RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 Q6ZQY7 126 aa8.23□□□□□ -1.09
SS18-212ENST00000579061 CFC1BP0CG36 223 aa8.22□□□□□ -1.09
SS18-212ENST00000579061 CFC1P0CG37 223 aa8.22□□□□□ -1.09
SS18-212ENST00000579061 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.22□□□□□ -1.09
SS18-212ENST00000579061 A0A0B4J2C4 111 aa8.21□□□□□ -1.1
SS18-212ENST00000579061 F8WEM9 126 aa8.21□□□□□ -1.1
SS18-212ENST00000579061 TSTD3H0UI37 97 aa8.21□□□□□ -1.1
SS18-212ENST00000579061 SEC61BP60468 96 aaKnown RBP8.21□□□□□ -1.1
SS18-212ENST00000579061 C2orf91Q6ZV80 131 aa8.21□□□□□ -1.1
SS18-212ENST00000579061 XP32Q5T750 250 aa8.2□□□□□ -1.1
SS18-212ENST00000579061 PPDPFLQ8WWR9 84 aa8.2□□□□□ -1.1
SS18-212ENST00000579061 RAB37Q96AX2 223 aa8.2□□□□□ -1.1
SS18-212ENST00000579061 IGLV8-61A0A075B6I0 122 aa8.19□□□□□ -1.1
SS18-212ENST00000579061 UQCR10Q9UDW1 63 aa8.19□□□□□ -1.1
SS18-212ENST00000579061 Q6JHZ5 121 aa8.18□□□□□ -1.1
SS18-212ENST00000579061 CEND1Q8N111 149 aa8.18□□□□□ -1.1
SS18-212ENST00000579061 A0A0G2JQZ4 141 aa8.17□□□□□ -1.1
SS18-212ENST00000579061 H0YGX0 51 aa8.17□□□□□ -1.1
SS18-212ENST00000579061 TMEM238LA0A1B0GVL6 79 aa8.16□□□□□ -1.1
SS18-212ENST00000579061 A6NJY4 79 aa8.16□□□□□ -1.1
SS18-212ENST00000579061 SNCGO76070 127 aa8.16□□□□□ -1.1
SS18-212ENST00000579061 TCL1BO95988 128 aa8.15□□□□□ -1.1
SS18-212ENST00000579061 OCIAD2Q56VL3 154 aa8.15□□□□□ -1.1
SS18-212ENST00000579061 C1orf195Q5TG92 126 aa8.15□□□□□ -1.1
SS18-212ENST00000579061 CLEC2BQ92478 149 aa8.14□□□□□ -1.11
SS18-212ENST00000579061 SNHG12Q9BXW3 62 aa8.13□□□□□ -1.11
SS18-212ENST00000579061 PRO1854Q9UHT4 67 aa8.13□□□□□ -1.11
SS18-212ENST00000579061 FAT4Q6V0I7 4981 aa8.13□□□□□ -1.11
SS18-212ENST00000579061 IGFL1Q6UW32 110 aa8.12□□□□□ -1.11
SS18-212ENST00000579061 KRTAP3-3Q9BYR6 98 aa8.12□□□□□ -1.11
SS18-212ENST00000579061 KRTAP3-2Q9BYR7 98 aa8.12□□□□□ -1.11
SS18-212ENST00000579061 A0A1B0GX51 115 aa8.11□□□□□ -1.11
SS18-212ENST00000579061 FXYD2P54710 66 aa8.11□□□□□ -1.11
SS18-212ENST00000579061 LCE2AQ5TA79 106 aaPredicted RBP8.11□□□□□ -1.11
SS18-212ENST00000579061 TRBV7-7A0A0K0K1E9 115 aa8.1□□□□□ -1.11
SS18-212ENST00000579061 C9orf92A6NGG3 77 aa8.1□□□□□ -1.11
SS18-212ENST00000579061 FAM218AQ96MZ4 157 aa8.09□□□□□ -1.11
SS18-212ENST00000579061 KRTAP4-1Q9BYQ7 146 aa8.09□□□□□ -1.11
SS18-212ENST00000579061 GHRHP01286 108 aa8.08□□□□□ -1.12
SS18-212ENST00000579061 HSD52Q0P140 79 aa8.08□□□□□ -1.12
SS18-212ENST00000579061 PCP4L1A6NKN8 68 aa8.07□□□□□ -1.12
SS18-212ENST00000579061 NDUFV3P56181 108 aaKnown RBP8.05□□□□□ -1.12
SS18-212ENST00000579061 H3BUT2 72 aa8.04□□□□□ -1.12
SS18-212ENST00000579061 TRIAP1O43715 76 aa8.04□□□□□ -1.12
SS18-212ENST00000579061 Q6Q795 121 aa8.04□□□□□ -1.12
SS18-212ENST00000579061 M0R143 59 aa8.03□□□□□ -1.12
SS18-212ENST00000579061 PCOTHQ58A44 107 aa8.02□□□□□ -1.13
SS18-212ENST00000579061 H3BQ85 93 aa8□□□□□ -1.13
SS18-212ENST00000579061 TEN1Q86WV5 123 aa8□□□□□ -1.13
SS18-212ENST00000579061 SS18L2Q9UHA2 77 aa8□□□□□ -1.13
SS18-212ENST00000579061 LST1O00453 97 aa7.99□□□□□ -1.13
SS18-212ENST00000579061 COX6CP09669 75 aa7.99□□□□□ -1.13
SS18-212ENST00000579061 H3BMG7 143 aa7.98□□□□□ -1.13
SS18-212ENST00000579061 DNAL4O96015 105 aa7.98□□□□□ -1.13
SS18-212ENST00000579061 FABP2P12104 132 aa7.98□□□□□ -1.13
SS18-212ENST00000579061 PSMB2P49721 201 aa7.98□□□□□ -1.13
SS18-212ENST00000579061 RPL37P61927 97 aaKnown RBP7.98□□□□□ -1.13
SS18-212ENST00000579061 BATFQ16520 125 aa7.98□□□□□ -1.13
SS18-212ENST00000579061 K7ERJ3 54 aa7.97□□□□□ -1.13
SS18-212ENST00000579061 ORMDL1Q9P0S3 153 aa7.97□□□□□ -1.13
SS18-212ENST00000579061 TMEM256-PLSCR3K7ERE1 68 aa7.93□□□□□ -1.14
SS18-212ENST00000579061 A0A087WSZ3 146 aa7.92□□□□□ -1.14
SS18-212ENST00000579061 A0A1W2PNM2 257 aa7.9□□□□□ -1.14
SS18-212ENST00000579061 TRACP01848 142 aa7.9□□□□□ -1.14
SS18-212ENST00000579061 ANKRD29Q8N6D5 301 aa7.9□□□□□ -1.14
SS18-212ENST00000579061 UBE2V1Q13404 147 aa7.89□□□□□ -1.15
SS18-212ENST00000579061 Q75L30 129 aa7.89□□□□□ -1.15
SS18-212ENST00000579061 OBSCN-AS1Q96MR7 158 aa7.89□□□□□ -1.15
SS18-212ENST00000579061 TRBV7-4A0A0J9YYF1 115 aa7.88□□□□□ -1.15
SS18-212ENST00000579061 KRTAP19-2Q3LHN2 52 aa7.88□□□□□ -1.15
SS18-212ENST00000579061 COL5A1-AS1Q5SY13 56 aa7.88□□□□□ -1.15
SS18-212ENST00000579061 LCE2CQ5TA81 110 aa7.88□□□□□ -1.15
SS18-212ENST00000579061 Q96NJ1 140 aa7.88□□□□□ -1.15
SS18-212ENST00000579061 SCGB1C2P0DMR2 95 aa7.87□□□□□ -1.15
SS18-212ENST00000579061 ATP11AUNQ6ZP68 121 aa7.83□□□□□ -1.16
SS18-212ENST00000579061 KRTAP9-2Q9BYQ4 174 aa7.83□□□□□ -1.16
SS18-212ENST00000579061 A0A1B0GV72 72 aa7.82□□□□□ -1.16
SS18-212ENST00000579061 CCKP06307 115 aa7.82□□□□□ -1.16
SS18-212ENST00000579061 C20orf166-AS1Q96NR2 134 aa7.82□□□□□ -1.16
SS18-212ENST00000579061 RBM3P98179 157 aaKnown RBP7.8□□□□□ -1.16
SS18-212ENST00000579061 A8MUU9 505 aa7.79□□□□□ -1.16
SS18-212ENST00000579061 LYRM7Q5U5X0 104 aa7.79□□□□□ -1.16
SS18-212ENST00000579061 SIGMAR1Q99720 223 aa7.79□□□□□ -1.16
SS18-212ENST00000579061 IGKV4-1P06312 121 aa7.78□□□□□ -1.16
SS18-212ENST00000579061 BAALC-AS2P0C853 105 aa7.78□□□□□ -1.16
SS18-212ENST00000579061 MT1HP80294 61 aa7.78□□□□□ -1.16
SS18-212ENST00000579061 DSCR8Q96T75 97 aa7.78□□□□□ -1.16
SS18-212ENST00000579061 C9orf118A6NHY6 69 aa7.77□□□□□ -1.17
SS18-212ENST00000579061 TAX1BP3O14907 124 aa7.77□□□□□ -1.17
SS18-212ENST00000579061 LINC00472Q9H8W2 130 aa7.77□□□□□ -1.17
SS18-212ENST00000579061 ATXN8Q156A1 80 aa7.76□□□□□ -1.17
SS18-212ENST00000579061 C21orf62-AS1Q17RA5 79 aa7.76□□□□□ -1.17
SS18-212ENST00000579061 DSCR10P59022 87 aa7.75□□□□□ -1.17
SS18-212ENST00000579061 LINC00313P59037 77 aa7.74□□□□□ -1.17
SS18-212ENST00000579061 NAA38Q9BRA0 125 aaKnown RBP7.74□□□□□ -1.17
SS18-212ENST00000579061 C9JAW5 83 aa7.73□□□□□ -1.17
SS18-212ENST00000579061 COX6B2Q6YFQ2 88 aa7.73□□□□□ -1.17
SS18-212ENST00000579061 VPS25Q9BRG1 176 aa7.73□□□□□ -1.17
SS18-212ENST00000579061 A0A1W2PPM0 123 aa7.72□□□□□ -1.17
SS18-212ENST00000579061 JMJD7-PLA2G4BH0Y9G9 81 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms