RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.21□□□□□ -0.29
SNF8-217ENST00000576353 F8WEM9 126 aa13.2□□□□□ -0.3
SNF8-217ENST00000576353 H0YGX0 51 aa13.18□□□□□ -0.3
SNF8-217ENST00000576353 SNCGO76070 127 aa13.18□□□□□ -0.3
SNF8-217ENST00000576353 KRTAP13-3Q3SY46 172 aa13.18□□□□□ -0.3
SNF8-217ENST00000576353 PRO1854Q9UHT4 67 aa13.18□□□□□ -0.3
SNF8-217ENST00000576353 FXYD2P54710 66 aa13.16□□□□□ -0.3
SNF8-217ENST00000576353 HSD52Q0P140 79 aa13.16□□□□□ -0.3
SNF8-217ENST00000576353 PPDPFLQ8WWR9 84 aa13.15□□□□□ -0.3
SNF8-217ENST00000576353 UQCR10Q9UDW1 63 aa13.14□□□□□ -0.31
SNF8-217ENST00000576353 Q5XG85 94 aa13.11□□□□□ -0.31
SNF8-217ENST00000576353 A0A0G2JQZ4 141 aa13.1□□□□□ -0.31
SNF8-217ENST00000576353 OCIAD2Q56VL3 154 aa13.1□□□□□ -0.31
SNF8-217ENST00000576353 Q6JHZ5 121 aa13.1□□□□□ -0.31
SNF8-217ENST00000576353 SNHG12Q9BXW3 62 aa13.1□□□□□ -0.31
SNF8-217ENST00000576353 IGLV8-61A0A075B6I0 122 aa13.08□□□□□ -0.32
SNF8-217ENST00000576353 FAM218AQ96MZ4 157 aa13.06□□□□□ -0.32
SNF8-217ENST00000576353 A0A1B0GX51 115 aa13.05□□□□□ -0.32
SNF8-217ENST00000576353 GHRHP01286 108 aa13.03□□□□□ -0.32
SNF8-217ENST00000576353 CLEC2BQ92478 149 aa13.03□□□□□ -0.32
SNF8-217ENST00000576353 TRIAP1O43715 76 aa13.02□□□□□ -0.33
SNF8-217ENST00000576353 TCL1BO95988 128 aa13.02□□□□□ -0.33
SNF8-217ENST00000576353 IGFL1Q6UW32 110 aa13.01□□□□□ -0.33
SNF8-217ENST00000576353 K7ERJ3 54 aa13□□□□□ -0.33
SNF8-217ENST00000576353 PSMB2P49721 201 aa12.99□□□□□ -0.33
SNF8-217ENST00000576353 C1orf195Q5TG92 126 aa12.99□□□□□ -0.33
SNF8-217ENST00000576353 A0A0U1RQV1 116 aa12.97□□□□□ -0.33
SNF8-217ENST00000576353 COX6CP09669 75 aa12.97□□□□□ -0.33
SNF8-217ENST00000576353 ASB16-AS1Q495Z4 193 aa12.96□□□□□ -0.33
SNF8-217ENST00000576353 TRBV7-7A0A0K0K1E9 115 aa12.95□□□□□ -0.34
SNF8-217ENST00000576353 H3BUT2 72 aa12.95□□□□□ -0.34
SNF8-217ENST00000576353 NDUFV3P56181 108 aaKnown RBP12.95□□□□□ -0.34
SNF8-217ENST00000576353 SEC61BP60468 96 aaKnown RBP12.95□□□□□ -0.34
SNF8-217ENST00000576353 XP32Q5T750 250 aa12.95□□□□□ -0.34
SNF8-217ENST00000576353 MUC2Q02817 5179 aa12.94□□□□□ -0.34
SNF8-217ENST00000576353 FABP2P12104 132 aa12.92□□□□□ -0.34
SNF8-217ENST00000576353 DNAL4O96015 105 aa12.91□□□□□ -0.34
SNF8-217ENST00000576353 SMIM6P0DI80 62 aa12.9□□□□□ -0.34
SNF8-217ENST00000576353 H3BQ85 93 aa12.89□□□□□ -0.35
SNF8-217ENST00000576353 C9orf92A6NGG3 77 aa12.88□□□□□ -0.35
SNF8-217ENST00000576353 H3BMG7 143 aa12.87□□□□□ -0.35
SNF8-217ENST00000576353 ORMDL1Q9P0S3 153 aa12.87□□□□□ -0.35
SNF8-217ENST00000576353 Q6Q795 121 aa12.85□□□□□ -0.35
SNF8-217ENST00000576353 MUC17Q685J3 4493 aa12.84□□□□□ -0.35
SNF8-217ENST00000576353 M0R143 59 aa12.83□□□□□ -0.36
SNF8-217ENST00000576353 SCGB1C2P0DMR2 95 aa12.83□□□□□ -0.36
SNF8-217ENST00000576353 TEN1Q86WV5 123 aa12.83□□□□□ -0.36
SNF8-217ENST00000576353 TMEM256-PLSCR3K7ERE1 68 aa12.81□□□□□ -0.36
SNF8-217ENST00000576353 SS18L2Q9UHA2 77 aa12.8□□□□□ -0.36
SNF8-217ENST00000576353 LST1O00453 97 aa12.78□□□□□ -0.36
SNF8-217ENST00000576353 TRACP01848 142 aa12.78□□□□□ -0.36
SNF8-217ENST00000576353 ANKRD29Q8N6D5 301 aa12.74□□□□□ -0.37
SNF8-217ENST00000576353 TSTD3H0UI37 97 aa12.73□□□□□ -0.37
SNF8-217ENST00000576353 A0A087WSZ3 146 aa12.72□□□□□ -0.37
SNF8-217ENST00000576353 UBE2V1Q13404 147 aa12.72□□□□□ -0.37
SNF8-217ENST00000576353 KRTAP4-1Q9BYQ7 146 aa12.71□□□□□ -0.37
SNF8-217ENST00000576353 PCOTHQ58A44 107 aa12.7□□□□□ -0.38
SNF8-217ENST00000576353 LOC105371267A0A1B0GV96 52 aa12.69□□□□□ -0.38
SNF8-217ENST00000576353 A0A1W2PNM2 257 aa12.69□□□□□ -0.38
SNF8-217ENST00000576353 A0A1B0GV72 72 aa12.68□□□□□ -0.38
SNF8-217ENST00000576353 TRBV7-4A0A0J9YYF1 115 aa12.66□□□□□ -0.38
SNF8-217ENST00000576353 RPL37P61927 97 aaKnown RBP12.65□□□□□ -0.38
SNF8-217ENST00000576353 BAALC-AS2P0C853 105 aa12.63□□□□□ -0.39
SNF8-217ENST00000576353 ATXN8Q156A1 80 aa12.62□□□□□ -0.39
SNF8-217ENST00000576353 FAT4Q6V0I7 4981 aa12.61□□□□□ -0.39
SNF8-217ENST00000576353 CCKP06307 115 aa12.61□□□□□ -0.39
SNF8-217ENST00000576353 OBSCN-AS1Q96MR7 158 aa12.61□□□□□ -0.39
SNF8-217ENST00000576353 NAA38Q9BRA0 125 aaKnown RBP12.61□□□□□ -0.39
SNF8-217ENST00000576353 RBM3P98179 157 aaKnown RBP12.6□□□□□ -0.39
SNF8-217ENST00000576353 BATFQ16520 125 aa12.58□□□□□ -0.4
SNF8-217ENST00000576353 LCE2AQ5TA79 106 aaPredicted RBP12.58□□□□□ -0.4
SNF8-217ENST00000576353 Q96NJ1 140 aa12.58□□□□□ -0.4
SNF8-217ENST00000576353 DSCR8Q96T75 97 aa12.58□□□□□ -0.4
SNF8-217ENST00000576353 LYRM7Q5U5X0 104 aa12.56□□□□□ -0.4
SNF8-217ENST00000576353 Q75L30 129 aa12.51□□□□□ -0.41
SNF8-217ENST00000576353 SIGMAR1Q99720 223 aa12.51□□□□□ -0.41
SNF8-217ENST00000576353 VPS25Q9BRG1 176 aa12.51□□□□□ -0.41
SNF8-217ENST00000576353 TRBV20-1A0A075B6N2 111 aa12.5□□□□□ -0.41
SNF8-217ENST00000576353 C9JAW5 83 aa12.5□□□□□ -0.41
SNF8-217ENST00000576353 IGKV4-1P06312 121 aa12.49□□□□□ -0.41
SNF8-217ENST00000576353 JMJD7-PLA2G4BH0Y9G9 81 aa12.48□□□□□ -0.41
SNF8-217ENST00000576353 ATP11AUNQ6ZP68 121 aa12.48□□□□□ -0.41
SNF8-217ENST00000576353 C21orf62-AS1Q17RA5 79 aa12.47□□□□□ -0.41
SNF8-217ENST00000576353 LINC00472Q9H8W2 130 aa12.46□□□□□ -0.41
SNF8-217ENST00000576353 C9orf118A6NHY6 69 aa12.43□□□□□ -0.42
SNF8-217ENST00000576353 C20orf166-AS1Q96NR2 134 aa12.42□□□□□ -0.42
SNF8-217ENST00000576353 DSCR10P59022 87 aa12.41□□□□□ -0.42
SNF8-217ENST00000576353 DEFB116Q30KQ4 102 aa12.41□□□□□ -0.42
SNF8-217ENST00000576353 LINC00313P59037 77 aa12.4□□□□□ -0.42
SNF8-217ENST00000576353 TAX1BP3O14907 124 aa12.39□□□□□ -0.43
SNF8-217ENST00000576353 PDE6GP18545 87 aa12.39□□□□□ -0.43
SNF8-217ENST00000576353 LOC110117498A0A087WWA1 95 aa12.38□□□□□ -0.43
SNF8-217ENST00000576353 A8MUU9 505 aa12.38□□□□□ -0.43
SNF8-217ENST00000576353 Q6ZQT0 140 aa12.37□□□□□ -0.43
SNF8-217ENST00000576353 A0A1B0GW54 56 aa12.36□□□□□ -0.43
SNF8-217ENST00000576353 A0A1W2PPM0 123 aa12.36□□□□□ -0.43
SNF8-217ENST00000576353 LCE2CQ5TA81 110 aa12.36□□□□□ -0.43
SNF8-217ENST00000576353 KRTAP19-2Q3LHN2 52 aa12.35□□□□□ -0.43
SNF8-217ENST00000576353 IGHV6-1A0A0B4J1U7 121 aa12.32□□□□□ -0.44
SNF8-217ENST00000576353 J3KT08 172 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms