RNA–Protein interactions for RNA: ENST00000585600.5

LAMA3-204, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best)

Gene LAMA3, Length 1,815 nt, Biotype non stop decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-204ENST00000585600 ETDCA0A1B0GVM5 59 aa14.05□□□□□ -0.16
LAMA3-204ENST00000585600 UQCRQO14949 82 aa14.04□□□□□ -0.16
LAMA3-204ENST00000585600 Q6ZVQ6 151 aa14.04□□□□□ -0.16
LAMA3-204ENST00000585600 C3orf22Q8N5N4 141 aa14.04□□□□□ -0.16
LAMA3-204ENST00000585600 EPPK1P58107 5090 aaKnown RBP14.04□□□□□ -0.16
LAMA3-204ENST00000585600 A0A087WVE0 104 aa14.04□□□□□ -0.16
LAMA3-204ENST00000585600 Q8N377 158 aa14.04□□□□□ -0.16
LAMA3-204ENST00000585600 Q9BRP9 147 aa14.02□□□□□ -0.16
LAMA3-204ENST00000585600 APOBP04114 4563 aaKnown RBP14.02□□□□□ -0.17
LAMA3-204ENST00000585600 LINC01547P58512 204 aaPredicted RBP14.01□□□□□ -0.17
LAMA3-204ENST00000585600 COX7CP15954 63 aa14.01□□□□□ -0.17
LAMA3-204ENST00000585600 KRTAP11-1Q8IUC1 163 aa14.01□□□□□ -0.17
LAMA3-204ENST00000585600 IGLV5-48A0A075B6I7 105 aa13.99□□□□□ -0.17
LAMA3-204ENST00000585600 CXCL6P80162 114 aa13.99□□□□□ -0.17
LAMA3-204ENST00000585600 FAM19A1Q7Z5A9 133 aa13.98□□□□□ -0.17
LAMA3-204ENST00000585600 DEFB105AQ8NG35 78 aa13.98□□□□□ -0.17
LAMA3-204ENST00000585600 REG3GQ6UW15 175 aa13.97□□□□□ -0.17
LAMA3-204ENST00000585600 SERP2Q8N6R1 65 aa13.94□□□□□ -0.18
LAMA3-204ENST00000585600 UBE2BP63146 152 aa13.94□□□□□ -0.18
LAMA3-204ENST00000585600 A0A1B0GW54 56 aa13.92□□□□□ -0.18
LAMA3-204ENST00000585600 C9orf153Q5TBE3 101 aa13.92□□□□□ -0.18
LAMA3-204ENST00000585600 BCE1O60756 84 aa13.91□□□□□ -0.18
LAMA3-204ENST00000585600 SS18L2Q9UHA2 77 aa13.9□□□□□ -0.18
LAMA3-204ENST00000585600 CRYGAP11844 174 aa13.9□□□□□ -0.18
LAMA3-204ENST00000585600 ST20-AS1Q8NBB2 130 aa13.89□□□□□ -0.19
LAMA3-204ENST00000585600 ERC2-IT1O76042 136 aa13.88□□□□□ -0.19
LAMA3-204ENST00000585600 PSORS1C2Q9UIG4 136 aa13.85□□□□□ -0.19
LAMA3-204ENST00000585600 CDK2AP2O75956 126 aa13.84□□□□□ -0.19
LAMA3-204ENST00000585600 NREPQ16612 68 aa13.84□□□□□ -0.19
LAMA3-204ENST00000585600 SMR3BP02814 79 aaPredicted RBP13.83□□□□□ -0.2
LAMA3-204ENST00000585600 C1orf137Q5JT78 98 aa13.82□□□□□ -0.2
LAMA3-204ENST00000585600 HSPG2P98160 4391 aa13.81□□□□□ -0.2
LAMA3-204ENST00000585600 FAT1Q14517 4588 aa13.8□□□□□ -0.2
LAMA3-204ENST00000585600 A0A1W2PNM2 257 aa13.8□□□□□ -0.2
LAMA3-204ENST00000585600 SMIM29Q86T20 159 aa13.79□□□□□ -0.2
LAMA3-204ENST00000585600 SMIM20Q8N5G0 67 aa13.78□□□□□ -0.2
LAMA3-204ENST00000585600 H0Y9J4 135 aa13.77□□□□□ -0.21
LAMA3-204ENST00000585600 Q8NBF4 154 aa13.77□□□□□ -0.21
LAMA3-204ENST00000585600 SPRR4Q96PI1 79 aa13.77□□□□□ -0.21
LAMA3-204ENST00000585600 RYR1P21817 5038 aa13.77□□□□□ -0.21
LAMA3-204ENST00000585600 KIAA1109Q2LD37 5005 aa13.76□□□□□ -0.21
LAMA3-204ENST00000585600 VPS13BQ7Z7G8 4022 aa13.75□□□□□ -0.21
LAMA3-204ENST00000585600 PRLHP81277 87 aa13.74□□□□□ -0.21
LAMA3-204ENST00000585600 TRAV7A0A075B6U4 112 aa13.74□□□□□ -0.21
LAMA3-204ENST00000585600 BPY2O14599 106 aa13.73□□□□□ -0.21
LAMA3-204ENST00000585600 KRTAP13-1Q8IUC0 172 aa13.73□□□□□ -0.21
LAMA3-204ENST00000585600 F8WEM9 126 aa13.71□□□□□ -0.21
LAMA3-204ENST00000585600 IGLV8-61A0A075B6I0 122 aa13.71□□□□□ -0.22
LAMA3-204ENST00000585600 KRTAP17-1Q9BYP8 105 aa13.7□□□□□ -0.22
LAMA3-204ENST00000585600 IGLV7-43P04211 117 aa13.69□□□□□ -0.22
LAMA3-204ENST00000585600 UBE2AP49459 152 aa13.69□□□□□ -0.22
LAMA3-204ENST00000585600 RPL37AP61513 92 aaKnown RBP13.69□□□□□ -0.22
LAMA3-204ENST00000585600 HIGD2AQ9BW72 106 aa13.69□□□□□ -0.22
LAMA3-204ENST00000585600 IGKV4-1P06312 121 aa13.68□□□□□ -0.22
LAMA3-204ENST00000585600 KRTAP10-4P60372 401 aaPredicted RBP13.67□□□□□ -0.22
LAMA3-204ENST00000585600 ZNF861PO60384 105 aa13.66□□□□□ -0.22
LAMA3-204ENST00000585600 SPRR1BP22528 89 aa13.66□□□□□ -0.22
LAMA3-204ENST00000585600 BIRC6Q9NR09 4857 aa13.65□□□□□ -0.22
LAMA3-204ENST00000585600 CYSTM1Q9H1C7 97 aa13.65□□□□□ -0.22
LAMA3-204ENST00000585600 IGFL1Q6UW32 110 aa13.62□□□□□ -0.23
LAMA3-204ENST00000585600 TMEM258P61165 79 aa13.61□□□□□ -0.23
LAMA3-204ENST00000585600 Q8N9L7 120 aa13.61□□□□□ -0.23
LAMA3-204ENST00000585600 FAM229AH3BQW9 127 aa13.6□□□□□ -0.23
LAMA3-204ENST00000585600 Q5VSD8 79 aa13.59□□□□□ -0.23
LAMA3-204ENST00000585600 C20orf197Q8N268 126 aa13.58□□□□□ -0.24
LAMA3-204ENST00000585600 Q8N1X5 172 aa13.57□□□□□ -0.24
LAMA3-204ENST00000585600 PLA2G1BP04054 148 aaKnown RBP13.55□□□□□ -0.24
LAMA3-204ENST00000585600 SRRM2Q9UQ35 2752 aaKnown RBP13.55□□□□□ -0.24
LAMA3-204ENST00000585600 KLKP1Q107X0 134 aa13.54□□□□□ -0.24
LAMA3-204ENST00000585600 DSCR10P59022 87 aa13.52□□□□□ -0.25
LAMA3-204ENST00000585600 A0A0G2JQZ4 141 aa13.5□□□□□ -0.25
LAMA3-204ENST00000585600 RPS28P62857 69 aaKnown RBP13.5□□□□□ -0.25
LAMA3-204ENST00000585600 SPINK6Q6UWN8 80 aa13.5□□□□□ -0.25
LAMA3-204ENST00000585600 OCR1Q9BZK8 76 aa13.49□□□□□ -0.25
LAMA3-204ENST00000585600 A0A087WSZ3 146 aa13.46□□□□□ -0.26
LAMA3-204ENST00000585600 H7BZZ5 65 aa13.43□□□□□ -0.26
LAMA3-204ENST00000585600 J3KT08 172 aa13.42□□□□□ -0.26
LAMA3-204ENST00000585600 K7EQZ3 153 aa13.42□□□□□ -0.26
LAMA3-204ENST00000585600 ANAPC11Q9NYG5 84 aa13.42□□□□□ -0.26
LAMA3-204ENST00000585600 HERC2O95714 4834 aa13.42□□□□□ -0.26
LAMA3-204ENST00000585600 NDUFC1O43677 76 aa13.41□□□□□ -0.26
LAMA3-204ENST00000585600 KRTAP4-5Q9BYR2 181 aa13.41□□□□□ -0.26
LAMA3-204ENST00000585600 ZNF706Q9Y5V0 76 aaPredicted RBP13.41□□□□□ -0.26
LAMA3-204ENST00000585600 KRTAP1-4P0C5Y4 121 aa13.4□□□□□ -0.26
LAMA3-204ENST00000585600 LINC00483Q53H64 154 aa13.39□□□□□ -0.27
LAMA3-204ENST00000585600 TMEM254Q8TBM7 123 aa13.39□□□□□ -0.27
LAMA3-204ENST00000585600 SNURFQ9Y675 71 aa13.39□□□□□ -0.27
LAMA3-204ENST00000585600 PKHD1L1Q86WI1 4243 aa13.39□□□□□ -0.27
LAMA3-204ENST00000585600 HCG22E2RYF7 251 aa13.34□□□□□ -0.27
LAMA3-204ENST00000585600 FAM236DA0A1B0GTK5 79 aa13.33□□□□□ -0.28
LAMA3-204ENST00000585600 FAM236CP0DP71 79 aa13.33□□□□□ -0.28
LAMA3-204ENST00000585600 A0A0U1RQV1 116 aa13.32□□□□□ -0.28
LAMA3-204ENST00000585600 LINC00472Q9H8W2 130 aa13.32□□□□□ -0.28
LAMA3-204ENST00000585600 DEFB116Q30KQ4 102 aa13.32□□□□□ -0.28
LAMA3-204ENST00000585600 A0A087X002 238 aa13.3□□□□□ -0.28
LAMA3-204ENST00000585600 FAM229BQ4G0N7 80 aa13.27□□□□□ -0.29
LAMA3-204ENST00000585600 PRR15Q8IV56 129 aa13.25□□□□□ -0.29
LAMA3-204ENST00000585600 IGLV9-49A0A0B4J1Y8 123 aa13.25□□□□□ -0.29
LAMA3-204ENST00000585600 A8MWP4 228 aa13.25□□□□□ -0.29
LAMA3-204ENST00000585600 KRTAP13-2Q52LG2 175 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms