RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 LINC01547P58512 204 aaPredicted RBP8.21□□□□□ -1.1
RPAIN-217ENST00000575711 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.21□□□□□ -1.1
RPAIN-217ENST00000575711 FAM218AQ96MZ4 157 aa8.21□□□□□ -1.1
RPAIN-217ENST00000575711 LAMTOR3Q9UHA4 124 aa8.21□□□□□ -1.1
RPAIN-217ENST00000575711 DMBT1Q9UGM3 2413 aaPredicted RBP8.21□□□□□ -1.1
RPAIN-217ENST00000575711 SCGB1C2P0DMR2 95 aa8.19□□□□□ -1.1
RPAIN-217ENST00000575711 MOBPQ13875 183 aa8.19□□□□□ -1.1
RPAIN-217ENST00000575711 C9orf153Q5TBE3 101 aa8.19□□□□□ -1.1
RPAIN-217ENST00000575711 Q8N377 158 aa8.19□□□□□ -1.1
RPAIN-217ENST00000575711 CLEC2BQ92478 149 aa8.19□□□□□ -1.1
RPAIN-217ENST00000575711 OCIAD2Q56VL3 154 aa8.17□□□□□ -1.1
RPAIN-217ENST00000575711 SSBP3-AS1Q7Z2R9 100 aa8.17□□□□□ -1.1
RPAIN-217ENST00000575711 LINC00304Q8N9R0 145 aa8.17□□□□□ -1.1
RPAIN-217ENST00000575711 Q8NBF4 154 aa8.17□□□□□ -1.1
RPAIN-217ENST00000575711 DNAL4O96015 105 aa8.16□□□□□ -1.1
RPAIN-217ENST00000575711 SMIM29Q86T20 159 aa8.16□□□□□ -1.1
RPAIN-217ENST00000575711 PPDPFLQ8WWR9 84 aa8.16□□□□□ -1.1
RPAIN-217ENST00000575711 GHRHP01286 108 aa8.15□□□□□ -1.1
RPAIN-217ENST00000575711 PCP4L1A6NKN8 68 aa8.14□□□□□ -1.11
RPAIN-217ENST00000575711 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.14□□□□□ -1.11
RPAIN-217ENST00000575711 NAA38Q9BRA0 125 aaKnown RBP8.14□□□□□ -1.11
RPAIN-217ENST00000575711 F8WEM9 126 aa8.13□□□□□ -1.11
RPAIN-217ENST00000575711 SPAG11AQ6PDA7 123 aa8.13□□□□□ -1.11
RPAIN-217ENST00000575711 SNHG12Q9BXW3 62 aa8.13□□□□□ -1.11
RPAIN-217ENST00000575711 KRTAP9-2Q9BYQ4 174 aa8.13□□□□□ -1.11
RPAIN-217ENST00000575711 HERC1Q15751 4861 aa8.13□□□□□ -1.11
RPAIN-217ENST00000575711 LST1O00453 97 aa8.12□□□□□ -1.11
RPAIN-217ENST00000575711 LYRM7Q5U5X0 104 aa8.12□□□□□ -1.11
RPAIN-217ENST00000575711 TRACP01848 142 aa8.11□□□□□ -1.11
RPAIN-217ENST00000575711 ORMDL1Q9P0S3 153 aa8.11□□□□□ -1.11
RPAIN-217ENST00000575711 C9orf118A6NHY6 69 aa8.1□□□□□ -1.11
RPAIN-217ENST00000575711 H3BUT2 72 aa8.1□□□□□ -1.11
RPAIN-217ENST00000575711 TAX1BP3O14907 124 aa8.1□□□□□ -1.11
RPAIN-217ENST00000575711 H3BQ85 93 aa8.09□□□□□ -1.11
RPAIN-217ENST00000575711 FABP2P12104 132 aa8.09□□□□□ -1.11
RPAIN-217ENST00000575711 ATXN8Q156A1 80 aa8.09□□□□□ -1.11
RPAIN-217ENST00000575711 KRTAP9-6A0A140TA67 174 aa8.08□□□□□ -1.12
RPAIN-217ENST00000575711 SPINK1P00995 79 aa8.08□□□□□ -1.12
RPAIN-217ENST00000575711 COL5A1-AS1Q5SY13 56 aa8.08□□□□□ -1.12
RPAIN-217ENST00000575711 TCL1BO95988 128 aa8.07□□□□□ -1.12
RPAIN-217ENST00000575711 TMEM256-PLSCR3K7ERE1 68 aa8.06□□□□□ -1.12
RPAIN-217ENST00000575711 NDUFV3P56181 108 aaKnown RBP8.06□□□□□ -1.12
RPAIN-217ENST00000575711 IGLV8-61A0A075B6I0 122 aa8.05□□□□□ -1.12
RPAIN-217ENST00000575711 TRBV20-1A0A075B6N2 111 aa8.05□□□□□ -1.12
RPAIN-217ENST00000575711 Q6JHZ5 121 aa8.05□□□□□ -1.12
RPAIN-217ENST00000575711 A0A1W2PPM0 123 aa8.04□□□□□ -1.12
RPAIN-217ENST00000575711 RPS29P62273 56 aaKnown RBP8.04□□□□□ -1.12
RPAIN-217ENST00000575711 HRCT1Q6UXD1 115 aa8.04□□□□□ -1.12
RPAIN-217ENST00000575711 CD164Q04900 197 aa8.03□□□□□ -1.12
RPAIN-217ENST00000575711 A0A0G2JQZ4 141 aa8.02□□□□□ -1.13
RPAIN-217ENST00000575711 H3BMG7 143 aa8.01□□□□□ -1.13
RPAIN-217ENST00000575711 UBE2V1Q13404 147 aa8.01□□□□□ -1.13
RPAIN-217ENST00000575711 IGFL1Q6UW32 110 aa8.01□□□□□ -1.13
RPAIN-217ENST00000575711 BAALC-AS2P0C853 105 aa8□□□□□ -1.13
RPAIN-217ENST00000575711 LIMD2Q9BT23 127 aa8□□□□□ -1.13
RPAIN-217ENST00000575711 PRR4Q16378 134 aa7.99□□□□□ -1.13
RPAIN-217ENST00000575711 RETNLBQ9BQ08 111 aa7.98□□□□□ -1.13
RPAIN-217ENST00000575711 A0A1B0GV72 72 aa7.97□□□□□ -1.13
RPAIN-217ENST00000575711 C9JAW5 83 aa7.97□□□□□ -1.13
RPAIN-217ENST00000575711 ANKRD29Q8N6D5 301 aa7.97□□□□□ -1.13
RPAIN-217ENST00000575711 SPCS1Q9Y6A9 102 aa7.97□□□□□ -1.13
RPAIN-217ENST00000575711 HMCN2Q8NDA2 5059 aa7.96□□□□□ -1.14
RPAIN-217ENST00000575711 TRBV7-7A0A0K0K1E9 115 aa7.93□□□□□ -1.14
RPAIN-217ENST00000575711 RBM3P98179 157 aaKnown RBP7.93□□□□□ -1.14
RPAIN-217ENST00000575711 Q5XG85 94 aa7.93□□□□□ -1.14
RPAIN-217ENST00000575711 TEN1Q86WV5 123 aa7.93□□□□□ -1.14
RPAIN-217ENST00000575711 Q6Q795 121 aa7.92□□□□□ -1.14
RPAIN-217ENST00000575711 FP248Q71RG6 208 aaPredicted RBP7.92□□□□□ -1.14
RPAIN-217ENST00000575711 DSCR8Q96T75 97 aa7.91□□□□□ -1.14
RPAIN-217ENST00000575711 IGLV7-46A0A075B6I9 117 aa7.9□□□□□ -1.14
RPAIN-217ENST00000575711 JMJD7-PLA2G4BH0Y9G9 81 aa7.9□□□□□ -1.14
RPAIN-217ENST00000575711 H3BT86 120 aa7.9□□□□□ -1.14
RPAIN-217ENST00000575711 K7EP34 96 aa7.9□□□□□ -1.14
RPAIN-217ENST00000575711 MTURNQ8N3F0 131 aa7.9□□□□□ -1.14
RPAIN-217ENST00000575711 TRBV7-4A0A0J9YYF1 115 aa7.89□□□□□ -1.15
RPAIN-217ENST00000575711 A0A1W2PNM2 257 aa7.88□□□□□ -1.15
RPAIN-217ENST00000575711 CCKP06307 115 aa7.87□□□□□ -1.15
RPAIN-217ENST00000575711 GTF2H5Q6ZYL4 71 aa7.87□□□□□ -1.15
RPAIN-217ENST00000575711 SS18L2Q9UHA2 77 aa7.87□□□□□ -1.15
RPAIN-217ENST00000575711 A0A087WSZ3 146 aa7.86□□□□□ -1.15
RPAIN-217ENST00000575711 ASB16-AS1Q495Z4 193 aa7.86□□□□□ -1.15
RPAIN-217ENST00000575711 LCE3BQ5TA77 95 aa7.85□□□□□ -1.15
RPAIN-217ENST00000575711 C1orf195Q5TG92 126 aa7.85□□□□□ -1.15
RPAIN-217ENST00000575711 VPS25Q9BRG1 176 aa7.85□□□□□ -1.15
RPAIN-217ENST00000575711 KRTAP4-12Q9BQ66 201 aa7.84□□□□□ -1.15
RPAIN-217ENST00000575711 LOC110117498A0A087WWA1 95 aa7.83□□□□□ -1.16
RPAIN-217ENST00000575711 PDE6GP18545 87 aa7.83□□□□□ -1.16
RPAIN-217ENST00000575711 TPRXLQ17RH7 258 aa7.83□□□□□ -1.16
RPAIN-217ENST00000575711 OBSCN-AS1Q96MR7 158 aa7.83□□□□□ -1.16
RPAIN-217ENST00000575711 C14orf132Q9NPU4 83 aa7.82□□□□□ -1.16
RPAIN-217ENST00000575711 Q6ZQT0 140 aa7.81□□□□□ -1.16
RPAIN-217ENST00000575711 PRO0461Q9UI25 63 aa7.8□□□□□ -1.16
RPAIN-217ENST00000575711 LPAP08519 4548 aa7.79□□□□□ -1.16
RPAIN-217ENST00000575711 C21orf62-AS1Q17RA5 79 aa7.79□□□□□ -1.16
RPAIN-217ENST00000575711 KRTAP13-3Q3SY46 172 aa7.78□□□□□ -1.16
RPAIN-217ENST00000575711 CDIP1Q9H305 208 aa7.78□□□□□ -1.16
RPAIN-217ENST00000575711 LRP2P98164 4655 aa7.77□□□□□ -1.17
RPAIN-217ENST00000575711 A0A1B0GW54 56 aa7.76□□□□□ -1.17
RPAIN-217ENST00000575711 F8W1H4 67 aa7.76□□□□□ -1.17
RPAIN-217ENST00000575711 Q96NJ1 140 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms