RNA–Protein interactions for RNA: ENST00000569336.2

CLN6-209, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-209ENST00000569336 Q8N377 158 aa5.59□□□□□ -1.51
CLN6-209ENST00000569336 PRO1933Q9H354 126 aa5.59□□□□□ -1.51
CLN6-209ENST00000569336 A0A0U1RQV1 116 aa5.58□□□□□ -1.52
CLN6-209ENST00000569336 H7C2G1 150 aa5.58□□□□□ -1.52
CLN6-209ENST00000569336 LINC01547P58512 204 aaPredicted RBP5.58□□□□□ -1.52
CLN6-209ENST00000569336 CD164Q04900 197 aa5.58□□□□□ -1.52
CLN6-209ENST00000569336 Q6ZQY7 126 aa5.58□□□□□ -1.52
CLN6-209ENST00000569336 CDIP1Q9H305 208 aa5.58□□□□□ -1.52
CLN6-209ENST00000569336 HSD52Q0P140 79 aa5.57□□□□□ -1.52
CLN6-209ENST00000569336 PPDPFLQ8WWR9 84 aa5.57□□□□□ -1.52
CLN6-209ENST00000569336 H0YGX0 51 aa5.56□□□□□ -1.52
CLN6-209ENST00000569336 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.56□□□□□ -1.52
CLN6-209ENST00000569336 SMIM29Q86T20 159 aa5.56□□□□□ -1.52
CLN6-209ENST00000569336 UQCR10Q9UDW1 63 aa5.56□□□□□ -1.52
CLN6-209ENST00000569336 PRO1854Q9UHT4 67 aa5.56□□□□□ -1.52
CLN6-209ENST00000569336 OCIAD2Q56VL3 154 aa5.55□□□□□ -1.52
CLN6-209ENST00000569336 GHRHP01286 108 aa5.54□□□□□ -1.52
CLN6-209ENST00000569336 FXYD2P54710 66 aa5.54□□□□□ -1.52
CLN6-209ENST00000569336 HRCT1Q6UXD1 115 aa5.54□□□□□ -1.52
CLN6-209ENST00000569336 Q6JHZ5 121 aa5.53□□□□□ -1.52
CLN6-209ENST00000569336 A0A1B0GX51 115 aa5.52□□□□□ -1.53
CLN6-209ENST00000569336 KRTAP13-3Q3SY46 172 aa5.52□□□□□ -1.53
CLN6-209ENST00000569336 MUC2Q02817 5179 aa5.52□□□□□ -1.53
CLN6-209ENST00000569336 C21orf62-AS1Q17RA5 79 aa5.51□□□□□ -1.53
CLN6-209ENST00000569336 Q5XG85 94 aa5.51□□□□□ -1.53
CLN6-209ENST00000569336 CLEC2BQ92478 149 aa5.51□□□□□ -1.53
CLN6-209ENST00000569336 SNHG12Q9BXW3 62 aa5.51□□□□□ -1.53
CLN6-209ENST00000569336 IGLV8-61A0A075B6I0 122 aa5.5□□□□□ -1.53
CLN6-209ENST00000569336 COX6CP09669 75 aa5.5□□□□□ -1.53
CLN6-209ENST00000569336 SMIM6P0DI80 62 aa5.5□□□□□ -1.53
CLN6-209ENST00000569336 TRIAP1O43715 76 aa5.49□□□□□ -1.53
CLN6-209ENST00000569336 TCL1BO95988 128 aa5.49□□□□□ -1.53
CLN6-209ENST00000569336 DNAL4O96015 105 aa5.49□□□□□ -1.53
CLN6-209ENST00000569336 PSMB2P49721 201 aa5.49□□□□□ -1.53
CLN6-209ENST00000569336 FAM218AQ96MZ4 157 aa5.48□□□□□ -1.53
CLN6-209ENST00000569336 H3BQ85 93 aa5.47□□□□□ -1.53
CLN6-209ENST00000569336 K7ERJ3 54 aa5.47□□□□□ -1.53
CLN6-209ENST00000569336 IGFL1Q6UW32 110 aa5.47□□□□□ -1.53
CLN6-209ENST00000569336 M0R143 59 aa5.46□□□□□ -1.54
CLN6-209ENST00000569336 A0A0G2JQZ4 141 aa5.45□□□□□ -1.54
CLN6-209ENST00000569336 NDUFV3P56181 108 aaKnown RBP5.45□□□□□ -1.54
CLN6-209ENST00000569336 CRCT1Q9UGL9 99 aa5.45□□□□□ -1.54
CLN6-209ENST00000569336 TRBV7-7A0A0K0K1E9 115 aa5.44□□□□□ -1.54
CLN6-209ENST00000569336 SEC61BP60468 96 aaKnown RBP5.44□□□□□ -1.54
CLN6-209ENST00000569336 ASB16-AS1Q495Z4 193 aa5.44□□□□□ -1.54
CLN6-209ENST00000569336 ORMDL1Q9P0S3 153 aa5.44□□□□□ -1.54
CLN6-209ENST00000569336 SS18L2Q9UHA2 77 aa5.44□□□□□ -1.54
CLN6-209ENST00000569336 MUC17Q685J3 4493 aa5.44□□□□□ -1.54
CLN6-209ENST00000569336 FSIP2Q5CZC0 6907 aa5.44□□□□□ -1.54
CLN6-209ENST00000569336 TSTD3H0UI37 97 aa5.43□□□□□ -1.54
CLN6-209ENST00000569336 H3BUT2 72 aa5.43□□□□□ -1.54
CLN6-209ENST00000569336 FABP2P12104 132 aa5.43□□□□□ -1.54
CLN6-209ENST00000569336 C1orf195Q5TG92 126 aa5.43□□□□□ -1.54
CLN6-209ENST00000569336 H3BMG7 143 aa5.42□□□□□ -1.54
CLN6-209ENST00000569336 XP32Q5T750 250 aa5.42□□□□□ -1.54
CLN6-209ENST00000569336 LCE2AQ5TA79 106 aaPredicted RBP5.42□□□□□ -1.54
CLN6-209ENST00000569336 TMEM256-PLSCR3K7ERE1 68 aa5.41□□□□□ -1.54
CLN6-209ENST00000569336 Q6Q795 121 aa5.41□□□□□ -1.54
CLN6-209ENST00000569336 TEN1Q86WV5 123 aa5.41□□□□□ -1.54
CLN6-209ENST00000569336 C9orf92A6NGG3 77 aa5.4□□□□□ -1.54
CLN6-209ENST00000569336 TRACP01848 142 aa5.4□□□□□ -1.54
CLN6-209ENST00000569336 SCGB1C2P0DMR2 95 aa5.4□□□□□ -1.54
CLN6-209ENST00000569336 LST1O00453 97 aa5.38□□□□□ -1.55
CLN6-209ENST00000569336 UBE2V1Q13404 147 aa5.37□□□□□ -1.55
CLN6-209ENST00000569336 LYRM7Q5U5X0 104 aa5.37□□□□□ -1.55
CLN6-209ENST00000569336 ANKRD29Q8N6D5 301 aa5.36□□□□□ -1.55
CLN6-209ENST00000569336 A0A087WSZ3 146 aa5.35□□□□□ -1.55
CLN6-209ENST00000569336 TRBV7-4A0A0J9YYF1 115 aa5.35□□□□□ -1.55
CLN6-209ENST00000569336 LOC105371267A0A1B0GV96 52 aa5.34□□□□□ -1.55
CLN6-209ENST00000569336 ATXN8Q156A1 80 aa5.34□□□□□ -1.55
CLN6-209ENST00000569336 A0A1B0GV72 72 aa5.33□□□□□ -1.56
CLN6-209ENST00000569336 A0A1W2PNM2 257 aa5.32□□□□□ -1.56
CLN6-209ENST00000569336 CCKP06307 115 aa5.32□□□□□ -1.56
CLN6-209ENST00000569336 DSCR8Q96T75 97 aa5.32□□□□□ -1.56
CLN6-209ENST00000569336 RPL37P61927 97 aaKnown RBP5.31□□□□□ -1.56
CLN6-209ENST00000569336 RBM3P98179 157 aaKnown RBP5.31□□□□□ -1.56
CLN6-209ENST00000569336 BATFQ16520 125 aa5.31□□□□□ -1.56
CLN6-209ENST00000569336 TRBV20-1A0A075B6N2 111 aa5.3□□□□□ -1.56
CLN6-209ENST00000569336 BAALC-AS2P0C853 105 aa5.3□□□□□ -1.56
CLN6-209ENST00000569336 PCOTHQ58A44 107 aa5.3□□□□□ -1.56
CLN6-209ENST00000569336 SIGMAR1Q99720 223 aa5.3□□□□□ -1.56
CLN6-209ENST00000569336 NAA38Q9BRA0 125 aaKnown RBP5.3□□□□□ -1.56
CLN6-209ENST00000569336 OBSCN-AS1Q96MR7 158 aa5.29□□□□□ -1.56
CLN6-209ENST00000569336 VPS25Q9BRG1 176 aa5.29□□□□□ -1.56
CLN6-209ENST00000569336 C9JAW5 83 aa5.28□□□□□ -1.56
CLN6-209ENST00000569336 JMJD7-PLA2G4BH0Y9G9 81 aa5.28□□□□□ -1.56
CLN6-209ENST00000569336 Q96NJ1 140 aa5.28□□□□□ -1.56
CLN6-209ENST00000569336 IGKV4-1P06312 121 aa5.26□□□□□ -1.57
CLN6-209ENST00000569336 Q75L30 129 aa5.26□□□□□ -1.57
CLN6-209ENST00000569336 KRTAP4-1Q9BYQ7 146 aa5.26□□□□□ -1.57
CLN6-209ENST00000569336 PDE6GP18545 87 aa5.25□□□□□ -1.57
CLN6-209ENST00000569336 ATP11AUNQ6ZP68 121 aa5.25□□□□□ -1.57
CLN6-209ENST00000569336 A0A1B0GW54 56 aa5.24□□□□□ -1.57
CLN6-209ENST00000569336 C9orf118A6NHY6 69 aa5.24□□□□□ -1.57
CLN6-209ENST00000569336 LOC110117498A0A087WWA1 95 aa5.23□□□□□ -1.57
CLN6-209ENST00000569336 A0A1W2PPM0 123 aa5.23□□□□□ -1.57
CLN6-209ENST00000569336 H3BT86 120 aa5.22□□□□□ -1.57
CLN6-209ENST00000569336 J3KT08 172 aa5.22□□□□□ -1.57
CLN6-209ENST00000569336 TAX1BP3O14907 124 aa5.22□□□□□ -1.57
CLN6-209ENST00000569336 Q6ZQT0 140 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms