□□□□ -1.59
CIRBP-218ENST00000588344 F8W1H4 67 aa5.09□□□□□ -1.59
CIRBP-218ENST00000588344 KRTAP4-6Q9BYQ5 205 aa5.09□□□□□ -1.59
CIRBP-218ENST00000588344 Q6ZQT0 140 aa5.08□□□□□ -1.6
CIRBP-218ENST00000588344 VPS25Q9BRG1 176 aa5.07□□□□□ -1.6
CIRBP-218ENST00000588344 CDIP1Q9H305 208 aa5.07□□□□□ -1.6
CIRBP-218ENST00000588344 MTURNQ8N3F0 131 aa5.06□□□□□ -1.6
CIRBP-218ENST00000588344 KRTAP13-3Q3SY46 172 aa5.05□□□□□ -1.6
CIRBP-218ENST00000588344 C14orf132Q9NPU4 83 aa5.05□□□□□ -1.6
CIRBP-218ENST00000588344 PRO0461Q9UI25 63 aa5.05□□□□□ -1.6
CIRBP-218ENST00000588344 LRP2P98164 4655 aa5.03□□□□□ -1.6
CIRBP-218ENST00000588344 J3KT08 172 aa5.03□□□□□ -1.6
CIRBP-218ENST00000588344 NREPQ16612 68 aa5.01□□□□□ -1.61
CIRBP-218ENST00000588344 LINC00472Q9H8W2 130 aa5.01□□□□□ -1.61
CIRBP-218ENST00000588344 LPAP08519 4548 aa5□□□□□ -1.61
CIRBP-218ENST00000588344 IGKV4-1P06312 121 aa5□□□□□ -1.61
CIRBP-218ENST00000588344 Q96NJ1 140 aa5□□□□□ -1.61
CIRBP-218ENST00000588344 UBR4Q5T4S7 5183 aa4.98□□□□□ -1.61
CIRBP-218ENST00000588344 NDUFB1O75438 58 aa4.98□□□□□ -1.61
CIRBP-218ENST00000588344 XP32Q5T750 250 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms