RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 PKD1L2Q7Z442 2459 aa8.44□□□□□ -1.06
CSNK1D-217ENST00000581241 PANO1I0J062 215 aa8.42□□□□□ -1.06
CSNK1D-217ENST00000581241 DNAH12Q6ZR08 3092 aa8.42□□□□□ -1.06
CSNK1D-217ENST00000581241 KRTAP16-1A8MUX0 517 aa8.41□□□□□ -1.06
CSNK1D-217ENST00000581241 ZFYVE26Q68DK2 2539 aa8.41□□□□□ -1.06
CSNK1D-217ENST00000581241 CEP295Q9C0D2 2601 aa8.41□□□□□ -1.06
CSNK1D-217ENST00000581241 A0A087X002 238 aa8.41□□□□□ -1.06
CSNK1D-217ENST00000581241 NOTCH2NLQ7Z3S9 236 aa8.41□□□□□ -1.06
CSNK1D-217ENST00000581241 USP9YO00507 2555 aaPredicted RBP8.4□□□□□ -1.07
CSNK1D-217ENST00000581241 CHD8Q9HCK8 2581 aa8.38□□□□□ -1.07
CSNK1D-217ENST00000581241 F8P00451 2351 aa8.38□□□□□ -1.07
CSNK1D-217ENST00000581241 PLAC4Q8WY50 150 aa8.38□□□□□ -1.07
CSNK1D-217ENST00000581241 SETD2Q9BYW2 2564 aaPredicted RBP8.35□□□□□ -1.07
CSNK1D-217ENST00000581241 UTRNP46939 3433 aa8.33□□□□□ -1.08
CSNK1D-217ENST00000581241 BPTFQ12830 3046 aa8.33□□□□□ -1.08
CSNK1D-217ENST00000581241 POLQO75417 2590 aa8.32□□□□□ -1.08
CSNK1D-217ENST00000581241 A8MU10 97 aa8.32□□□□□ -1.08
CSNK1D-217ENST00000581241 RPS29P62273 56 aaKnown RBP8.32□□□□□ -1.08
CSNK1D-217ENST00000581241 KRTAP11-1Q8IUC1 163 aa8.29□□□□□ -1.08
CSNK1D-217ENST00000581241 CEP350Q5VT06 3117 aa8.29□□□□□ -1.08
CSNK1D-217ENST00000581241 MTORP42345 2549 aa8.28□□□□□ -1.08
CSNK1D-217ENST00000581241 ACANP16112 2415 aa8.26□□□□□ -1.09
CSNK1D-217ENST00000581241 KRTAP7-1Q8IUC3 87 aa8.24□□□□□ -1.09
CSNK1D-217ENST00000581241 A8MUU9 505 aa8.2□□□□□ -1.1
CSNK1D-217ENST00000581241 C20orf166-AS1Q96NR2 134 aa8.2□□□□□ -1.1
CSNK1D-217ENST00000581241 KRTAP13-1Q8IUC0 172 aa8.17□□□□□ -1.1
CSNK1D-217ENST00000581241 NDUFAF8A1L188 74 aa8.17□□□□□ -1.1
CSNK1D-217ENST00000581241 SPTBN4Q9H254 2564 aa8.16□□□□□ -1.1
CSNK1D-217ENST00000581241 FASNP49327 2511 aaKnown RBP8.15□□□□□ -1.1
CSNK1D-217ENST00000581241 Q6ZRN7 208 aaPredicted RBP8.15□□□□□ -1.1
CSNK1D-217ENST00000581241 PCNTO95613 3336 aa8.14□□□□□ -1.11
CSNK1D-217ENST00000581241 KRTAP13-2Q52LG2 175 aa8.12□□□□□ -1.11
CSNK1D-217ENST00000581241 PRRC2CQ9Y520 2896 aaKnown RBP8.08□□□□□ -1.12
CSNK1D-217ENST00000581241 CHD7Q9P2D1 2997 aa8.05□□□□□ -1.12
CSNK1D-217ENST00000581241 C5orf42Q9H799 3197 aa8□□□□□ -1.13
CSNK1D-217ENST00000581241 TNP1P09430 55 aa7.98□□□□□ -1.13
CSNK1D-217ENST00000581241 C10orf95Q9H7T3 257 aa7.96□□□□□ -1.14
CSNK1D-217ENST00000581241 HTTP42858 3142 aa7.96□□□□□ -1.14
CSNK1D-217ENST00000581241 CHD9Q3L8U1 2897 aa7.92□□□□□ -1.14
CSNK1D-217ENST00000581241 FLNAP21333 2647 aaKnown RBP7.91□□□□□ -1.14
CSNK1D-217ENST00000581241 PP632Q6XCG6 107 aa7.86□□□□□ -1.15
CSNK1D-217ENST00000581241 EPG5Q9HCE0 2579 aa7.85□□□□□ -1.15
CSNK1D-217ENST00000581241 ITPR3Q14573 2671 aa7.83□□□□□ -1.16
CSNK1D-217ENST00000581241 RANBP2P49792 3224 aaKnown RBP7.81□□□□□ -1.16
CSNK1D-217ENST00000581241 H0YAA0 97 aa7.81□□□□□ -1.16
CSNK1D-217ENST00000581241 HECTD1Q9ULT8 2610 aa7.79□□□□□ -1.16
CSNK1D-217ENST00000581241 FLNBO75369 2602 aaKnown RBP7.76□□□□□ -1.17
CSNK1D-217ENST00000581241 TRANK1O15050 2925 aa7.76□□□□□ -1.17
CSNK1D-217ENST00000581241 A0A0C4DFX4 3053 aa7.75□□□□□ -1.17
CSNK1D-217ENST00000581241 MKI67P46013 3256 aaKnown RBP7.74□□□□□ -1.17
CSNK1D-217ENST00000581241 LAMA3Q16787 3333 aa7.72□□□□□ -1.17
CSNK1D-217ENST00000581241 USP24Q9UPU5 2620 aa7.71□□□□□ -1.17
CSNK1D-217ENST00000581241 P0C880 135 aa7.71□□□□□ -1.18
CSNK1D-217ENST00000581241 MGAM2Q2M2H8 2515 aa7.7□□□□□ -1.18
CSNK1D-217ENST00000581241 ATRQ13535 2644 aa7.69□□□□□ -1.18
CSNK1D-217ENST00000581241 BRCA2P51587 3418 aa7.68□□□□□ -1.18
CSNK1D-217ENST00000581241 XP32Q5T750 250 aa7.67□□□□□ -1.18
CSNK1D-217ENST00000581241 KRTAP1-4P0C5Y4 121 aa7.67□□□□□ -1.18
CSNK1D-217ENST00000581241 CFAP54Q96N23 3096 aa7.62□□□□□ -1.19
CSNK1D-217ENST00000581241 LAMA2P24043 3122 aaKnown RBP7.62□□□□□ -1.19
CSNK1D-217ENST00000581241 KRTAP10-8P60410 259 aa7.6□□□□□ -1.19
CSNK1D-217ENST00000581241 DMBT1Q9UGM3 2413 aaPredicted RBP7.56□□□□□ -1.2
CSNK1D-217ENST00000581241 UNC80Q8N2C7 3258 aa7.56□□□□□ -1.2
CSNK1D-217ENST00000581241 MGAQ8IWI9 3026 aa7.54□□□□□ -1.2
CSNK1D-217ENST00000581241 A0A1B0GVY2 172 aa7.52□□□□□ -1.2
CSNK1D-217ENST00000581241 HELZ2Q9BYK8 2649 aaKnown RBP7.5□□□□□ -1.21
CSNK1D-217ENST00000581241 PRUNE2Q8WUY3 3088 aa7.5□□□□□ -1.21
CSNK1D-217ENST00000581241 MAST4O15021 2626 aa7.49□□□□□ -1.21
CSNK1D-217ENST00000581241 NBEAL1Q6ZS30 2694 aa7.48□□□□□ -1.21
CSNK1D-217ENST00000581241 CENPEQ02224 2701 aa7.48□□□□□ -1.21
CSNK1D-217ENST00000581241 ZNF292O60281 2723 aa7.48□□□□□ -1.21
CSNK1D-217ENST00000581241 GCN1Q92616 2671 aaKnown RBP7.48□□□□□ -1.21
CSNK1D-217ENST00000581241 WDFY4Q6ZS81 3184 aa7.47□□□□□ -1.21
CSNK1D-217ENST00000581241 TPRXLQ17RH7 258 aa7.47□□□□□ -1.21
CSNK1D-217ENST00000581241 CHD6Q8TD26 2715 aa7.46□□□□□ -1.21
CSNK1D-217ENST00000581241 CDH23Q9H251 3354 aa7.46□□□□□ -1.22
CSNK1D-217ENST00000581241 TRIOO75962 3097 aa7.44□□□□□ -1.22
CSNK1D-217ENST00000581241 XIRP2A4UGR9 3374 aa7.43□□□□□ -1.22
CSNK1D-217ENST00000581241 CFAP46Q8IYW2 2715 aa7.43□□□□□ -1.22
CSNK1D-217ENST00000581241 UNC79Q9P2D8 2635 aa7.41□□□□□ -1.22
CSNK1D-217ENST00000581241 KRTAP13-3Q3SY46 172 aa7.4□□□□□ -1.22
CSNK1D-217ENST00000581241 KRTAP21-3Q3LHN1 58 aa7.39□□□□□ -1.23
CSNK1D-217ENST00000581241 AKAP13Q12802 2813 aa7.38□□□□□ -1.23
CSNK1D-217ENST00000581241 VPS13AQ96RL7 3174 aa7.37□□□□□ -1.23
CSNK1D-217ENST00000581241 FLG2Q5D862 2391 aaPredicted RBP7.37□□□□□ -1.23
CSNK1D-217ENST00000581241 PRO2289Q9P1D8 64 aa7.34□□□□□ -1.23
CSNK1D-217ENST00000581241 NBEAL2Q6ZNJ1 2754 aa7.33□□□□□ -1.24
CSNK1D-217ENST00000581241 KRTAP12-2P59991 146 aa7.32□□□□□ -1.24
CSNK1D-217ENST00000581241 KRTAP10-10P60014 251 aa7.32□□□□□ -1.24
CSNK1D-217ENST00000581241 KMT2BQ9UMN6 2715 aaPredicted RBP7.32□□□□□ -1.24
CSNK1D-217ENST00000581241 TEP1Q99973 2627 aaKnown RBP7.3□□□□□ -1.24
CSNK1D-217ENST00000581241 FRYQ5TBA9 3013 aa7.28□□□□□ -1.24
CSNK1D-217ENST00000581241 TEX15Q9BXT5 2789 aa7.28□□□□□ -1.24
CSNK1D-217ENST00000581241 SZT2Q5T011 3432 aa7.28□□□□□ -1.24
CSNK1D-217ENST00000581241 DSPP15924 2871 aaKnown RBP7.27□□□□□ -1.24
CSNK1D-217ENST00000581241 DNAH14Q0VDD8 3507 aa7.27□□□□□ -1.24
CSNK1D-217ENST00000581241 VCANP13611 3396 aa7.26□□□□□ -1.25
CSNK1D-217ENST00000581241 LAMA1P25391 3075 aa7.25□□□□□ -1.25
CSNK1D-217ENST00000581241 CELSR3Q9NYQ7 3312 aa7.25□□□□□ -1.25
CSNK1D-217ENST00000581241 SETXQ7Z333 2677 aaKnown RBP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms