RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 SMIM11BQ8TCY0 68 aa5.81□□□□□ -1.48
GTF3C1-213ENST00000571886 COPS9Q8WXC6 57 aa5.81□□□□□ -1.48
GTF3C1-213ENST00000571886 NAA38Q9BRA0 125 aaKnown RBP5.81□□□□□ -1.48
GTF3C1-213ENST00000571886 PRO1854Q9UHT4 67 aa5.81□□□□□ -1.48
GTF3C1-213ENST00000571886 MUC2Q02817 5179 aa5.8□□□□□ -1.48
GTF3C1-213ENST00000571886 IGLV7-46A0A075B6I9 117 aa5.8□□□□□ -1.48
GTF3C1-213ENST00000571886 A0A0B4J2C4 111 aa5.8□□□□□ -1.48
GTF3C1-213ENST00000571886 A4D1N5 150 aa5.8□□□□□ -1.48
GTF3C1-213ENST00000571886 DHRS4-AS1Q9P1J3 65 aa5.8□□□□□ -1.48
GTF3C1-213ENST00000571886 SPINK1P00995 79 aa5.79□□□□□ -1.48
GTF3C1-213ENST00000571886 C9orf153Q5TBE3 101 aa5.79□□□□□ -1.48
GTF3C1-213ENST00000571886 DEFB105AQ8NG35 78 aa5.79□□□□□ -1.48
GTF3C1-213ENST00000571886 TRAV13-2A0A0B4J235 113 aa5.78□□□□□ -1.48
GTF3C1-213ENST00000571886 TRBV7-6A0A0J9YX20 115 aa5.78□□□□□ -1.48
GTF3C1-213ENST00000571886 J3QR89 54 aa5.78□□□□□ -1.48
GTF3C1-213ENST00000571886 LINC01547P58512 204 aaPredicted RBP5.78□□□□□ -1.48
GTF3C1-213ENST00000571886 PRO0461Q9UI25 63 aa5.78□□□□□ -1.48
GTF3C1-213ENST00000571886 SMIM29Q86T20 159 aa5.77□□□□□ -1.49
GTF3C1-213ENST00000571886 Q8N377 158 aa5.77□□□□□ -1.49
GTF3C1-213ENST00000571886 H3BMG7 143 aa5.76□□□□□ -1.49
GTF3C1-213ENST00000571886 TPRXLQ17RH7 258 aa5.76□□□□□ -1.49
GTF3C1-213ENST00000571886 Q1RN00 199 aa5.76□□□□□ -1.49
GTF3C1-213ENST00000571886 A0A0G2JQZ4 141 aa5.75□□□□□ -1.49
GTF3C1-213ENST00000571886 HRCT1Q6UXD1 115 aa5.75□□□□□ -1.49
GTF3C1-213ENST00000571886 VPS25Q9BRG1 176 aa5.75□□□□□ -1.49
GTF3C1-213ENST00000571886 LAMTOR3Q9UHA4 124 aa5.75□□□□□ -1.49
GTF3C1-213ENST00000571886 IGLV5-48A0A075B6I7 105 aa5.74□□□□□ -1.49
GTF3C1-213ENST00000571886 TEX49A0A1B0GTD5 131 aa5.74□□□□□ -1.49
GTF3C1-213ENST00000571886 SCGB1C2P0DMR2 95 aa5.74□□□□□ -1.49
GTF3C1-213ENST00000571886 RPS29P62273 56 aaKnown RBP5.74□□□□□ -1.49
GTF3C1-213ENST00000571886 FP248Q71RG6 208 aaPredicted RBP5.74□□□□□ -1.49
GTF3C1-213ENST00000571886 PSMB2P49721 201 aa5.73□□□□□ -1.49
GTF3C1-213ENST00000571886 KRTAP13-3Q3SY46 172 aa5.73□□□□□ -1.49
GTF3C1-213ENST00000571886 LINC00575Q6W349 94 aa5.73□□□□□ -1.49
GTF3C1-213ENST00000571886 CDIP1Q9H305 208 aa5.73□□□□□ -1.49
GTF3C1-213ENST00000571886 MUC17Q685J3 4493 aa5.72□□□□□ -1.49
GTF3C1-213ENST00000571886 SLC25A20O43772 301 aa5.71□□□□□ -1.5
GTF3C1-213ENST00000571886 TCL1BO95988 128 aa5.71□□□□□ -1.5
GTF3C1-213ENST00000571886 COX6CP09669 75 aa5.71□□□□□ -1.5
GTF3C1-213ENST00000571886 SMCPP49901 116 aaPredicted RBP5.71□□□□□ -1.5
GTF3C1-213ENST00000571886 ETDBQ3ZM63 59 aa5.71□□□□□ -1.5
GTF3C1-213ENST00000571886 ATXN8Q156A1 80 aa5.7□□□□□ -1.5
GTF3C1-213ENST00000571886 hADV29S1A0JD25 119 aa5.69□□□□□ -1.5
GTF3C1-213ENST00000571886 H7C2G1 150 aa5.69□□□□□ -1.5
GTF3C1-213ENST00000571886 PCP4P48539 62 aa5.69□□□□□ -1.5
GTF3C1-213ENST00000571886 TEN1Q86WV5 123 aa5.69□□□□□ -1.5
GTF3C1-213ENST00000571886 PPDPFLQ8WWR9 84 aa5.69□□□□□ -1.5
GTF3C1-213ENST00000571886 Q6ZQY7 126 aa5.68□□□□□ -1.5
GTF3C1-213ENST00000571886 SIGMAR1Q99720 223 aa5.67□□□□□ -1.5
GTF3C1-213ENST00000571886 TRIAP1O43715 76 aa5.66□□□□□ -1.5
GTF3C1-213ENST00000571886 SCGB1A1P11684 91 aa5.66□□□□□ -1.5
GTF3C1-213ENST00000571886 CD164Q04900 197 aa5.66□□□□□ -1.5
GTF3C1-213ENST00000571886 ANKRD29Q8N6D5 301 aa5.66□□□□□ -1.5
GTF3C1-213ENST00000571886 FAM218AQ96MZ4 157 aa5.65□□□□□ -1.5
GTF3C1-213ENST00000571886 C9JAW5 83 aa5.64□□□□□ -1.51
GTF3C1-213ENST00000571886 H3BT86 120 aa5.64□□□□□ -1.51
GTF3C1-213ENST00000571886 LST1O00453 97 aa5.64□□□□□ -1.51
GTF3C1-213ENST00000571886 LIMD2Q9BT23 127 aa5.64□□□□□ -1.51
GTF3C1-213ENST00000571886 KRTAP4-1Q9BYQ7 146 aa5.64□□□□□ -1.51
GTF3C1-213ENST00000571886 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.63□□□□□ -1.51
GTF3C1-213ENST00000571886 TRACP01848 142 aa5.62□□□□□ -1.51
GTF3C1-213ENST00000571886 ASB16-AS1Q495Z4 193 aa5.62□□□□□ -1.51
GTF3C1-213ENST00000571886 XP32Q5T750 250 aa5.62□□□□□ -1.51
GTF3C1-213ENST00000571886 C1orf195Q5TG92 126 aa5.62□□□□□ -1.51
GTF3C1-213ENST00000571886 Q5XG85 94 aa5.62□□□□□ -1.51
GTF3C1-213ENST00000571886 IGFL1Q6UW32 110 aa5.62□□□□□ -1.51
GTF3C1-213ENST00000571886 FAT4Q6V0I7 4981 aa5.62□□□□□ -1.51
GTF3C1-213ENST00000571886 IGLV8-61A0A075B6I0 122 aa5.61□□□□□ -1.51
GTF3C1-213ENST00000571886 H0YGX0 51 aa5.61□□□□□ -1.51
GTF3C1-213ENST00000571886 MTURNQ8N3F0 131 aa5.61□□□□□ -1.51
GTF3C1-213ENST00000571886 C9orf92A6NGG3 77 aa5.6□□□□□ -1.51
GTF3C1-213ENST00000571886 F8WEM9 126 aa5.6□□□□□ -1.51
GTF3C1-213ENST00000571886 A0A0U1RQV1 116 aa5.59□□□□□ -1.51
GTF3C1-213ENST00000571886 TRBV7-7A0A0K0K1E9 115 aa5.57□□□□□ -1.52
GTF3C1-213ENST00000571886 FAM240AA0A1B0GVK7 77 aa5.57□□□□□ -1.52
GTF3C1-213ENST00000571886 Q6JHZ5 121 aa5.57□□□□□ -1.52
GTF3C1-213ENST00000571886 CLEC2BQ92478 149 aa5.57□□□□□ -1.52
GTF3C1-213ENST00000571886 ACYP1P07311 99 aa5.56□□□□□ -1.52
GTF3C1-213ENST00000571886 SEC61BP60468 96 aaKnown RBP5.56□□□□□ -1.52
GTF3C1-213ENST00000571886 A0A1B0GX51 115 aa5.55□□□□□ -1.52
GTF3C1-213ENST00000571886 BAALC-AS2P0C853 105 aa5.55□□□□□ -1.52
GTF3C1-213ENST00000571886 NDUFV3P56181 108 aaKnown RBP5.55□□□□□ -1.52
GTF3C1-213ENST00000571886 LCE2AQ5TA79 106 aaPredicted RBP5.55□□□□□ -1.52
GTF3C1-213ENST00000571886 PCOTHQ58A44 107 aa5.53□□□□□ -1.52
GTF3C1-213ENST00000571886 Q6Q795 121 aa5.53□□□□□ -1.52
GTF3C1-213ENST00000571886 SNCGO76070 127 aa5.52□□□□□ -1.53
GTF3C1-213ENST00000571886 MT-ATP8P03928 68 aa5.5□□□□□ -1.53
GTF3C1-213ENST00000571886 C21orf62-AS1Q17RA5 79 aa5.5□□□□□ -1.53
GTF3C1-213ENST00000571886 OBSCN-AS1Q96MR7 158 aa5.5□□□□□ -1.53
GTF3C1-213ENST00000571886 A0A1B0GV72 72 aa5.49□□□□□ -1.53
GTF3C1-213ENST00000571886 A0A1W2PNM2 257 aa5.49□□□□□ -1.53
GTF3C1-213ENST00000571886 H3BQ85 93 aa5.49□□□□□ -1.53
GTF3C1-213ENST00000571886 LCE2BO14633 110 aa5.48□□□□□ -1.53
GTF3C1-213ENST00000571886 DNAL4O96015 105 aa5.48□□□□□ -1.53
GTF3C1-213ENST00000571886 IMUPQ9GZP8 106 aa5.48□□□□□ -1.53
GTF3C1-213ENST00000571886 A0A087WSZ3 146 aa5.47□□□□□ -1.53
GTF3C1-213ENST00000571886 RPL37P61927 97 aaKnown RBP5.47□□□□□ -1.53
GTF3C1-213ENST00000571886 KRTAP19-2Q3LHN2 52 aa5.47□□□□□ -1.53
GTF3C1-213ENST00000571886 ORMDL1Q9P0S3 153 aa5.47□□□□□ -1.53
GTF3C1-213ENST00000571886 LCE2CQ5TA81 110 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms