RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 Q5VV11 94 aa2.3□□□□□ -2.04
SMG6-208ENST00000570874 Q8N1X5 172 aa2.3□□□□□ -2.04
SMG6-208ENST00000570874 TMEM254Q8TBM7 123 aa2.3□□□□□ -2.04
SMG6-208ENST00000570874 UBE2D4Q9Y2X8 147 aa2.3□□□□□ -2.04
SMG6-208ENST00000570874 C22orf24Q9Y442 160 aa2.3□□□□□ -2.04
SMG6-208ENST00000570874 DNHD1Q96M86 4753 aa2.3□□□□□ -2.04
SMG6-208ENST00000570874 IGHV3-64A0A075B6Q5 118 aa2.29□□□□□ -2.04
SMG6-208ENST00000570874 A8MUU9 505 aa2.29□□□□□ -2.04
SMG6-208ENST00000570874 COX6A2Q02221 97 aa2.29□□□□□ -2.04
SMG6-208ENST00000570874 MIR22HGQ0VDD5 57 aa2.29□□□□□ -2.04
SMG6-208ENST00000570874 SMIM29Q86T20 159 aa2.29□□□□□ -2.04
SMG6-208ENST00000570874 Q8N377 158 aa2.29□□□□□ -2.04
SMG6-208ENST00000570874 RPL36ALQ969Q0 106 aaKnown RBP2.29□□□□□ -2.04
SMG6-208ENST00000570874 LITAFQ99732 161 aa2.29□□□□□ -2.04
SMG6-208ENST00000570874 ANK2Q01484 3957 aa2.28□□□□□ -2.04
SMG6-208ENST00000570874 IGLV4-60A0A075B6I1 120 aa2.28□□□□□ -2.04
SMG6-208ENST00000570874 TRBV6-8A0A0A6YYG3 113 aa2.28□□□□□ -2.04
SMG6-208ENST00000570874 TRAV10A0A0B4J240 114 aa2.28□□□□□ -2.04
SMG6-208ENST00000570874 TEX49A0A1B0GTD5 131 aa2.28□□□□□ -2.04
SMG6-208ENST00000570874 TRBV6-4A0A1B0GX49 114 aa2.28□□□□□ -2.04
SMG6-208ENST00000570874 SPANXA2-OT1Q8N9U9 137 aa2.28□□□□□ -2.04
SMG6-208ENST00000570874 LINC00308Q8TCZ7 52 aa2.28□□□□□ -2.04
SMG6-208ENST00000570874 IGKV3OR2-268A0A0C4DH90 116 aa2.27□□□□□ -2.05
SMG6-208ENST00000570874 A0A0J9YWU9 116 aa2.27□□□□□ -2.05
SMG6-208ENST00000570874 LOC101927531A0A1B0GV80 90 aa2.27□□□□□ -2.05
SMG6-208ENST00000570874 DNAL4O96015 105 aa2.27□□□□□ -2.05
SMG6-208ENST00000570874 CLPSL2Q6UWE3 100 aa2.27□□□□□ -2.05
SMG6-208ENST00000570874 C20orf166-AS1Q96NR2 134 aa2.27□□□□□ -2.05
SMG6-208ENST00000570874 CDC42SE2Q9NRR3 84 aa2.27□□□□□ -2.05
SMG6-208ENST00000570874 STAB1Q9NY15 2570 aa2.27□□□□□ -2.05
SMG6-208ENST00000570874 DNAH9Q9NYC9 4486 aa2.27□□□□□ -2.05
SMG6-208ENST00000570874 JMJD7-PLA2G4BH0Y9G9 81 aa2.26□□□□□ -2.05
SMG6-208ENST00000570874 IGLV7-43P04211 117 aa2.26□□□□□ -2.05
SMG6-208ENST00000570874 SPART-AS1P0CW21 52 aa2.26□□□□□ -2.05
SMG6-208ENST00000570874 ZNF625Q96I27 306 aaPredicted RBP2.26□□□□□ -2.05
SMG6-208ENST00000570874 CDKN2A-AS1Q9UH64 79 aa2.26□□□□□ -2.05
SMG6-208ENST00000570874 PRO0255Q9UI72 69 aa2.26□□□□□ -2.05
SMG6-208ENST00000570874 NIPBLQ6KC79 2804 aaeCLIP2.26□□□□□ -2.05
SMG6-208ENST00000570874 TENM3Q9P273 2699 aa2.25□□□□□ -2.05
SMG6-208ENST00000570874 PANO1I0J062 215 aa2.25□□□□□ -2.05
SMG6-208ENST00000570874 PSCAO43653 123 aa2.25□□□□□ -2.05
SMG6-208ENST00000570874 PDE6GP18545 87 aa2.25□□□□□ -2.05
SMG6-208ENST00000570874 COX17Q14061 63 aa2.25□□□□□ -2.05
SMG6-208ENST00000570874 KPRPQ5T749 579 aaPredicted RBP2.25□□□□□ -2.05
SMG6-208ENST00000570874 KRTAP5-11Q6L8G4 156 aa2.25□□□□□ -2.05
SMG6-208ENST00000570874 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.25□□□□□ -2.05
SMG6-208ENST00000570874 Q6ZR54 194 aa2.25□□□□□ -2.05
SMG6-208ENST00000570874 OBSCN-AS1Q96MR7 158 aa2.25□□□□□ -2.05
SMG6-208ENST00000570874 A0A1B0GUV1 79 aa2.24□□□□□ -2.05
SMG6-208ENST00000570874 ELOF1P60002 83 aaKnown RBP2.24□□□□□ -2.05
SMG6-208ENST00000570874 KRTAP21-3Q3LHN1 58 aa2.24□□□□□ -2.05
SMG6-208ENST00000570874 WFDC10BQ8IUB3 73 aa2.24□□□□□ -2.05
SMG6-208ENST00000570874 NBEAL2Q6ZNJ1 2754 aa2.24□□□□□ -2.05
SMG6-208ENST00000570874 DEFB131BA0A096LNP1 70 aa2.23□□□□□ -2.05
SMG6-208ENST00000570874 LINC00959A0A1B0GUT2 108 aa2.23□□□□□ -2.05
SMG6-208ENST00000570874 RTL8CO15255 209 aa2.23□□□□□ -2.05
SMG6-208ENST00000570874 ANGP03950 147 aaKnown RBP2.23□□□□□ -2.05
SMG6-208ENST00000570874 COX7B2Q8TF08 81 aa2.23□□□□□ -2.05
SMG6-208ENST00000570874 LINC00167Q96N53 147 aa2.23□□□□□ -2.05
SMG6-208ENST00000570874 ORMDL1Q9P0S3 153 aa2.23□□□□□ -2.05
SMG6-208ENST00000570874 PKD1L1Q8TDX9 2849 aa2.23□□□□□ -2.05
SMG6-208ENST00000570874 A0A1W2PNM2 257 aa2.22□□□□□ -2.05
SMG6-208ENST00000570874 P0C880 135 aa2.22□□□□□ -2.05
SMG6-208ENST00000570874 LINC00483Q53H64 154 aa2.22□□□□□ -2.05
SMG6-208ENST00000570874 C1orf137Q5JT78 98 aa2.22□□□□□ -2.05
SMG6-208ENST00000570874 C9orf129Q5T035 196 aaKnown RBP2.22□□□□□ -2.05
SMG6-208ENST00000570874 LELP1Q5T871 98 aa2.22□□□□□ -2.05
SMG6-208ENST00000570874 ENHOQ6UWT2 76 aa2.22□□□□□ -2.05
SMG6-208ENST00000570874 Q8IZM0 81 aa2.22□□□□□ -2.05
SMG6-208ENST00000570874 UBL5Q9BZL1 73 aa2.22□□□□□ -2.05
SMG6-208ENST00000570874 TOMM7Q9P0U1 55 aa2.22□□□□□ -2.05
SMG6-208ENST00000570874 KLK12Q9UKR0 248 aa2.22□□□□□ -2.05
SMG6-208ENST00000570874 DNAH1Q9P2D7 4330 aa2.21□□□□□ -2.06
SMG6-208ENST00000570874 TRBV7-4A0A0J9YYF1 115 aa2.21□□□□□ -2.06
SMG6-208ENST00000570874 A0A1B0GU33 70 aa2.21□□□□□ -2.06
SMG6-208ENST00000570874 A8MU10 97 aa2.21□□□□□ -2.06
SMG6-208ENST00000570874 LINC00158P58513 81 aa2.21□□□□□ -2.06
SMG6-208ENST00000570874 KRTAP26-1Q6PEX3 210 aa2.21□□□□□ -2.06
SMG6-208ENST00000570874 SMIM11BQ8TCY0 68 aa2.21□□□□□ -2.06
SMG6-208ENST00000570874 COL6A5A8TX70 2615 aa2.2□□□□□ -2.06
SMG6-208ENST00000570874 LOC110117498A0A087WWA1 95 aa2.2□□□□□ -2.06
SMG6-208ENST00000570874 H3BNG1 76 aa2.2□□□□□ -2.06
SMG6-208ENST00000570874 CCL18P55774 89 aa2.2□□□□□ -2.06
SMG6-208ENST00000570874 SPAG11BQ08648 103 aa2.2□□□□□ -2.06
SMG6-208ENST00000570874 Q5W150 140 aa2.2□□□□□ -2.06
SMG6-208ENST00000570874 CSAG1Q6PB30 78 aa2.2□□□□□ -2.06
SMG6-208ENST00000570874 SPAG11AQ6PDA7 123 aa2.2□□□□□ -2.06
SMG6-208ENST00000570874 Q8N9P0 234 aaPredicted RBP2.2□□□□□ -2.06
SMG6-208ENST00000570874 DMAC1Q96GE9 116 aa2.2□□□□□ -2.06
SMG6-208ENST00000570874 PRR15LQ9BU68 103 aa2.2□□□□□ -2.06
SMG6-208ENST00000570874 PRR34Q9NV39 138 aa2.2□□□□□ -2.06
SMG6-208ENST00000570874 SNURFQ9Y675 71 aa2.2□□□□□ -2.06
SMG6-208ENST00000570874 COL7A1Q02388 2944 aa2.19□□□□□ -2.06
SMG6-208ENST00000570874 PRKDCP78527 4128 aaKnown RBP2.19□□□□□ -2.06
SMG6-208ENST00000570874 IGKV2-28A0A075B6P5 120 aa2.19□□□□□ -2.06
SMG6-208ENST00000570874 IGKV2D-28P01615 120 aa2.19□□□□□ -2.06
SMG6-208ENST00000570874 DEFB116Q30KQ4 102 aa2.19□□□□□ -2.06
SMG6-208ENST00000570874 HIGD2BQ4VC39 106 aa2.19□□□□□ -2.06
SMG6-208ENST00000570874 KRTAP3-1Q9BYR8 98 aa2.19□□□□□ -2.06
SMG6-208ENST00000570874 KRTAP1-5Q9BYS1 174 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms