RNA–Protein interactions for RNA: ENST00000577228.1

CDH8-202, Transcript of cadherin 8, humanhuman

TSL 4

Gene CDH8, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-202ENST00000577228 H7C2G1 150 aa6.33□□□□□ -1.4
CDH8-202ENST00000577228 COX7BP24311 80 aa6.33□□□□□ -1.4
CDH8-202ENST00000577228 TAL2Q16559 108 aa6.33□□□□□ -1.4
CDH8-202ENST00000577228 ELOF1P60002 83 aaKnown RBP6.32□□□□□ -1.4
CDH8-202ENST00000577228 COX6B2Q6YFQ2 88 aa6.32□□□□□ -1.4
CDH8-202ENST00000577228 DEFB105AQ8NG35 78 aa6.32□□□□□ -1.4
CDH8-202ENST00000577228 C6orf99Q4VX62 202 aa6.31□□□□□ -1.4
CDH8-202ENST00000577228 LINC00518Q8N0U6 118 aa6.31□□□□□ -1.4
CDH8-202ENST00000577228 TEX49A0A1B0GTD5 131 aa6.3□□□□□ -1.4
CDH8-202ENST00000577228 RPL37P61927 97 aaKnown RBP6.3□□□□□ -1.4
CDH8-202ENST00000577228 C1orf195Q5TG92 126 aa6.3□□□□□ -1.4
CDH8-202ENST00000577228 Q5XG85 94 aa6.3□□□□□ -1.4
CDH8-202ENST00000577228 CEND1Q8N111 149 aa6.3□□□□□ -1.4
CDH8-202ENST00000577228 A6NDN8 102 aa6.28□□□□□ -1.4
CDH8-202ENST00000577228 FXYD2P54710 66 aa6.28□□□□□ -1.4
CDH8-202ENST00000577228 HSD52Q0P140 79 aa6.28□□□□□ -1.4
CDH8-202ENST00000577228 CFC1P0CG37 223 aa6.27□□□□□ -1.41
CDH8-202ENST00000577228 SMIM29Q86T20 159 aa6.27□□□□□ -1.41
CDH8-202ENST00000577228 TRAV13-2A0A0B4J235 113 aa6.26□□□□□ -1.41
CDH8-202ENST00000577228 A0A0G2JQZ4 141 aa6.26□□□□□ -1.41
CDH8-202ENST00000577228 TRBV7-6A0A0J9YX20 115 aa6.25□□□□□ -1.41
CDH8-202ENST00000577228 SMIM11BQ8TCY0 68 aa6.25□□□□□ -1.41
CDH8-202ENST00000577228 IGLV5-48A0A075B6I7 105 aa6.24□□□□□ -1.41
CDH8-202ENST00000577228 A0A0B4J2C4 111 aa6.24□□□□□ -1.41
CDH8-202ENST00000577228 A0A1B0GWB2 263 aa6.24□□□□□ -1.41
CDH8-202ENST00000577228 TSTD3H0UI37 97 aa6.24□□□□□ -1.41
CDH8-202ENST00000577228 TMEM238LA0A1B0GVL6 79 aa6.23□□□□□ -1.41
CDH8-202ENST00000577228 A6NJY4 79 aa6.23□□□□□ -1.41
CDH8-202ENST00000577228 BVES-AS1Q5T3Y7 98 aa6.23□□□□□ -1.41
CDH8-202ENST00000577228 FLGP20930 4061 aaPredicted RBP6.22□□□□□ -1.41
CDH8-202ENST00000577228 K7ERJ3 54 aa6.22□□□□□ -1.41
CDH8-202ENST00000577228 TCL1BO95988 128 aa6.22□□□□□ -1.41
CDH8-202ENST00000577228 RAB37Q96AX2 223 aa6.22□□□□□ -1.41
CDH8-202ENST00000577228 NHP2Q9NX24 153 aaKnown RBP6.22□□□□□ -1.41
CDH8-202ENST00000577228 PRO1854Q9UHT4 67 aa6.2□□□□□ -1.42
CDH8-202ENST00000577228 Q6Q795 121 aa6.18□□□□□ -1.42
CDH8-202ENST00000577228 F8WEM9 126 aa6.17□□□□□ -1.42
CDH8-202ENST00000577228 M0R143 59 aa6.17□□□□□ -1.42
CDH8-202ENST00000577228 ATP11AUNQ6ZP68 121 aa6.15□□□□□ -1.42
CDH8-202ENST00000577228 TRIAP1O43715 76 aa6.14□□□□□ -1.43
CDH8-202ENST00000577228 VAMP3Q15836 100 aa6.14□□□□□ -1.43
CDH8-202ENST00000577228 BATFQ16520 125 aa6.14□□□□□ -1.43
CDH8-202ENST00000577228 LINC00575Q6W349 94 aa6.14□□□□□ -1.43
CDH8-202ENST00000577228 OBSCN-AS1Q96MR7 158 aa6.14□□□□□ -1.43
CDH8-202ENST00000577228 Q6JHZ5 121 aa6.13□□□□□ -1.43
CDH8-202ENST00000577228 Q75L30 129 aa6.13□□□□□ -1.43
CDH8-202ENST00000577228 TRBV7-7A0A0K0K1E9 115 aa6.12□□□□□ -1.43
CDH8-202ENST00000577228 FAM218AQ96MZ4 157 aa6.12□□□□□ -1.43
CDH8-202ENST00000577228 KRTAP9-7A8MTY7 169 aa6.11□□□□□ -1.43
CDH8-202ENST00000577228 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.11□□□□□ -1.43
CDH8-202ENST00000577228 CLEC2BQ92478 149 aa6.11□□□□□ -1.43
CDH8-202ENST00000577228 hADV29S1A0JD25 119 aa6.1□□□□□ -1.43
CDH8-202ENST00000577228 PCP4L1A6NKN8 68 aa6.1□□□□□ -1.43
CDH8-202ENST00000577228 H0YGX0 51 aa6.1□□□□□ -1.43
CDH8-202ENST00000577228 PSMB2P49721 201 aa6.1□□□□□ -1.43
CDH8-202ENST00000577228 IGFL1Q6UW32 110 aa6.1□□□□□ -1.43
CDH8-202ENST00000577228 Q6ZQY7 126 aa6.1□□□□□ -1.43
CDH8-202ENST00000577228 NAA38Q9BRA0 125 aaKnown RBP6.1□□□□□ -1.43
CDH8-202ENST00000577228 SNHG12Q9BXW3 62 aa6.1□□□□□ -1.43
CDH8-202ENST00000577228 OCIAD2Q56VL3 154 aa6.08□□□□□ -1.44
CDH8-202ENST00000577228 TAX1BP3O14907 124 aa6.06□□□□□ -1.44
CDH8-202ENST00000577228 COX6CP09669 75 aa6.06□□□□□ -1.44
CDH8-202ENST00000577228 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.06□□□□□ -1.44
CDH8-202ENST00000577228 Q96NJ1 140 aa6.06□□□□□ -1.44
CDH8-202ENST00000577228 KRTAP9-8Q9BYQ0 159 aa6.06□□□□□ -1.44
CDH8-202ENST00000577228 LST1O00453 97 aa6.05□□□□□ -1.44
CDH8-202ENST00000577228 SCGB1C2P0DMR2 95 aa6.05□□□□□ -1.44
CDH8-202ENST00000577228 A0A1B0GX51 115 aa6.04□□□□□ -1.44
CDH8-202ENST00000577228 C9orf118A6NHY6 69 aa6.03□□□□□ -1.44
CDH8-202ENST00000577228 H3BUT2 72 aa6.03□□□□□ -1.44
CDH8-202ENST00000577228 TRBV20-1A0A075B6N2 111 aa6.02□□□□□ -1.45
CDH8-202ENST00000577228 PPDPFLQ8WWR9 84 aa6.02□□□□□ -1.45
CDH8-202ENST00000577228 C20orf166-AS1Q96NR2 134 aa6.02□□□□□ -1.45
CDH8-202ENST00000577228 USH2AO75445 5202 aa6.02□□□□□ -1.45
CDH8-202ENST00000577228 SNCGO76070 127 aa6.01□□□□□ -1.45
CDH8-202ENST00000577228 COL5A1-AS1Q5SY13 56 aa6.01□□□□□ -1.45
CDH8-202ENST00000577228 SSPOA2VEC9 5147 aa6.01□□□□□ -1.45
CDH8-202ENST00000577228 A8MUU9 505 aa6□□□□□ -1.45
CDH8-202ENST00000577228 TRACP01848 142 aa6□□□□□ -1.45
CDH8-202ENST00000577228 SS18L2Q9UHA2 77 aa6□□□□□ -1.45
CDH8-202ENST00000577228 A0A1W2PPM0 123 aa5.99□□□□□ -1.45
CDH8-202ENST00000577228 DNAL4O96015 105 aa5.99□□□□□ -1.45
CDH8-202ENST00000577228 ATXN8Q156A1 80 aa5.98□□□□□ -1.45
CDH8-202ENST00000577228 ORMDL1Q9P0S3 153 aa5.98□□□□□ -1.45
CDH8-202ENST00000577228 LYRM7Q5U5X0 104 aa5.97□□□□□ -1.45
CDH8-202ENST00000577228 MT2AP02795 61 aa5.96□□□□□ -1.46
CDH8-202ENST00000577228 FABP2P12104 132 aa5.96□□□□□ -1.46
CDH8-202ENST00000577228 NDUFV3P56181 108 aaKnown RBP5.96□□□□□ -1.46
CDH8-202ENST00000577228 FAM236DA0A1B0GTK5 79 aa5.95□□□□□ -1.46
CDH8-202ENST00000577228 FAM236CP0DP71 79 aa5.95□□□□□ -1.46
CDH8-202ENST00000577228 A0A087WSZ3 146 aa5.94□□□□□ -1.46
CDH8-202ENST00000577228 DSCR10P59022 87 aa5.94□□□□□ -1.46
CDH8-202ENST00000577228 TEN1Q86WV5 123 aa5.94□□□□□ -1.46
CDH8-202ENST00000577228 FCGBPQ9Y6R7 5405 aaPredicted RBP5.94□□□□□ -1.46
CDH8-202ENST00000577228 TMEM256-PLSCR3K7ERE1 68 aa5.93□□□□□ -1.46
CDH8-202ENST00000577228 GHRHP01286 108 aa5.93□□□□□ -1.46
CDH8-202ENST00000577228 BAALC-AS2P0C853 105 aa5.93□□□□□ -1.46
CDH8-202ENST00000577228 A0A1B0GV72 72 aa5.92□□□□□ -1.46
CDH8-202ENST00000577228 C9JAW5 83 aa5.92□□□□□ -1.46
CDH8-202ENST00000577228 H3BMG7 143 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms