RNA–Protein interactions for RNA: ENST00000578208.1

GGA3-204, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 3

Gene GGA3, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-204ENST00000578208 CEND1Q8N111 149 aa6.54□□□□□ -1.36
GGA3-204ENST00000578208 RNF213Q63HN8 5207 aa6.53□□□□□ -1.36
GGA3-204ENST00000578208 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.53□□□□□ -1.36
GGA3-204ENST00000578208 A0A0U1RQV1 116 aa6.52□□□□□ -1.37
GGA3-204ENST00000578208 KRTAP13-3Q3SY46 172 aa6.52□□□□□ -1.37
GGA3-204ENST00000578208 PPDPFLQ8WWR9 84 aa6.51□□□□□ -1.37
GGA3-204ENST00000578208 H0YGX0 51 aa6.5□□□□□ -1.37
GGA3-204ENST00000578208 PRO1854Q9UHT4 67 aa6.5□□□□□ -1.37
GGA3-204ENST00000578208 HSD52Q0P140 79 aa6.49□□□□□ -1.37
GGA3-204ENST00000578208 Q6JHZ5 121 aa6.49□□□□□ -1.37
GGA3-204ENST00000578208 SNHG12Q9BXW3 62 aa6.49□□□□□ -1.37
GGA3-204ENST00000578208 FXYD2P54710 66 aa6.48□□□□□ -1.37
GGA3-204ENST00000578208 OCIAD2Q56VL3 154 aa6.48□□□□□ -1.37
GGA3-204ENST00000578208 TCL1BO95988 128 aa6.47□□□□□ -1.37
GGA3-204ENST00000578208 GHRHP01286 108 aa6.47□□□□□ -1.37
GGA3-204ENST00000578208 Q5XG85 94 aa6.47□□□□□ -1.37
GGA3-204ENST00000578208 UQCR10Q9UDW1 63 aa6.47□□□□□ -1.37
GGA3-204ENST00000578208 A0A0G2JQZ4 141 aa6.46□□□□□ -1.38
GGA3-204ENST00000578208 CLEC2BQ92478 149 aa6.46□□□□□ -1.38
GGA3-204ENST00000578208 IGLV8-61A0A075B6I0 122 aa6.45□□□□□ -1.38
GGA3-204ENST00000578208 A0A1B0GX51 115 aa6.45□□□□□ -1.38
GGA3-204ENST00000578208 SEC61BP60468 96 aaKnown RBP6.45□□□□□ -1.38
GGA3-204ENST00000578208 PSMB2P49721 201 aa6.44□□□□□ -1.38
GGA3-204ENST00000578208 IGFL1Q6UW32 110 aa6.44□□□□□ -1.38
GGA3-204ENST00000578208 MUC17Q685J3 4493 aa6.44□□□□□ -1.38
GGA3-204ENST00000578208 ASB16-AS1Q495Z4 193 aa6.43□□□□□ -1.38
GGA3-204ENST00000578208 FAM218AQ96MZ4 157 aa6.43□□□□□ -1.38
GGA3-204ENST00000578208 TRIAP1O43715 76 aa6.42□□□□□ -1.38
GGA3-204ENST00000578208 DNAL4O96015 105 aa6.42□□□□□ -1.38
GGA3-204ENST00000578208 COX6CP09669 75 aa6.42□□□□□ -1.38
GGA3-204ENST00000578208 XP32Q5T750 250 aa6.42□□□□□ -1.38
GGA3-204ENST00000578208 C1orf195Q5TG92 126 aa6.42□□□□□ -1.38
GGA3-204ENST00000578208 TRBV7-7A0A0K0K1E9 115 aa6.41□□□□□ -1.38
GGA3-204ENST00000578208 C9orf92A6NGG3 77 aa6.41□□□□□ -1.38
GGA3-204ENST00000578208 H3BUT2 72 aa6.41□□□□□ -1.38
GGA3-204ENST00000578208 K7ERJ3 54 aa6.41□□□□□ -1.38
GGA3-204ENST00000578208 FABP2P12104 132 aa6.4□□□□□ -1.38
GGA3-204ENST00000578208 NDUFV3P56181 108 aaKnown RBP6.4□□□□□ -1.38
GGA3-204ENST00000578208 H3BQ85 93 aa6.38□□□□□ -1.39
GGA3-204ENST00000578208 H3BMG7 143 aa6.37□□□□□ -1.39
GGA3-204ENST00000578208 ORMDL1Q9P0S3 153 aa6.37□□□□□ -1.39
GGA3-204ENST00000578208 SS18L2Q9UHA2 77 aa6.37□□□□□ -1.39
GGA3-204ENST00000578208 MUC2Q02817 5179 aa6.37□□□□□ -1.39
GGA3-204ENST00000578208 LST1O00453 97 aa6.35□□□□□ -1.39
GGA3-204ENST00000578208 SMIM6P0DI80 62 aa6.35□□□□□ -1.39
GGA3-204ENST00000578208 SCGB1C2P0DMR2 95 aa6.35□□□□□ -1.39
GGA3-204ENST00000578208 TEN1Q86WV5 123 aa6.35□□□□□ -1.39
GGA3-204ENST00000578208 M0R143 59 aa6.34□□□□□ -1.39
GGA3-204ENST00000578208 Q6Q795 121 aa6.34□□□□□ -1.39
GGA3-204ENST00000578208 TMEM256-PLSCR3K7ERE1 68 aa6.33□□□□□ -1.4
GGA3-204ENST00000578208 A0A087WSZ3 146 aa6.31□□□□□ -1.4
GGA3-204ENST00000578208 TRACP01848 142 aa6.31□□□□□ -1.4
GGA3-204ENST00000578208 PCOTHQ58A44 107 aa6.31□□□□□ -1.4
GGA3-204ENST00000578208 ANKRD29Q8N6D5 301 aa6.31□□□□□ -1.4
GGA3-204ENST00000578208 A0A1B0GV72 72 aa6.3□□□□□ -1.4
GGA3-204ENST00000578208 TSTD3H0UI37 97 aa6.28□□□□□ -1.4
GGA3-204ENST00000578208 RPL37P61927 97 aaKnown RBP6.28□□□□□ -1.4
GGA3-204ENST00000578208 UBE2V1Q13404 147 aa6.28□□□□□ -1.4
GGA3-204ENST00000578208 KRTAP4-1Q9BYQ7 146 aa6.28□□□□□ -1.4
GGA3-204ENST00000578208 A0A1W2PNM2 257 aa6.26□□□□□ -1.41
GGA3-204ENST00000578208 OBSCN-AS1Q96MR7 158 aa6.26□□□□□ -1.41
GGA3-204ENST00000578208 FAT4Q6V0I7 4981 aa6.25□□□□□ -1.41
GGA3-204ENST00000578208 TRBV7-4A0A0J9YYF1 115 aa6.25□□□□□ -1.41
GGA3-204ENST00000578208 CCKP06307 115 aa6.24□□□□□ -1.41
GGA3-204ENST00000578208 ATXN8Q156A1 80 aa6.24□□□□□ -1.41
GGA3-204ENST00000578208 LYRM7Q5U5X0 104 aa6.24□□□□□ -1.41
GGA3-204ENST00000578208 SIGMAR1Q99720 223 aa6.24□□□□□ -1.41
GGA3-204ENST00000578208 RBM3P98179 157 aaKnown RBP6.23□□□□□ -1.41
GGA3-204ENST00000578208 DSCR8Q96T75 97 aa6.23□□□□□ -1.41
GGA3-204ENST00000578208 BAALC-AS2P0C853 105 aa6.22□□□□□ -1.41
GGA3-204ENST00000578208 BATFQ16520 125 aa6.22□□□□□ -1.41
GGA3-204ENST00000578208 LCE2AQ5TA79 106 aaPredicted RBP6.22□□□□□ -1.41
GGA3-204ENST00000578208 Q96NJ1 140 aa6.22□□□□□ -1.41
GGA3-204ENST00000578208 NAA38Q9BRA0 125 aaKnown RBP6.22□□□□□ -1.41
GGA3-204ENST00000578208 VPS25Q9BRG1 176 aa6.22□□□□□ -1.41
GGA3-204ENST00000578208 ATP11AUNQ6ZP68 121 aa6.2□□□□□ -1.42
GGA3-204ENST00000578208 Q75L30 129 aa6.2□□□□□ -1.42
GGA3-204ENST00000578208 LOC105371267A0A1B0GV96 52 aa6.19□□□□□ -1.42
GGA3-204ENST00000578208 IGKV4-1P06312 121 aa6.19□□□□□ -1.42
GGA3-204ENST00000578208 C21orf62-AS1Q17RA5 79 aa6.19□□□□□ -1.42
GGA3-204ENST00000578208 C9JAW5 83 aa6.18□□□□□ -1.42
GGA3-204ENST00000578208 JMJD7-PLA2G4BH0Y9G9 81 aa6.17□□□□□ -1.42
GGA3-204ENST00000578208 TRBV20-1A0A075B6N2 111 aa6.16□□□□□ -1.42
GGA3-204ENST00000578208 DSCR10P59022 87 aa6.16□□□□□ -1.42
GGA3-204ENST00000578208 LINC00313P59037 77 aa6.14□□□□□ -1.43
GGA3-204ENST00000578208 DEFB116Q30KQ4 102 aa6.14□□□□□ -1.43
GGA3-204ENST00000578208 C20orf166-AS1Q96NR2 134 aa6.14□□□□□ -1.43
GGA3-204ENST00000578208 LINC00472Q9H8W2 130 aa6.14□□□□□ -1.43
GGA3-204ENST00000578208 A8MUU9 505 aa6.12□□□□□ -1.43
GGA3-204ENST00000578208 PDE6GP18545 87 aa6.12□□□□□ -1.43
GGA3-204ENST00000578208 COX6B2Q6YFQ2 88 aa6.12□□□□□ -1.43
GGA3-204ENST00000578208 IGHV6-1A0A0B4J1U7 121 aa6.11□□□□□ -1.43
GGA3-204ENST00000578208 C9orf118A6NHY6 69 aa6.11□□□□□ -1.43
GGA3-204ENST00000578208 LOC110117498A0A087WWA1 95 aa6.1□□□□□ -1.43
GGA3-204ENST00000578208 A0A1B0GW54 56 aa6.1□□□□□ -1.43
GGA3-204ENST00000578208 J3KT08 172 aa6.1□□□□□ -1.43
GGA3-204ENST00000578208 Q6ZQT0 140 aa6.1□□□□□ -1.43
GGA3-204ENST00000578208 A0A1W2PPM0 123 aa6.09□□□□□ -1.43
GGA3-204ENST00000578208 C8orf87E5RJ46 101 aa6.09□□□□□ -1.43
GGA3-204ENST00000578208 LCE2CQ5TA81 110 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms