RNA–Protein interactions for RNA: ENST00000585395.6

LSM7-202, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-202ENST00000585395 K7ERJ3 54 aa13.46□□□□□ -0.25
LSM7-202ENST00000585395 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.46□□□□□ -0.25
LSM7-202ENST00000585395 A0A0U1RQV1 116 aa13.45□□□□□ -0.26
LSM7-202ENST00000585395 Q8NBF4 154 aa13.45□□□□□ -0.26
LSM7-202ENST00000585395 A0A1B0GX51 115 aa13.44□□□□□ -0.26
LSM7-202ENST00000585395 GHRHP01286 108 aa13.44□□□□□ -0.26
LSM7-202ENST00000585395 Q6ZQY7 126 aa13.44□□□□□ -0.26
LSM7-202ENST00000585395 OCIAD2Q56VL3 154 aa13.42□□□□□ -0.26
LSM7-202ENST00000585395 TRIAP1O43715 76 aa13.41□□□□□ -0.26
LSM7-202ENST00000585395 PPDPFLQ8WWR9 84 aa13.41□□□□□ -0.26
LSM7-202ENST00000585395 F8WEM9 126 aa13.39□□□□□ -0.27
LSM7-202ENST00000585395 LINC01547P58512 204 aaPredicted RBP13.39□□□□□ -0.27
LSM7-202ENST00000585395 FAT4Q6V0I7 4981 aa13.38□□□□□ -0.27
LSM7-202ENST00000585395 SPINK1P00995 79 aa13.37□□□□□ -0.27
LSM7-202ENST00000585395 Q8N377 158 aa13.37□□□□□ -0.27
LSM7-202ENST00000585395 DNAL4O96015 105 aa13.34□□□□□ -0.27
LSM7-202ENST00000585395 SCGB1C2P0DMR2 95 aa13.34□□□□□ -0.27
LSM7-202ENST00000585395 SMIM29Q86T20 159 aa13.33□□□□□ -0.28
LSM7-202ENST00000585395 SNHG12Q9BXW3 62 aa13.33□□□□□ -0.28
LSM7-202ENST00000585395 FAM218AQ96MZ4 157 aa13.32□□□□□ -0.28
LSM7-202ENST00000585395 H3BQ85 93 aa13.31□□□□□ -0.28
LSM7-202ENST00000585395 RPS29P62273 56 aaKnown RBP13.3□□□□□ -0.28
LSM7-202ENST00000585395 RETNLBQ9BQ08 111 aa13.3□□□□□ -0.28
LSM7-202ENST00000585395 BATFQ16520 125 aa13.29□□□□□ -0.28
LSM7-202ENST00000585395 CLEC2BQ92478 149 aa13.29□□□□□ -0.28
LSM7-202ENST00000585395 CD164Q04900 197 aa13.25□□□□□ -0.29
LSM7-202ENST00000585395 LCE2AQ5TA79 106 aaPredicted RBP13.25□□□□□ -0.29
LSM7-202ENST00000585395 LYRM7Q5U5X0 104 aa13.25□□□□□ -0.29
LSM7-202ENST00000585395 Q6JHZ5 121 aa13.25□□□□□ -0.29
LSM7-202ENST00000585395 ORMDL1Q9P0S3 153 aa13.24□□□□□ -0.29
LSM7-202ENST00000585395 LIMD2Q9BT23 127 aa13.23□□□□□ -0.29
LSM7-202ENST00000585395 TRACP01848 142 aa13.22□□□□□ -0.29
LSM7-202ENST00000585395 FABP2P12104 132 aa13.21□□□□□ -0.29
LSM7-202ENST00000585395 LST1O00453 97 aa13.2□□□□□ -0.3
LSM7-202ENST00000585395 IGLV8-61A0A075B6I0 122 aa13.19□□□□□ -0.3
LSM7-202ENST00000585395 TMEM256-PLSCR3K7ERE1 68 aa13.18□□□□□ -0.3
LSM7-202ENST00000585395 NDUFV3P56181 108 aaKnown RBP13.18□□□□□ -0.3
LSM7-202ENST00000585395 IGLV7-46A0A075B6I9 117 aa13.17□□□□□ -0.3
LSM7-202ENST00000585395 HRCT1Q6UXD1 115 aa13.17□□□□□ -0.3
LSM7-202ENST00000585395 ATXN8Q156A1 80 aa13.16□□□□□ -0.3
LSM7-202ENST00000585395 FP248Q71RG6 208 aaPredicted RBP13.15□□□□□ -0.3
LSM7-202ENST00000585395 NAA38Q9BRA0 125 aaKnown RBP13.13□□□□□ -0.31
LSM7-202ENST00000585395 TRBV20-1A0A075B6N2 111 aa13.11□□□□□ -0.31
LSM7-202ENST00000585395 H3BMG7 143 aa13.11□□□□□ -0.31
LSM7-202ENST00000585395 CDIP1Q9H305 208 aa13.11□□□□□ -0.31
LSM7-202ENST00000585395 H3BUT2 72 aa13.1□□□□□ -0.31
LSM7-202ENST00000585395 IGFL1Q6UW32 110 aa13.1□□□□□ -0.31
LSM7-202ENST00000585395 C9orf118A6NHY6 69 aa13.09□□□□□ -0.31
LSM7-202ENST00000585395 UBE2V1Q13404 147 aa13.09□□□□□ -0.31
LSM7-202ENST00000585395 TCL1BO95988 128 aa13.08□□□□□ -0.32
LSM7-202ENST00000585395 Q5XG85 94 aa13.08□□□□□ -0.32
LSM7-202ENST00000585395 TPRXLQ17RH7 258 aa13.07□□□□□ -0.32
LSM7-202ENST00000585395 A0A0G2JQZ4 141 aa13.05□□□□□ -0.32
LSM7-202ENST00000585395 TAX1BP3O14907 124 aa13.05□□□□□ -0.32
LSM7-202ENST00000585395 COL5A1-AS1Q5SY13 56 aa13.04□□□□□ -0.32
LSM7-202ENST00000585395 BAALC-AS2P0C853 105 aa13.03□□□□□ -0.32
LSM7-202ENST00000585395 TRBV7-7A0A0K0K1E9 115 aa13.02□□□□□ -0.33
LSM7-202ENST00000585395 A0A1W2PPM0 123 aa13.01□□□□□ -0.33
LSM7-202ENST00000585395 PCP4L1A6NKN8 68 aa13.01□□□□□ -0.33
LSM7-202ENST00000585395 TEN1Q86WV5 123 aa13.01□□□□□ -0.33
LSM7-202ENST00000585395 Q6Q795 121 aa13□□□□□ -0.33
LSM7-202ENST00000585395 ANKRD29Q8N6D5 301 aa13□□□□□ -0.33
LSM7-202ENST00000585395 SS18L2Q9UHA2 77 aa12.98□□□□□ -0.33
LSM7-202ENST00000585395 RBM3P98179 157 aaKnown RBP12.95□□□□□ -0.34
LSM7-202ENST00000585395 ASB16-AS1Q495Z4 193 aa12.94□□□□□ -0.34
LSM7-202ENST00000585395 DSCR8Q96T75 97 aa12.94□□□□□ -0.34
LSM7-202ENST00000585395 A0A1B0GV72 72 aa12.93□□□□□ -0.34
LSM7-202ENST00000585395 C9JAW5 83 aa12.93□□□□□ -0.34
LSM7-202ENST00000585395 JMJD7-PLA2G4BH0Y9G9 81 aa12.92□□□□□ -0.34
LSM7-202ENST00000585395 C1orf195Q5TG92 126 aa12.89□□□□□ -0.35
LSM7-202ENST00000585395 SPCS1Q9Y6A9 102 aa12.89□□□□□ -0.35
LSM7-202ENST00000585395 TRBV7-4A0A0J9YYF1 115 aa12.88□□□□□ -0.35
LSM7-202ENST00000585395 KRTAP13-3Q3SY46 172 aa12.88□□□□□ -0.35
LSM7-202ENST00000585395 A0A087WSZ3 146 aa12.86□□□□□ -0.35
LSM7-202ENST00000585395 H3BT86 120 aa12.86□□□□□ -0.35
LSM7-202ENST00000585395 CCKP06307 115 aa12.86□□□□□ -0.35
LSM7-202ENST00000585395 C21orf62-AS1Q17RA5 79 aa12.86□□□□□ -0.35
LSM7-202ENST00000585395 A0A1W2PNM2 257 aa12.85□□□□□ -0.35
LSM7-202ENST00000585395 FSIP2Q5CZC0 6907 aa12.85□□□□□ -0.35
LSM7-202ENST00000585395 PDE6GP18545 87 aa12.83□□□□□ -0.36
LSM7-202ENST00000585395 VPS25Q9BRG1 176 aa12.81□□□□□ -0.36
LSM7-202ENST00000585395 LCE2DQ5TA82 110 aaPredicted RBP12.8□□□□□ -0.36
LSM7-202ENST00000585395 CRCT1Q9UGL9 99 aa12.78□□□□□ -0.36
LSM7-202ENST00000585395 LOC110117498A0A087WWA1 95 aa12.76□□□□□ -0.37
LSM7-202ENST00000585395 K7EP34 96 aa12.75□□□□□ -0.37
LSM7-202ENST00000585395 GTF2H5Q6ZYL4 71 aa12.75□□□□□ -0.37
LSM7-202ENST00000585395 A0A1B0GW54 56 aa12.74□□□□□ -0.37
LSM7-202ENST00000585395 MUC17Q685J3 4493 aa12.72□□□□□ -0.37
LSM7-202ENST00000585395 SEC61BP60468 96 aaKnown RBP12.72□□□□□ -0.37
LSM7-202ENST00000585395 MTURNQ8N3F0 131 aa12.72□□□□□ -0.37
LSM7-202ENST00000585395 OBSCN-AS1Q96MR7 158 aa12.72□□□□□ -0.37
LSM7-202ENST00000585395 Q6ZQT0 140 aa12.71□□□□□ -0.37
LSM7-202ENST00000585395 C14orf132Q9NPU4 83 aa12.71□□□□□ -0.37
LSM7-202ENST00000585395 C9orf92A6NGG3 77 aa12.68□□□□□ -0.38
LSM7-202ENST00000585395 XP32Q5T750 250 aa12.66□□□□□ -0.38
LSM7-202ENST00000585395 SIGMAR1Q99720 223 aa12.64□□□□□ -0.39
LSM7-202ENST00000585395 IGKV4-1P06312 121 aa12.62□□□□□ -0.39
LSM7-202ENST00000585395 Q96NJ1 140 aa12.62□□□□□ -0.39
LSM7-202ENST00000585395 LINC00472Q9H8W2 130 aa12.59□□□□□ -0.39
LSM7-202ENST00000585395 J3KT08 172 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms