RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 CEND1Q8N111 149 aa5.12□□□□□ -1.59
GTF3C1-210ENST00000569394 hADV29S1A0JD25 119 aa5.11□□□□□ -1.59
GTF3C1-210ENST00000569394 SPRR1BP22528 89 aa5.11□□□□□ -1.59
GTF3C1-210ENST00000569394 LINC01547P58512 204 aaPredicted RBP5.11□□□□□ -1.59
GTF3C1-210ENST00000569394 LINC00575Q6W349 94 aa5.11□□□□□ -1.59
GTF3C1-210ENST00000569394 Q6ZQY7 126 aa5.11□□□□□ -1.59
GTF3C1-210ENST00000569394 SMIM29Q86T20 159 aa5.11□□□□□ -1.59
GTF3C1-210ENST00000569394 NHP2Q9NX24 153 aaKnown RBP5.11□□□□□ -1.59
GTF3C1-210ENST00000569394 HIGD1BQ9P298 99 aa5.11□□□□□ -1.59
GTF3C1-210ENST00000569394 FXYD2P54710 66 aa5.1□□□□□ -1.59
GTF3C1-210ENST00000569394 Q8N377 158 aa5.1□□□□□ -1.59
GTF3C1-210ENST00000569394 PRO1933Q9H354 126 aa5.09□□□□□ -1.59
GTF3C1-210ENST00000569394 A0A0A0MQY5 61 aa5.08□□□□□ -1.6
GTF3C1-210ENST00000569394 K7ERJ3 54 aa5.08□□□□□ -1.6
GTF3C1-210ENST00000569394 BVES-AS1Q5T3Y7 98 aa5.08□□□□□ -1.6
GTF3C1-210ENST00000569394 IGLV5-48A0A075B6I7 105 aa5.07□□□□□ -1.6
GTF3C1-210ENST00000569394 A0A0B4J2C4 111 aa5.07□□□□□ -1.6
GTF3C1-210ENST00000569394 LOC100996750A0A140TA64 210 aa5.07□□□□□ -1.6
GTF3C1-210ENST00000569394 F8WEM9 126 aa5.07□□□□□ -1.6
GTF3C1-210ENST00000569394 FAM218AQ96MZ4 157 aa5.07□□□□□ -1.6
GTF3C1-210ENST00000569394 KRTAP4-6Q9BYQ5 205 aa5.07□□□□□ -1.6
GTF3C1-210ENST00000569394 PRO1854Q9UHT4 67 aa5.06□□□□□ -1.6
GTF3C1-210ENST00000569394 A0A1B0GV72 72 aa5.05□□□□□ -1.6
GTF3C1-210ENST00000569394 C9orf92A6NGG3 77 aa5.05□□□□□ -1.6
GTF3C1-210ENST00000569394 H3BUT2 72 aa5.05□□□□□ -1.6
GTF3C1-210ENST00000569394 PSMB2P49721 201 aa5.05□□□□□ -1.6
GTF3C1-210ENST00000569394 HSD52Q0P140 79 aa5.05□□□□□ -1.6
GTF3C1-210ENST00000569394 TPRXLQ17RH7 258 aa5.05□□□□□ -1.6
GTF3C1-210ENST00000569394 FP248Q71RG6 208 aaPredicted RBP5.05□□□□□ -1.6
GTF3C1-210ENST00000569394 LIMD2Q9BT23 127 aa5.05□□□□□ -1.6
GTF3C1-210ENST00000569394 SNHG12Q9BXW3 62 aa5.05□□□□□ -1.6
GTF3C1-210ENST00000569394 KRTAP9-2Q9BYQ4 174 aa5.05□□□□□ -1.6
GTF3C1-210ENST00000569394 UQCR10Q9UDW1 63 aa5.05□□□□□ -1.6
GTF3C1-210ENST00000569394 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.04□□□□□ -1.6
GTF3C1-210ENST00000569394 CLEC2BQ92478 149 aa5.04□□□□□ -1.6
GTF3C1-210ENST00000569394 RPS29P62273 56 aaKnown RBP5.03□□□□□ -1.6
GTF3C1-210ENST00000569394 CTAG1AP78358 180 aa5.03□□□□□ -1.6
GTF3C1-210ENST00000569394 KRTAP13-3Q3SY46 172 aa5.03□□□□□ -1.6
GTF3C1-210ENST00000569394 H0YGX0 51 aa5.02□□□□□ -1.61
GTF3C1-210ENST00000569394 SNCGO76070 127 aa5.02□□□□□ -1.61
GTF3C1-210ENST00000569394 OCIAD2Q56VL3 154 aa5.02□□□□□ -1.61
GTF3C1-210ENST00000569394 IGFL1Q6UW32 110 aa5.02□□□□□ -1.61
GTF3C1-210ENST00000569394 MUC17Q685J3 4493 aa5.01□□□□□ -1.61
GTF3C1-210ENST00000569394 FABP2P12104 132 aa5.01□□□□□ -1.61
GTF3C1-210ENST00000569394 CD164Q04900 197 aa5□□□□□ -1.61
GTF3C1-210ENST00000569394 A0A0U1RQV1 116 aa4.99□□□□□ -1.61
GTF3C1-210ENST00000569394 SCGB1C2P0DMR2 95 aa4.99□□□□□ -1.61
GTF3C1-210ENST00000569394 KRTAP19-1Q8IUB9 90 aa4.99□□□□□ -1.61
GTF3C1-210ENST00000569394 KRTAP9-6A0A140TA67 174 aa4.98□□□□□ -1.61
GTF3C1-210ENST00000569394 NDUFV3P56181 108 aaKnown RBP4.98□□□□□ -1.61
GTF3C1-210ENST00000569394 C1orf195Q5TG92 126 aa4.98□□□□□ -1.61
GTF3C1-210ENST00000569394 NAA38Q9BRA0 125 aaKnown RBP4.98□□□□□ -1.61
GTF3C1-210ENST00000569394 MUC2Q02817 5179 aa4.97□□□□□ -1.61
GTF3C1-210ENST00000569394 TCL1BO95988 128 aa4.97□□□□□ -1.61
GTF3C1-210ENST00000569394 DNAL4O96015 105 aa4.97□□□□□ -1.61
GTF3C1-210ENST00000569394 Q6JHZ5 121 aa4.97□□□□□ -1.61
GTF3C1-210ENST00000569394 TRBV7-7A0A0K0K1E9 115 aa4.96□□□□□ -1.62
GTF3C1-210ENST00000569394 H3BMG7 143 aa4.96□□□□□ -1.62
GTF3C1-210ENST00000569394 COX6CP09669 75 aa4.96□□□□□ -1.62
GTF3C1-210ENST00000569394 IGLV8-61A0A075B6I0 122 aa4.95□□□□□ -1.62
GTF3C1-210ENST00000569394 BATFQ16520 125 aa4.95□□□□□ -1.62
GTF3C1-210ENST00000569394 PPDPFLQ8WWR9 84 aa4.95□□□□□ -1.62
GTF3C1-210ENST00000569394 ORMDL1Q9P0S3 153 aa4.95□□□□□ -1.62
GTF3C1-210ENST00000569394 SMIM6P0DI80 62 aa4.94□□□□□ -1.62
GTF3C1-210ENST00000569394 LOC105371267A0A1B0GV96 52 aa4.93□□□□□ -1.62
GTF3C1-210ENST00000569394 KRTAP4-1Q9BYQ7 146 aa4.93□□□□□ -1.62
GTF3C1-210ENST00000569394 A0A087WSZ3 146 aa4.92□□□□□ -1.62
GTF3C1-210ENST00000569394 A0A1B0GX51 115 aa4.92□□□□□ -1.62
GTF3C1-210ENST00000569394 SEC61BP60468 96 aaKnown RBP4.92□□□□□ -1.62
GTF3C1-210ENST00000569394 ASB16-AS1Q495Z4 193 aa4.92□□□□□ -1.62
GTF3C1-210ENST00000569394 PCOTHQ58A44 107 aa4.92□□□□□ -1.62
GTF3C1-210ENST00000569394 Q5XG85 94 aa4.92□□□□□ -1.62
GTF3C1-210ENST00000569394 TSTD3H0UI37 97 aa4.91□□□□□ -1.62
GTF3C1-210ENST00000569394 M0R143 59 aa4.91□□□□□ -1.62
GTF3C1-210ENST00000569394 LST1O00453 97 aa4.91□□□□□ -1.62
GTF3C1-210ENST00000569394 ANKRD29Q8N6D5 301 aa4.91□□□□□ -1.62
GTF3C1-210ENST00000569394 KRTAP4-12Q9BQ66 201 aa4.91□□□□□ -1.62
GTF3C1-210ENST00000569394 VPS25Q9BRG1 176 aa4.91□□□□□ -1.62
GTF3C1-210ENST00000569394 TEN1Q86WV5 123 aa4.9□□□□□ -1.63
GTF3C1-210ENST00000569394 A0A1W2PNM2 257 aa4.89□□□□□ -1.63
GTF3C1-210ENST00000569394 TMEM256-PLSCR3K7ERE1 68 aa4.89□□□□□ -1.63
GTF3C1-210ENST00000569394 OBSCN-AS1Q96MR7 158 aa4.89□□□□□ -1.63
GTF3C1-210ENST00000569394 TRACP01848 142 aa4.88□□□□□ -1.63
GTF3C1-210ENST00000569394 BAALC-AS2P0C853 105 aa4.88□□□□□ -1.63
GTF3C1-210ENST00000569394 DEFB116Q30KQ4 102 aa4.88□□□□□ -1.63
GTF3C1-210ENST00000569394 KRTAP4-8Q9BYQ9 185 aa4.88□□□□□ -1.63
GTF3C1-210ENST00000569394 FAT4Q6V0I7 4981 aa4.88□□□□□ -1.63
GTF3C1-210ENST00000569394 KRTAP9-7A8MTY7 169 aa4.87□□□□□ -1.63
GTF3C1-210ENST00000569394 LCE4AQ5TA78 99 aa4.87□□□□□ -1.63
GTF3C1-210ENST00000569394 CCKP06307 115 aa4.86□□□□□ -1.63
GTF3C1-210ENST00000569394 SIGMAR1Q99720 223 aa4.86□□□□□ -1.63
GTF3C1-210ENST00000569394 SS18L2Q9UHA2 77 aa4.86□□□□□ -1.63
GTF3C1-210ENST00000569394 ATXN8Q156A1 80 aa4.85□□□□□ -1.63
GTF3C1-210ENST00000569394 Q96NJ1 140 aa4.85□□□□□ -1.63
GTF3C1-210ENST00000569394 DSCR10P59022 87 aa4.84□□□□□ -1.63
GTF3C1-210ENST00000569394 RPL37P61927 97 aaKnown RBP4.84□□□□□ -1.63
GTF3C1-210ENST00000569394 RBM3P98179 157 aaKnown RBP4.84□□□□□ -1.63
GTF3C1-210ENST00000569394 UBE2V1Q13404 147 aa4.84□□□□□ -1.63
GTF3C1-210ENST00000569394 Q6Q795 121 aa4.84□□□□□ -1.63
GTF3C1-210ENST00000569394 H3BQ85 93 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms