RNA–Protein interactions for RNA: ENST00000573521.1

PCDHGA9-201, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA9, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-201ENST00000573521 A0A087WTM6 91 aa7.95□□□□□ -1.14
PCDHGA9-201ENST00000573521 SPRR1AP35321 89 aa7.94□□□□□ -1.14
PCDHGA9-201ENST00000573521 COL12A1Q99715 3063 aa7.94□□□□□ -1.14
PCDHGA9-201ENST00000573521 PLA2G1BP04054 148 aaKnown RBP7.93□□□□□ -1.14
PCDHGA9-201ENST00000573521 IGLV8-61A0A075B6I0 122 aa7.93□□□□□ -1.14
PCDHGA9-201ENST00000573521 IGLV7-43P04211 117 aa7.93□□□□□ -1.14
PCDHGA9-201ENST00000573521 K7EIL1 84 aa7.93□□□□□ -1.14
PCDHGA9-201ENST00000573521 KRTAP10-11P60412 298 aa7.93□□□□□ -1.14
PCDHGA9-201ENST00000573521 KRTAP1-3Q8IUG1 177 aa7.93□□□□□ -1.14
PCDHGA9-201ENST00000573521 HRNRQ86YZ3 2850 aaPredicted RBP7.92□□□□□ -1.14
PCDHGA9-201ENST00000573521 F8P00451 2351 aa7.92□□□□□ -1.14
PCDHGA9-201ENST00000573521 DSCR10P59022 87 aa7.91□□□□□ -1.14
PCDHGA9-201ENST00000573521 ACANP16112 2415 aa7.91□□□□□ -1.14
PCDHGA9-201ENST00000573521 SPRR1BP22528 89 aa7.91□□□□□ -1.14
PCDHGA9-201ENST00000573521 FLNBO75369 2602 aaKnown RBP7.91□□□□□ -1.14
PCDHGA9-201ENST00000573521 Q75L30 129 aa7.91□□□□□ -1.14
PCDHGA9-201ENST00000573521 SVEP1Q4LDE5 3571 aa7.9□□□□□ -1.14
PCDHGA9-201ENST00000573521 LINC00304Q8N9R0 145 aa7.9□□□□□ -1.14
PCDHGA9-201ENST00000573521 KRTAP10-3P60369 221 aa7.9□□□□□ -1.15
PCDHGA9-201ENST00000573521 APLNQ9ULZ1 77 aa7.89□□□□□ -1.15
PCDHGA9-201ENST00000573521 A0A1W2PNN7 141 aa7.88□□□□□ -1.15
PCDHGA9-201ENST00000573521 KRTAP1-1Q07627 177 aa7.88□□□□□ -1.15
PCDHGA9-201ENST00000573521 HECTD1Q9ULT8 2610 aa7.87□□□□□ -1.15
PCDHGA9-201ENST00000573521 USP24Q9UPU5 2620 aa7.87□□□□□ -1.15
PCDHGA9-201ENST00000573521 FAM229BQ4G0N7 80 aa7.86□□□□□ -1.15
PCDHGA9-201ENST00000573521 LINC01558Q9Y6Z2 57 aa7.86□□□□□ -1.15
PCDHGA9-201ENST00000573521 CENPEQ02224 2701 aa7.85□□□□□ -1.15
PCDHGA9-201ENST00000573521 PSORS1C2Q9UIG4 136 aa7.85□□□□□ -1.15
PCDHGA9-201ENST00000573521 HELZ2Q9BYK8 2649 aaKnown RBP7.85□□□□□ -1.15
PCDHGA9-201ENST00000573521 CRIPTQ9P021 101 aa7.85□□□□□ -1.15
PCDHGA9-201ENST00000573521 Q5XG85 94 aa7.82□□□□□ -1.16
PCDHGA9-201ENST00000573521 SPINT4Q6UDR6 99 aa7.8□□□□□ -1.16
PCDHGA9-201ENST00000573521 FLNCQ14315 2725 aa7.79□□□□□ -1.16
PCDHGA9-201ENST00000573521 ITPR1Q14643 2758 aa7.79□□□□□ -1.16
PCDHGA9-201ENST00000573521 Q8N9P0 234 aaPredicted RBP7.78□□□□□ -1.16
PCDHGA9-201ENST00000573521 CELSR1Q9NYQ6 3014 aa7.77□□□□□ -1.17
PCDHGA9-201ENST00000573521 MMP24-AS1A0A0U1RRL7 71 aa7.77□□□□□ -1.17
PCDHGA9-201ENST00000573521 CFAP46Q8IYW2 2715 aa7.75□□□□□ -1.17
PCDHGA9-201ENST00000573521 ASB16-AS1Q495Z4 193 aa7.75□□□□□ -1.17
PCDHGA9-201ENST00000573521 IGSF10Q6WRI0 2623 aa7.75□□□□□ -1.17
PCDHGA9-201ENST00000573521 CRYBG3Q68DQ2 2970 aa7.74□□□□□ -1.17
PCDHGA9-201ENST00000573521 FP248Q71RG6 208 aaPredicted RBP7.74□□□□□ -1.17
PCDHGA9-201ENST00000573521 LINC00472Q9H8W2 130 aa7.74□□□□□ -1.17
PCDHGA9-201ENST00000573521 CASC10Q5T4H9 136 aa7.74□□□□□ -1.17
PCDHGA9-201ENST00000573521 UTP20O75691 2785 aaKnown RBP7.73□□□□□ -1.17
PCDHGA9-201ENST00000573521 PLAC8Q9NZF1 115 aa7.72□□□□□ -1.17
PCDHGA9-201ENST00000573521 TNP2Q05952 138 aa7.71□□□□□ -1.18
PCDHGA9-201ENST00000573521 RBM12B-AS1Q9P1G2 102 aa7.69□□□□□ -1.18
PCDHGA9-201ENST00000573521 A0A0G2JQZ4 141 aa7.69□□□□□ -1.18
PCDHGA9-201ENST00000573521 HRES1P13985 223 aa7.68□□□□□ -1.18
PCDHGA9-201ENST00000573521 KRTAP26-1Q6PEX3 210 aa7.67□□□□□ -1.18
PCDHGA9-201ENST00000573521 PRR26Q8N8Z3 221 aa7.67□□□□□ -1.18
PCDHGA9-201ENST00000573521 FLNAP21333 2647 aaKnown RBP7.67□□□□□ -1.18
PCDHGA9-201ENST00000573521 ITPR3Q14573 2671 aa7.66□□□□□ -1.18
PCDHGA9-201ENST00000573521 Q8NDZ9 215 aa7.66□□□□□ -1.18
PCDHGA9-201ENST00000573521 ZANQ9Y493 2812 aa7.66□□□□□ -1.18
PCDHGA9-201ENST00000573521 CR1P17927 2039 aa7.64□□□□□ -1.19
PCDHGA9-201ENST00000573521 Q5VV11 94 aa7.64□□□□□ -1.19
PCDHGA9-201ENST00000573521 A0A1B0GU33 70 aa7.63□□□□□ -1.19
PCDHGA9-201ENST00000573521 CELSR2Q9HCU4 2923 aa7.63□□□□□ -1.19
PCDHGA9-201ENST00000573521 DMAC1Q96GE9 116 aa7.61□□□□□ -1.19
PCDHGA9-201ENST00000573521 VPS13CQ709C8 3753 aa7.61□□□□□ -1.19
PCDHGA9-201ENST00000573521 CYSTM1Q9H1C7 97 aa7.61□□□□□ -1.19
PCDHGA9-201ENST00000573521 ZCCHC13Q8WW36 166 aaKnown RBP7.61□□□□□ -1.19
PCDHGA9-201ENST00000573521 TEX15Q9BXT5 2789 aa7.61□□□□□ -1.19
PCDHGA9-201ENST00000573521 LINC00483Q53H64 154 aa7.61□□□□□ -1.19
PCDHGA9-201ENST00000573521 ZFHX3Q15911 3703 aa7.6□□□□□ -1.19
PCDHGA9-201ENST00000573521 Q6ZR54 194 aa7.6□□□□□ -1.19
PCDHGA9-201ENST00000573521 KRTAP4-16G5E9R7 235 aaPredicted RBP7.59□□□□□ -1.19
PCDHGA9-201ENST00000573521 LINC01554Q52M75 96 aa7.59□□□□□ -1.19
PCDHGA9-201ENST00000573521 CSMD2Q7Z408 3487 aa7.59□□□□□ -1.19
PCDHGA9-201ENST00000573521 ANAPC11Q9NYG5 84 aa7.59□□□□□ -1.19
PCDHGA9-201ENST00000573521 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.56□□□□□ -1.2
PCDHGA9-201ENST00000573521 KRTAP29-1A8MX34 341 aaPredicted RBP7.56□□□□□ -1.2
PCDHGA9-201ENST00000573521 UNC79Q9P2D8 2635 aa7.55□□□□□ -1.2
PCDHGA9-201ENST00000573521 Q5W150 140 aa7.55□□□□□ -1.2
PCDHGA9-201ENST00000573521 Q8N1X5 172 aa7.55□□□□□ -1.2
PCDHGA9-201ENST00000573521 LCE6AA0A183 80 aa7.54□□□□□ -1.2
PCDHGA9-201ENST00000573521 C9orf92A6NGG3 77 aa7.54□□□□□ -1.2
PCDHGA9-201ENST00000573521 FBN2P35556 2912 aa7.53□□□□□ -1.2
PCDHGA9-201ENST00000573521 CHD6Q8TD26 2715 aa7.53□□□□□ -1.2
PCDHGA9-201ENST00000573521 MXRA5Q9NR99 2828 aa7.51□□□□□ -1.21
PCDHGA9-201ENST00000573521 OXTP01178 125 aa7.51□□□□□ -1.21
PCDHGA9-201ENST00000573521 LUZP6Q538Z0 58 aa7.49□□□□□ -1.21
PCDHGA9-201ENST00000573521 ATRQ13535 2644 aa7.48□□□□□ -1.21
PCDHGA9-201ENST00000573521 BAHCC1Q9P281 2608 aa7.47□□□□□ -1.21
PCDHGA9-201ENST00000573521 J3QL48 77 aa7.47□□□□□ -1.21
PCDHGA9-201ENST00000573521 COX6B2Q6YFQ2 88 aa7.47□□□□□ -1.21
PCDHGA9-201ENST00000573521 A0A087X002 238 aa7.47□□□□□ -1.21
PCDHGA9-201ENST00000573521 APCP25054 2843 aa7.45□□□□□ -1.22
PCDHGA9-201ENST00000573521 NF1P21359 2839 aa7.45□□□□□ -1.22
PCDHGA9-201ENST00000573521 CUBNO60494 3623 aa7.44□□□□□ -1.22
PCDHGA9-201ENST00000573521 CSAG1Q6PB30 78 aa7.43□□□□□ -1.22
PCDHGA9-201ENST00000573521 RPS29P62273 56 aaKnown RBP7.42□□□□□ -1.22
PCDHGA9-201ENST00000573521 SPINK7P58062 85 aa7.41□□□□□ -1.22
PCDHGA9-201ENST00000573521 Q6ZSA8 131 aa7.41□□□□□ -1.22
PCDHGA9-201ENST00000573521 UBR5O95071 2799 aaPredicted RBP7.41□□□□□ -1.22
PCDHGA9-201ENST00000573521 MAST4O15021 2626 aa7.39□□□□□ -1.23
PCDHGA9-201ENST00000573521 SPATA8Q6RVD6 105 aa7.38□□□□□ -1.23
PCDHGA9-201ENST00000573521 A0A0D9SG42 100 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms