RNA–Protein interactions for RNA: ENST00000586084.1

PLEKHM1-214, Transcript of pleckstrin homology and RUN domain containing M1, human

TSL 4

Gene PLEKHM1, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLEKHM1-214	ENST00000586084	LOC105371267	A0A1B0GV96	52 aa		11.75	□□□□□ -0.53
PLEKHM1-214	ENST00000586084	COX7B	P24311	80 aa		11.75	□□□□□ -0.53
PLEKHM1-214	ENST00000586084	ELOF1	P60002	83 aa	Known RBP	11.75	□□□□□ -0.53
PLEKHM1-214	ENST00000586084		Q5XG85	94 aa		11.74	□□□□□ -0.53
PLEKHM1-214	ENST00000586084	C2orf91	Q6ZV80	131 aa		11.74	□□□□□ -0.53
PLEKHM1-214	ENST00000586084	DEFB105A	Q8NG35	78 aa		11.74	□□□□□ -0.53
PLEKHM1-214	ENST00000586084	TEX49	A0A1B0GTD5	131 aa		11.73	□□□□□ -0.53
PLEKHM1-214	ENST00000586084		A4D1N5	150 aa		11.73	□□□□□ -0.53
PLEKHM1-214	ENST00000586084		A6NDN8	102 aa		11.73	□□□□□ -0.53
PLEKHM1-214	ENST00000586084	COX6B2	Q6YFQ2	88 aa		11.73	□□□□□ -0.53
PLEKHM1-214	ENST00000586084	RPL37	P61927	97 aa	Known RBP	11.71	□□□□□ -0.53
PLEKHM1-214	ENST00000586084	C6orf99	Q4VX62	202 aa		11.71	□□□□□ -0.53
PLEKHM1-214	ENST00000586084	C1orf195	Q5TG92	126 aa		11.7	□□□□□ -0.54
PLEKHM1-214	ENST00000586084	TMEM238L	A0A1B0GVL6	79 aa		11.68	□□□□□ -0.54
PLEKHM1-214	ENST00000586084		A6NJY4	79 aa		11.68	□□□□□ -0.54
PLEKHM1-214	ENST00000586084	CEND1	Q8N111	149 aa		11.68	□□□□□ -0.54
PLEKHM1-214	ENST00000586084	HSD52	Q0P140	79 aa		11.66	□□□□□ -0.54
PLEKHM1-214	ENST00000586084	TRBV7-6	A0A0J9YX20	115 aa		11.65	□□□□□ -0.54
PLEKHM1-214	ENST00000586084	SMIM29	Q86T20	159 aa		11.63	□□□□□ -0.55
PLEKHM1-214	ENST00000586084	RAB37	Q96AX2	223 aa		11.63	□□□□□ -0.55
PLEKHM1-214	ENST00000586084	C12orf57	Q99622	126 aa		11.63	□□□□□ -0.55
PLEKHM1-214	ENST00000586084		A0A0B4J2C4	111 aa		11.61	□□□□□ -0.55
PLEKHM1-214	ENST00000586084		A0A1B0GWB2	263 aa		11.61	□□□□□ -0.55
PLEKHM1-214	ENST00000586084	CFC1	P0CG37	223 aa		11.61	□□□□□ -0.55
PLEKHM1-214	ENST00000586084	IGLV5-48	A0A075B6I7	105 aa		11.6	□□□□□ -0.55
PLEKHM1-214	ENST00000586084	TSTD3	H0UI37	97 aa		11.6	□□□□□ -0.55
PLEKHM1-214	ENST00000586084	VAMP3	Q15836	100 aa		11.6	□□□□□ -0.55
PLEKHM1-214	ENST00000586084	SMIM11B	Q8TCY0	68 aa		11.6	□□□□□ -0.55
PLEKHM1-214	ENST00000586084	TCL1B	O95988	128 aa		11.59	□□□□□ -0.55
PLEKHM1-214	ENST00000586084		A0A0G2JQZ4	141 aa		11.58	□□□□□ -0.56
PLEKHM1-214	ENST00000586084	FXYD2	P54710	66 aa		11.57	□□□□□ -0.56
PLEKHM1-214	ENST00000586084	PRO1854	Q9UHT4	67 aa		11.55	□□□□□ -0.56
PLEKHM1-214	ENST00000586084	BVES-AS1	Q5T3Y7	98 aa		11.53	□□□□□ -0.56
PLEKHM1-214	ENST00000586084	NHP2	Q9NX24	153 aa	Known RBP	11.53	□□□□□ -0.56
PLEKHM1-214	ENST00000586084		M0R143	59 aa		11.5	□□□□□ -0.57
PLEKHM1-214	ENST00000586084		F8WEM9	126 aa		11.48	□□□□□ -0.57
PLEKHM1-214	ENST00000586084	FLG	P20930	4061 aa	Predicted RBP	11.46	□□□□□ -0.57
PLEKHM1-214	ENST00000586084		H0YGX0	51 aa		11.46	□□□□□ -0.57
PLEKHM1-214	ENST00000586084	SNCG	O76070	127 aa		11.46	□□□□□ -0.57
PLEKHM1-214	ENST00000586084		Q6Q795	121 aa		11.46	□□□□□ -0.57
PLEKHM1-214	ENST00000586084	ATP11AUN	Q6ZP68	121 aa		11.45	□□□□□ -0.58
PLEKHM1-214	ENST00000586084	LINC00575	Q6W349	94 aa		11.44	□□□□□ -0.58
PLEKHM1-214	ENST00000586084	hADV29S1	A0JD25	119 aa		11.42	□□□□□ -0.58
PLEKHM1-214	ENST00000586084		K7ERJ3	54 aa		11.4	□□□□□ -0.58
PLEKHM1-214	ENST00000586084	COX6C	P09669	75 aa		11.4	□□□□□ -0.58
PLEKHM1-214	ENST00000586084		Q6JHZ5	121 aa		11.4	□□□□□ -0.58
PLEKHM1-214	ENST00000586084		Q75L30	129 aa		11.4	□□□□□ -0.58
PLEKHM1-214	ENST00000586084	PSMB2	P49721	201 aa		11.39	□□□□□ -0.59
PLEKHM1-214	ENST00000586084	OBSCN-AS1	Q96MR7	158 aa		11.38	□□□□□ -0.59
PLEKHM1-214	ENST00000586084	TRBV7-7	A0A0K0K1E9	115 aa		11.37	□□□□□ -0.59
PLEKHM1-214	ENST00000586084	CLEC2B	Q92478	149 aa		11.37	□□□□□ -0.59
PLEKHM1-214	ENST00000586084		A0A1B0GX51	115 aa		11.36	□□□□□ -0.59
PLEKHM1-214	ENST00000586084	TRIAP1	O43715	76 aa		11.36	□□□□□ -0.59
PLEKHM1-214	ENST00000586084	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	11.35	□□□□□ -0.59
PLEKHM1-214	ENST00000586084	GHRH	P01286	108 aa		11.33	□□□□□ -0.6
PLEKHM1-214	ENST00000586084	OCIAD2	Q56VL3	154 aa		11.33	□□□□□ -0.6
PLEKHM1-214	ENST00000586084	IGFL1	Q6UW32	110 aa		11.33	□□□□□ -0.6
PLEKHM1-214	ENST00000586084		Q6ZQY7	126 aa		11.33	□□□□□ -0.6
PLEKHM1-214	ENST00000586084	KRTAP9-7	A8MTY7	169 aa		11.32	□□□□□ -0.6
PLEKHM1-214	ENST00000586084	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	11.32	□□□□□ -0.6
PLEKHM1-214	ENST00000586084	PPDPFL	Q8WWR9	84 aa		11.31	□□□□□ -0.6
PLEKHM1-214	ENST00000586084	SCGB1C2	P0DMR2	95 aa		11.3	□□□□□ -0.6
PLEKHM1-214	ENST00000586084	BATF	Q16520	125 aa		11.3	□□□□□ -0.6
PLEKHM1-214	ENST00000586084	FAM218A	Q96MZ4	157 aa		11.28	□□□□□ -0.6
PLEKHM1-214	ENST00000586084		Q96NJ1	140 aa		11.27	□□□□□ -0.61
PLEKHM1-214	ENST00000586084	LST1	O00453	97 aa		11.26	□□□□□ -0.61
PLEKHM1-214	ENST00000586084	DNAL4	O96015	105 aa		11.26	□□□□□ -0.61
PLEKHM1-214	ENST00000586084		H3BQ85	93 aa		11.24	□□□□□ -0.61
PLEKHM1-214	ENST00000586084	KRTAP9-8	Q9BYQ0	159 aa		11.24	□□□□□ -0.61
PLEKHM1-214	ENST00000586084	TRBV20-1	A0A075B6N2	111 aa		11.23	□□□□□ -0.61
PLEKHM1-214	ENST00000586084	SNHG12	Q9BXW3	62 aa		11.23	□□□□□ -0.61
PLEKHM1-214	ENST00000586084	LYRM7	Q5U5X0	104 aa		11.22	□□□□□ -0.61
PLEKHM1-214	ENST00000586084	TRAC	P01848	142 aa		11.2	□□□□□ -0.62
PLEKHM1-214	ENST00000586084	C20orf166-AS1	Q96NR2	134 aa		11.19	□□□□□ -0.62
PLEKHM1-214	ENST00000586084	ORMDL1	Q9P0S3	153 aa		11.19	□□□□□ -0.62
PLEKHM1-214	ENST00000586084	SS18L2	Q9UHA2	77 aa		11.19	□□□□□ -0.62
PLEKHM1-214	ENST00000586084	C9orf118	A6NHY6	69 aa		11.15	□□□□□ -0.62
PLEKHM1-214	ENST00000586084		A8MUU9	505 aa		11.15	□□□□□ -0.62
PLEKHM1-214	ENST00000586084		H3BUT2	72 aa		11.15	□□□□□ -0.62
PLEKHM1-214	ENST00000586084	TMEM256-PLSCR3	K7ERE1	68 aa		11.15	□□□□□ -0.62
PLEKHM1-214	ENST00000586084	FABP2	P12104	132 aa		11.15	□□□□□ -0.62
PLEKHM1-214	ENST00000586084	ATXN8	Q156A1	80 aa		11.15	□□□□□ -0.62
PLEKHM1-214	ENST00000586084	NAA38	Q9BRA0	125 aa	Known RBP	11.15	□□□□□ -0.62
PLEKHM1-214	ENST00000586084	PCP4L1	A6NKN8	68 aa		11.14	□□□□□ -0.63
PLEKHM1-214	ENST00000586084	COL5A1-AS1	Q5SY13	56 aa		11.13	□□□□□ -0.63
PLEKHM1-214	ENST00000586084	TAX1BP3	O14907	124 aa		11.12	□□□□□ -0.63
PLEKHM1-214	ENST00000586084	NDUFV3	P56181	108 aa	Known RBP	11.12	□□□□□ -0.63
PLEKHM1-214	ENST00000586084	TEN1	Q86WV5	123 aa		11.08	□□□□□ -0.64
PLEKHM1-214	ENST00000586084		A0A1W2PPM0	123 aa		11.07	□□□□□ -0.64
PLEKHM1-214	ENST00000586084		H3BMG7	143 aa		11.07	□□□□□ -0.64
PLEKHM1-214	ENST00000586084	UBE2V1	Q13404	147 aa		11.07	□□□□□ -0.64
PLEKHM1-214	ENST00000586084	BAALC-AS2	P0C853	105 aa		11.05	□□□□□ -0.64
PLEKHM1-214	ENST00000586084	FAM236D	A0A1B0GTK5	79 aa		11.04	□□□□□ -0.64
PLEKHM1-214	ENST00000586084	MT2A	P02795	61 aa		11.04	□□□□□ -0.64
PLEKHM1-214	ENST00000586084	FAM236C	P0DP71	79 aa		11.04	□□□□□ -0.64
PLEKHM1-214	ENST00000586084	SSPO	A2VEC9	5147 aa		11.03	□□□□□ -0.64
PLEKHM1-214	ENST00000586084	USH2A	O75445	5202 aa		11.02	□□□□□ -0.64
PLEKHM1-214	ENST00000586084		A0A087WSZ3	146 aa		11.01	□□□□□ -0.65
PLEKHM1-214	ENST00000586084	DSCR10	P59022	87 aa		11	□□□□□ -0.65
PLEKHM1-214	ENST00000586084	ANKRD29	Q8N6D5	301 aa		11	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms