RNA–Protein interactions for RNA: ENST00000578297.1

LIMD2-204, Transcript of LIM domain containing 2, humanhuman

TSL 2

Gene LIMD2, Length 760 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-204ENST00000578297 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.04□□□□□ -0.32
LIMD2-204ENST00000578297 CD164Q04900 197 aa13.03□□□□□ -0.32
LIMD2-204ENST00000578297 HRCT1Q6UXD1 115 aa13.02□□□□□ -0.33
LIMD2-204ENST00000578297 H0YGX0 51 aa13.01□□□□□ -0.33
LIMD2-204ENST00000578297 LIMD2Q9BT23 127 aa13□□□□□ -0.33
LIMD2-204ENST00000578297 CDIP1Q9H305 208 aa12.99□□□□□ -0.33
LIMD2-204ENST00000578297 PPDPFLQ8WWR9 84 aa12.98□□□□□ -0.33
LIMD2-204ENST00000578297 F8WEM9 126 aa12.97□□□□□ -0.33
LIMD2-204ENST00000578297 SNCGO76070 127 aa12.97□□□□□ -0.33
LIMD2-204ENST00000578297 KRTAP13-3Q3SY46 172 aa12.94□□□□□ -0.34
LIMD2-204ENST00000578297 FAM218AQ96MZ4 157 aa12.94□□□□□ -0.34
LIMD2-204ENST00000578297 A0A0G2JQZ4 141 aa12.93□□□□□ -0.34
LIMD2-204ENST00000578297 IGLV8-61A0A075B6I0 122 aa12.92□□□□□ -0.34
LIMD2-204ENST00000578297 OCIAD2Q56VL3 154 aa12.92□□□□□ -0.34
LIMD2-204ENST00000578297 A0A1B0GX51 115 aa12.91□□□□□ -0.34
LIMD2-204ENST00000578297 TRIAP1O43715 76 aa12.91□□□□□ -0.34
LIMD2-204ENST00000578297 Q5XG85 94 aa12.91□□□□□ -0.34
LIMD2-204ENST00000578297 K7ERJ3 54 aa12.9□□□□□ -0.34
LIMD2-204ENST00000578297 SNHG12Q9BXW3 62 aa12.9□□□□□ -0.34
LIMD2-204ENST00000578297 Q6JHZ5 121 aa12.89□□□□□ -0.35
LIMD2-204ENST00000578297 SMIM6P0DI80 62 aa12.87□□□□□ -0.35
LIMD2-204ENST00000578297 PSMB2P49721 201 aa12.84□□□□□ -0.35
LIMD2-204ENST00000578297 IGFL1Q6UW32 110 aa12.84□□□□□ -0.35
LIMD2-204ENST00000578297 CLEC2BQ92478 149 aa12.84□□□□□ -0.35
LIMD2-204ENST00000578297 MUC17Q685J3 4493 aa12.83□□□□□ -0.36
LIMD2-204ENST00000578297 MUC2Q02817 5179 aa12.82□□□□□ -0.36
LIMD2-204ENST00000578297 GHRHP01286 108 aa12.82□□□□□ -0.36
LIMD2-204ENST00000578297 COX6CP09669 75 aa12.82□□□□□ -0.36
LIMD2-204ENST00000578297 TCL1BO95988 128 aa12.79□□□□□ -0.36
LIMD2-204ENST00000578297 NDUFV3P56181 108 aaKnown RBP12.79□□□□□ -0.36
LIMD2-204ENST00000578297 H3BUT2 72 aa12.78□□□□□ -0.36
LIMD2-204ENST00000578297 C1orf195Q5TG92 126 aa12.78□□□□□ -0.36
LIMD2-204ENST00000578297 TRBV7-7A0A0K0K1E9 115 aa12.76□□□□□ -0.37
LIMD2-204ENST00000578297 DNAL4O96015 105 aa12.75□□□□□ -0.37
LIMD2-204ENST00000578297 FABP2P12104 132 aa12.74□□□□□ -0.37
LIMD2-204ENST00000578297 LOC105371267A0A1B0GV96 52 aa12.73□□□□□ -0.37
LIMD2-204ENST00000578297 M0R143 59 aa12.73□□□□□ -0.37
LIMD2-204ENST00000578297 H3BQ85 93 aa12.72□□□□□ -0.37
LIMD2-204ENST00000578297 ASB16-AS1Q495Z4 193 aa12.72□□□□□ -0.37
LIMD2-204ENST00000578297 ORMDL1Q9P0S3 153 aa12.72□□□□□ -0.37
LIMD2-204ENST00000578297 XP32Q5T750 250 aa12.71□□□□□ -0.37
LIMD2-204ENST00000578297 H3BMG7 143 aa12.7□□□□□ -0.38
LIMD2-204ENST00000578297 Q6Q795 121 aa12.69□□□□□ -0.38
LIMD2-204ENST00000578297 SCGB1C2P0DMR2 95 aa12.68□□□□□ -0.38
LIMD2-204ENST00000578297 TSTD3H0UI37 97 aa12.67□□□□□ -0.38
LIMD2-204ENST00000578297 TMEM256-PLSCR3K7ERE1 68 aa12.66□□□□□ -0.38
LIMD2-204ENST00000578297 SEC61BP60468 96 aaKnown RBP12.66□□□□□ -0.38
LIMD2-204ENST00000578297 C9orf92A6NGG3 77 aa12.65□□□□□ -0.38
LIMD2-204ENST00000578297 TRACP01848 142 aa12.65□□□□□ -0.38
LIMD2-204ENST00000578297 TEN1Q86WV5 123 aa12.65□□□□□ -0.38
LIMD2-204ENST00000578297 LST1O00453 97 aa12.64□□□□□ -0.39
LIMD2-204ENST00000578297 A0A0U1RQV1 116 aa12.6□□□□□ -0.39
LIMD2-204ENST00000578297 SS18L2Q9UHA2 77 aa12.6□□□□□ -0.39
LIMD2-204ENST00000578297 UBE2V1Q13404 147 aa12.59□□□□□ -0.39
LIMD2-204ENST00000578297 A0A1W2PNM2 257 aa12.56□□□□□ -0.4
LIMD2-204ENST00000578297 ANKRD29Q8N6D5 301 aa12.56□□□□□ -0.4
LIMD2-204ENST00000578297 A0A087WSZ3 146 aa12.54□□□□□ -0.4
LIMD2-204ENST00000578297 A0A1B0GV72 72 aa12.53□□□□□ -0.4
LIMD2-204ENST00000578297 NAA38Q9BRA0 125 aaKnown RBP12.53□□□□□ -0.4
LIMD2-204ENST00000578297 TRBV7-4A0A0J9YYF1 115 aa12.51□□□□□ -0.41
LIMD2-204ENST00000578297 ATXN8Q156A1 80 aa12.5□□□□□ -0.41
LIMD2-204ENST00000578297 KRTAP4-1Q9BYQ7 146 aa12.5□□□□□ -0.41
LIMD2-204ENST00000578297 BAALC-AS2P0C853 105 aa12.49□□□□□ -0.41
LIMD2-204ENST00000578297 BATFQ16520 125 aa12.49□□□□□ -0.41
LIMD2-204ENST00000578297 RBM3P98179 157 aaKnown RBP12.46□□□□□ -0.41
LIMD2-204ENST00000578297 PCOTHQ58A44 107 aa12.45□□□□□ -0.42
LIMD2-204ENST00000578297 Q96NJ1 140 aa12.45□□□□□ -0.42
LIMD2-204ENST00000578297 CCKP06307 115 aa12.44□□□□□ -0.42
LIMD2-204ENST00000578297 LYRM7Q5U5X0 104 aa12.44□□□□□ -0.42
LIMD2-204ENST00000578297 RPL37P61927 97 aaKnown RBP12.43□□□□□ -0.42
LIMD2-204ENST00000578297 DSCR8Q96T75 97 aa12.42□□□□□ -0.42
LIMD2-204ENST00000578297 FAT4Q6V0I7 4981 aa12.42□□□□□ -0.42
LIMD2-204ENST00000578297 TRBV20-1A0A075B6N2 111 aa12.4□□□□□ -0.42
LIMD2-204ENST00000578297 OBSCN-AS1Q96MR7 158 aa12.39□□□□□ -0.43
LIMD2-204ENST00000578297 C9orf118A6NHY6 69 aa12.37□□□□□ -0.43
LIMD2-204ENST00000578297 C9JAW5 83 aa12.35□□□□□ -0.43
LIMD2-204ENST00000578297 TAX1BP3O14907 124 aa12.35□□□□□ -0.43
LIMD2-204ENST00000578297 JMJD7-PLA2G4BH0Y9G9 81 aa12.34□□□□□ -0.43
LIMD2-204ENST00000578297 VPS25Q9BRG1 176 aa12.34□□□□□ -0.43
LIMD2-204ENST00000578297 LCE2AQ5TA79 106 aaPredicted RBP12.32□□□□□ -0.44
LIMD2-204ENST00000578297 Q75L30 129 aa12.31□□□□□ -0.44
LIMD2-204ENST00000578297 SIGMAR1Q99720 223 aa12.31□□□□□ -0.44
LIMD2-204ENST00000578297 LINC00472Q9H8W2 130 aa12.31□□□□□ -0.44
LIMD2-204ENST00000578297 IGKV4-1P06312 121 aa12.3□□□□□ -0.44
LIMD2-204ENST00000578297 A0A1W2PPM0 123 aa12.29□□□□□ -0.44
LIMD2-204ENST00000578297 C21orf62-AS1Q17RA5 79 aa12.28□□□□□ -0.44
LIMD2-204ENST00000578297 LOC110117498A0A087WWA1 95 aa12.26□□□□□ -0.45
LIMD2-204ENST00000578297 Q6ZQT0 140 aa12.26□□□□□ -0.45
LIMD2-204ENST00000578297 PDE6GP18545 87 aa12.25□□□□□ -0.45
LIMD2-204ENST00000578297 DEFB116Q30KQ4 102 aa12.25□□□□□ -0.45
LIMD2-204ENST00000578297 ATP11AUNQ6ZP68 121 aa12.23□□□□□ -0.45
LIMD2-204ENST00000578297 C20orf166-AS1Q96NR2 134 aa12.23□□□□□ -0.45
LIMD2-204ENST00000578297 DSCR10P59022 87 aa12.22□□□□□ -0.45
LIMD2-204ENST00000578297 A0A1B0GW54 56 aa12.21□□□□□ -0.45
LIMD2-204ENST00000578297 A8MUU9 505 aa12.2□□□□□ -0.46
LIMD2-204ENST00000578297 H3BT86 120 aa12.2□□□□□ -0.46
LIMD2-204ENST00000578297 LINC00313P59037 77 aa12.2□□□□□ -0.46
LIMD2-204ENST00000578297 C14orf132Q9NPU4 83 aa12.2□□□□□ -0.46
LIMD2-204ENST00000578297 KRTAP19-2Q3LHN2 52 aa12.16□□□□□ -0.46
LIMD2-204ENST00000578297 COL5A1-AS1Q5SY13 56 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms