RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-208ENST00000588009 ATP5EP56381 51 aaPredicted RBP1.5□□□□□ -2.17
TUBD1-208ENST00000588009 C10orf99Q6UWK7 81 aa1.5□□□□□ -2.17
TUBD1-208ENST00000588009 CYP4F30PQ9H0H9 118 aa1.5□□□□□ -2.17
TUBD1-208ENST00000588009 BET1LQ9NYM9 111 aa1.5□□□□□ -2.17
TUBD1-208ENST00000588009 AHNAKQ09666 5890 aaKnown RBP1.5□□□□□ -2.17
TUBD1-208ENST00000588009 SNCAP37840 140 aa1.48□□□□□ -2.17
TUBD1-208ENST00000588009 EDDM3BP56851 147 aa1.48□□□□□ -2.17
TUBD1-208ENST00000588009 GNGT1P63211 74 aa1.48□□□□□ -2.17
TUBD1-208ENST00000588009 C10orf128Q5T292 105 aa1.48□□□□□ -2.17
TUBD1-208ENST00000588009 PROK2Q9HC23 129 aa1.48□□□□□ -2.17
TUBD1-208ENST00000588009 LINC00846Q9NV44 126 aa1.48□□□□□ -2.17
TUBD1-208ENST00000588009 MDN1Q9NU22 5596 aa1.48□□□□□ -2.17
TUBD1-208ENST00000588009 H3BQ15 152 aa1.47□□□□□ -2.17
TUBD1-208ENST00000588009 MT-ATP8P03928 68 aa1.47□□□□□ -2.17
TUBD1-208ENST00000588009 Q96NJ1 140 aa1.47□□□□□ -2.17
TUBD1-208ENST00000588009 TMEM14BQ9NUH8 114 aa1.47□□□□□ -2.17
TUBD1-208ENST00000588009 UBE2DNLQ8IWF7 75 aa1.46□□□□□ -2.18
TUBD1-208ENST00000588009 FAM213BQ8TBF2 198 aa1.46□□□□□ -2.18
TUBD1-208ENST00000588009 PLAC4Q8WY50 150 aa1.46□□□□□ -2.18
TUBD1-208ENST00000588009 KRTAP4-1Q9BYQ7 146 aa1.46□□□□□ -2.18
TUBD1-208ENST00000588009 TRBV7-3A0A075B6L6 115 aa1.45□□□□□ -2.18
TUBD1-208ENST00000588009 H3BUX3 64 aa1.45□□□□□ -2.18
TUBD1-208ENST00000588009 COL5A1-AS1Q5SY13 56 aa1.45□□□□□ -2.18
TUBD1-208ENST00000588009 FAM74A4Q5TZK3 123 aa1.45□□□□□ -2.18
TUBD1-208ENST00000588009 PPP1R1CQ8WVI7 109 aa1.45□□□□□ -2.18
TUBD1-208ENST00000588009 V9GYV3 84 aa1.45□□□□□ -2.18
TUBD1-208ENST00000588009 hADV29S1A0JD25 119 aa1.44□□□□□ -2.18
TUBD1-208ENST00000588009 H0YGG7 62 aa1.44□□□□□ -2.18
TUBD1-208ENST00000588009 MYOZ3Q8TDC0 251 aa1.44□□□□□ -2.18
TUBD1-208ENST00000588009 DNAH8Q96JB1 4490 aa1.43□□□□□ -2.18
TUBD1-208ENST00000588009 DEFB136Q30KP8 78 aa1.43□□□□□ -2.18
TUBD1-208ENST00000588009 Q5VV11 94 aa1.43□□□□□ -2.18
TUBD1-208ENST00000588009 WFDC6Q9BQY6 131 aa1.43□□□□□ -2.18
TUBD1-208ENST00000588009 PVALEFA0A1B0GWK0 134 aa1.42□□□□□ -2.18
TUBD1-208ENST00000588009 MT1HP80294 61 aa1.42□□□□□ -2.18
TUBD1-208ENST00000588009 NDUFA4L2Q9NRX3 87 aa1.42□□□□□ -2.18
TUBD1-208ENST00000588009 MUC5BQ9HC84 5762 aaPredicted RBP1.41□□□□□ -2.18
TUBD1-208ENST00000588009 PPP1R17O96001 155 aa1.41□□□□□ -2.18
TUBD1-208ENST00000588009 SPINT3P49223 89 aa1.41□□□□□ -2.18
TUBD1-208ENST00000588009 CCL18P55774 89 aa1.41□□□□□ -2.18
TUBD1-208ENST00000588009 KRTAP19-6Q3LI70 58 aa1.41□□□□□ -2.18
TUBD1-208ENST00000588009 MGST2Q99735 147 aa1.41□□□□□ -2.18
TUBD1-208ENST00000588009 DPY30Q9C005 99 aa1.41□□□□□ -2.18
TUBD1-208ENST00000588009 LENEPQ9Y5L5 61 aa1.41□□□□□ -2.18
TUBD1-208ENST00000588009 MUC17Q685J3 4493 aa1.4□□□□□ -2.19
TUBD1-208ENST00000588009 TRGV1A0A0A0MS02 117 aa1.4□□□□□ -2.19
TUBD1-208ENST00000588009 SMIM31A0A1B0GVY4 71 aa1.4□□□□□ -2.19
TUBD1-208ENST00000588009 M0R2T5 61 aa1.4□□□□□ -2.19
TUBD1-208ENST00000588009 GNGT2O14610 69 aa1.4□□□□□ -2.19
TUBD1-208ENST00000588009 SPRR2EP22531 72 aa1.4□□□□□ -2.19
TUBD1-208ENST00000588009 SPRR2BP35325 72 aa1.4□□□□□ -2.19
TUBD1-208ENST00000588009 SPRR2AP35326 72 aa1.4□□□□□ -2.19
TUBD1-208ENST00000588009 RPL37P61927 97 aaKnown RBP1.4□□□□□ -2.19
TUBD1-208ENST00000588009 PRB3Q04118 309 aaPredicted RBP1.4□□□□□ -2.19
TUBD1-208ENST00000588009 DEFB106AQ8N104 65 aa1.4□□□□□ -2.19
TUBD1-208ENST00000588009 NAP1L6A6NFF2 107 aa1.39□□□□□ -2.19
TUBD1-208ENST00000588009 GNG2P59768 71 aa1.39□□□□□ -2.19
TUBD1-208ENST00000588009 Q0VG73 95 aa1.39□□□□□ -2.19
TUBD1-208ENST00000588009 FAM167A-AS1Q96KT0 104 aa1.39□□□□□ -2.19
TUBD1-208ENST00000588009 TRAV22A0A0B4J277 110 aa1.38□□□□□ -2.19
TUBD1-208ENST00000588009 A0A0G2JND7 137 aa1.38□□□□□ -2.19
TUBD1-208ENST00000588009 UBE2D3P61077 147 aa1.38□□□□□ -2.19
TUBD1-208ENST00000588009 UBE2D2P62837 147 aa1.38□□□□□ -2.19
TUBD1-208ENST00000588009 SPAG11BQ08648 103 aa1.38□□□□□ -2.19
TUBD1-208ENST00000588009 SPAG11AQ6PDA7 123 aa1.38□□□□□ -2.19
TUBD1-208ENST00000588009 CDC42SE2Q9NRR3 84 aa1.38□□□□□ -2.19
TUBD1-208ENST00000588009 CHKB-CPT1BH3BT56 60 aa1.37□□□□□ -2.19
TUBD1-208ENST00000588009 HMGN4O00479 90 aa1.37□□□□□ -2.19
TUBD1-208ENST00000588009 LINC00032P0C843 101 aa1.37□□□□□ -2.19
TUBD1-208ENST00000588009 SPINK13Q1W4C9 94 aa1.37□□□□□ -2.19
TUBD1-208ENST00000588009 ZNF720Q7Z2F6 126 aa1.37□□□□□ -2.19
TUBD1-208ENST00000588009 Q9H521 79 aa1.37□□□□□ -2.19
TUBD1-208ENST00000588009 SPRR2DP22532 72 aa1.36□□□□□ -2.19
TUBD1-208ENST00000588009 SNRPFP62306 86 aaKnown RBP1.36□□□□□ -2.19
TUBD1-208ENST00000588009 DEFB135Q30KP9 77 aa1.36□□□□□ -2.19
TUBD1-208ENST00000588009 PMCHL2Q9BQD1 86 aa1.36□□□□□ -2.19
TUBD1-208ENST00000588009 MANBALQ9NQG1 85 aa1.36□□□□□ -2.19
TUBD1-208ENST00000588009 SCP2D1Q9UJQ7 156 aa1.36□□□□□ -2.19
TUBD1-208ENST00000588009 AP4S1Q9Y587 144 aa1.36□□□□□ -2.19
TUBD1-208ENST00000588009 MUC5ACP98088 5654 aa1.36□□□□□ -2.19
TUBD1-208ENST00000588009 A0A087WXM4 84 aa1.35□□□□□ -2.19
TUBD1-208ENST00000588009 GVQW2A0A096LPI5 108 aaPredicted RBP1.35□□□□□ -2.19
TUBD1-208ENST00000588009 TRAV1-2A0A0B4J238 106 aa1.35□□□□□ -2.19
TUBD1-208ENST00000588009 CRYM-AS1A6NIL9 109 aa1.35□□□□□ -2.19
TUBD1-208ENST00000588009 DEFB4AO15263 64 aa1.35□□□□□ -2.19
TUBD1-208ENST00000588009 ACYP2P14621 99 aa1.35□□□□□ -2.19
TUBD1-208ENST00000588009 KRTDAPP60985 99 aa1.35□□□□□ -2.19
TUBD1-208ENST00000588009 SEC11AP67812 179 aa1.35□□□□□ -2.19
TUBD1-208ENST00000588009 VMO1Q7Z5L0 202 aa1.35□□□□□ -2.19
TUBD1-208ENST00000588009 DEFB107AQ8IZN7 70 aa1.35□□□□□ -2.19
TUBD1-208ENST00000588009 LINC01600Q96MT4 127 aa1.35□□□□□ -2.19
TUBD1-208ENST00000588009 AMELXQ99217 191 aa1.35□□□□□ -2.19
TUBD1-208ENST00000588009 VAMP8Q9BV40 100 aa1.35□□□□□ -2.19
TUBD1-208ENST00000588009 R4GMQ9 66 aa1.35□□□□□ -2.19
TUBD1-208ENST00000588009 V9GYH0 126 aa1.35□□□□□ -2.19
TUBD1-208ENST00000588009 M0R135 149 aa1.34□□□□□ -2.19
TUBD1-208ENST00000588009 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.34□□□□□ -2.19
TUBD1-208ENST00000588009 IGLC1P0CG04 106 aa1.33□□□□□ -2.2
TUBD1-208ENST00000588009 ZNF137PP52743 207 aa1.33□□□□□ -2.2
TUBD1-208ENST00000588009 SPINK9Q5DT21 86 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms