RNA–Protein interactions for RNA: ENST00000578415.1

TSEN54-205, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 994 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-205ENST00000578415 ZNF815PA8K554 130 aa11.02□□□□□ -0.65
TSEN54-205ENST00000578415 PCP2Q8IVA1 136 aa11.02□□□□□ -0.65
TSEN54-205ENST00000578415 TRBV7-6A0A0J9YX20 115 aa11.01□□□□□ -0.65
TSEN54-205ENST00000578415 C14orf144Q96I85 54 aa10.99□□□□□ -0.65
TSEN54-205ENST00000578415 A0A1B0GWB2 263 aa10.97□□□□□ -0.65
TSEN54-205ENST00000578415 COX8AP10176 69 aa10.97□□□□□ -0.65
TSEN54-205ENST00000578415 SCGB1D4Q6XE38 83 aa10.96□□□□□ -0.65
TSEN54-205ENST00000578415 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.95□□□□□ -0.66
TSEN54-205ENST00000578415 C12orf57Q99622 126 aa10.95□□□□□ -0.66
TSEN54-205ENST00000578415 KRTAP9-7A8MTY7 169 aa10.94□□□□□ -0.66
TSEN54-205ENST00000578415 TCL1BO95988 128 aa10.94□□□□□ -0.66
TSEN54-205ENST00000578415 DLEU1O43261 78 aa10.9□□□□□ -0.66
TSEN54-205ENST00000578415 Q6Q795 121 aa10.9□□□□□ -0.66
TSEN54-205ENST00000578415 A6NDN8 102 aa10.88□□□□□ -0.67
TSEN54-205ENST00000578415 UQCR10Q9UDW1 63 aa10.87□□□□□ -0.67
TSEN54-205ENST00000578415 A4D1N5 150 aa10.86□□□□□ -0.67
TSEN54-205ENST00000578415 USH2AO75445 5202 aa10.85□□□□□ -0.67
TSEN54-205ENST00000578415 SSPOA2VEC9 5147 aa10.85□□□□□ -0.67
TSEN54-205ENST00000578415 IFITM1P13164 125 aa10.84□□□□□ -0.67
TSEN54-205ENST00000578415 Q75L30 129 aa10.84□□□□□ -0.67
TSEN54-205ENST00000578415 OBSCN-AS1Q96MR7 158 aa10.84□□□□□ -0.67
TSEN54-205ENST00000578415 KRTAP9-8Q9BYQ0 159 aa10.84□□□□□ -0.67
TSEN54-205ENST00000578415 NHP2Q9NX24 153 aaKnown RBP10.84□□□□□ -0.67
TSEN54-205ENST00000578415 ATP11AUNQ6ZP68 121 aa10.83□□□□□ -0.68
TSEN54-205ENST00000578415 C2orf91Q6ZV80 131 aa10.82□□□□□ -0.68
TSEN54-205ENST00000578415 SMIM11BQ8TCY0 68 aa10.82□□□□□ -0.68
TSEN54-205ENST00000578415 COPS9Q8WXC6 57 aa10.82□□□□□ -0.68
TSEN54-205ENST00000578415 HIGD1BQ9P298 99 aa10.82□□□□□ -0.68
TSEN54-205ENST00000578415 F8WEM9 126 aa10.81□□□□□ -0.68
TSEN54-205ENST00000578415 TSTD3H0UI37 97 aa10.81□□□□□ -0.68
TSEN54-205ENST00000578415 MUSTN1Q8IVN3 82 aa10.81□□□□□ -0.68
TSEN54-205ENST00000578415 HIST1H4GQ99525 98 aa10.81□□□□□ -0.68
TSEN54-205ENST00000578415 TRBV7-7A0A0K0K1E9 115 aa10.8□□□□□ -0.68
TSEN54-205ENST00000578415 CFC1P0CG37 223 aa10.8□□□□□ -0.68
TSEN54-205ENST00000578415 Q6ZVH6 145 aa10.79□□□□□ -0.68
TSEN54-205ENST00000578415 IGFL1Q6UW32 110 aa10.77□□□□□ -0.69
TSEN54-205ENST00000578415 CLEC2BQ92478 149 aa10.77□□□□□ -0.69
TSEN54-205ENST00000578415 TRAV13-2A0A0B4J235 113 aa10.76□□□□□ -0.69
TSEN54-205ENST00000578415 Q6JHZ5 121 aa10.76□□□□□ -0.69
TSEN54-205ENST00000578415 LINC00575Q6W349 94 aa10.74□□□□□ -0.69
TSEN54-205ENST00000578415 Q6ZQY7 126 aa10.73□□□□□ -0.69
TSEN54-205ENST00000578415 HSD52Q0P140 79 aa10.72□□□□□ -0.69
TSEN54-205ENST00000578415 CEND1Q8N111 149 aa10.71□□□□□ -0.69
TSEN54-205ENST00000578415 OCIAD2Q56VL3 154 aa10.7□□□□□ -0.7
TSEN54-205ENST00000578415 Q96NJ1 140 aa10.69□□□□□ -0.7
TSEN54-205ENST00000578415 VAMP3Q15836 100 aa10.68□□□□□ -0.7
TSEN54-205ENST00000578415 FCGBPQ9Y6R7 5405 aaPredicted RBP10.67□□□□□ -0.7
TSEN54-205ENST00000578415 hADV29S1A0JD25 119 aa10.67□□□□□ -0.7
TSEN54-205ENST00000578415 FXYD2P54710 66 aa10.66□□□□□ -0.7
TSEN54-205ENST00000578415 C20orf166-AS1Q96NR2 134 aa10.66□□□□□ -0.7
TSEN54-205ENST00000578415 LST1O00453 97 aa10.65□□□□□ -0.7
TSEN54-205ENST00000578415 TMEM238LA0A1B0GVL6 79 aa10.64□□□□□ -0.71
TSEN54-205ENST00000578415 A6NJY4 79 aa10.64□□□□□ -0.71
TSEN54-205ENST00000578415 PCP4L1A6NKN8 68 aa10.64□□□□□ -0.71
TSEN54-205ENST00000578415 A8MUU9 505 aa10.63□□□□□ -0.71
TSEN54-205ENST00000578415 MT2AP02795 61 aa10.63□□□□□ -0.71
TSEN54-205ENST00000578415 BVES-AS1Q5T3Y7 98 aa10.63□□□□□ -0.71
TSEN54-205ENST00000578415 M0R143 59 aa10.62□□□□□ -0.71
TSEN54-205ENST00000578415 RAB37Q96AX2 223 aa10.61□□□□□ -0.71
TSEN54-205ENST00000578415 TRBV20-1A0A075B6N2 111 aa10.6□□□□□ -0.71
TSEN54-205ENST00000578415 H3BUT2 72 aa10.6□□□□□ -0.71
TSEN54-205ENST00000578415 BATFQ16520 125 aa10.59□□□□□ -0.71
TSEN54-205ENST00000578415 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.59□□□□□ -0.71
TSEN54-205ENST00000578415 KRTAP19-1Q8IUB9 90 aa10.59□□□□□ -0.71
TSEN54-205ENST00000578415 LCE2BO14633 110 aa10.58□□□□□ -0.72
TSEN54-205ENST00000578415 A0A0B4J2C4 111 aa10.57□□□□□ -0.72
TSEN54-205ENST00000578415 PPDPFLQ8WWR9 84 aa10.57□□□□□ -0.72
TSEN54-205ENST00000578415 K7ERJ3 54 aa10.55□□□□□ -0.72
TSEN54-205ENST00000578415 MT1FP04733 61 aa10.55□□□□□ -0.72
TSEN54-205ENST00000578415 SNHG12Q9BXW3 62 aa10.55□□□□□ -0.72
TSEN54-205ENST00000578415 PRO1854Q9UHT4 67 aa10.54□□□□□ -0.72
TSEN54-205ENST00000578415 SS18L2Q9UHA2 77 aa10.53□□□□□ -0.72
TSEN54-205ENST00000578415 KRTAP9-3Q9BYQ3 159 aa10.51□□□□□ -0.73
TSEN54-205ENST00000578415 KRTAP16-1A8MUX0 517 aa10.5□□□□□ -0.73
TSEN54-205ENST00000578415 DSCR10P59022 87 aa10.48□□□□□ -0.73
TSEN54-205ENST00000578415 TEN1Q86WV5 123 aa10.47□□□□□ -0.73
TSEN54-205ENST00000578415 A0A087WSZ3 146 aa10.45□□□□□ -0.74
TSEN54-205ENST00000578415 FAM236DA0A1B0GTK5 79 aa10.45□□□□□ -0.74
TSEN54-205ENST00000578415 FAM236CP0DP71 79 aa10.45□□□□□ -0.74
TSEN54-205ENST00000578415 MPLKIPQ8TAP9 179 aa10.44□□□□□ -0.74
TSEN54-205ENST00000578415 PSMB2P49721 201 aa10.43□□□□□ -0.74
TSEN54-205ENST00000578415 KRTAP10-10P60014 251 aa10.43□□□□□ -0.74
TSEN54-205ENST00000578415 HRES1P13985 223 aa10.41□□□□□ -0.74
TSEN54-205ENST00000578415 NDUFV3P56181 108 aaKnown RBP10.4□□□□□ -0.74
TSEN54-205ENST00000578415 NAA38Q9BRA0 125 aaKnown RBP10.4□□□□□ -0.74
TSEN54-205ENST00000578415 TRIAP1O43715 76 aa10.39□□□□□ -0.75
TSEN54-205ENST00000578415 COL5A1-AS1Q5SY13 56 aa10.39□□□□□ -0.75
TSEN54-205ENST00000578415 TAX1BP3O14907 124 aa10.37□□□□□ -0.75
TSEN54-205ENST00000578415 COX6CP09669 75 aa10.37□□□□□ -0.75
TSEN54-205ENST00000578415 SCGB1C2P0DMR2 95 aa10.37□□□□□ -0.75
TSEN54-205ENST00000578415 SIGMAR1Q99720 223 aa10.37□□□□□ -0.75
TSEN54-205ENST00000578415 RBM12B-AS1Q9P1G2 102 aa10.36□□□□□ -0.75
TSEN54-205ENST00000578415 FAM218AQ96MZ4 157 aa10.35□□□□□ -0.75
TSEN54-205ENST00000578415 MACF1Q9UPN3 7388 aaKnown RBP10.35□□□□□ -0.75
TSEN54-205ENST00000578415 C9orf118A6NHY6 69 aa10.34□□□□□ -0.75
TSEN54-205ENST00000578415 H0YGX0 51 aa10.34□□□□□ -0.75
TSEN54-205ENST00000578415 LINC00313P59037 77 aa10.34□□□□□ -0.75
TSEN54-205ENST00000578415 SYNE2Q8WXH0 6885 aaKnown RBP10.32□□□□□ -0.76
TSEN54-205ENST00000578415 H3BMG7 143 aa10.32□□□□□ -0.76
TSEN54-205ENST00000578415 NOTCH2NLQ7Z3S9 236 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms