RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243		A0A1B0GUL6	1792 aa		0.35	□□□□□ -2.35
UBR1-209	ENST00000569243	ANKRD36C	Q5JPF3	1778 aa		0.35	□□□□□ -2.35
UBR1-209	ENST00000569243	CSPG4	Q6UVK1	2322 aa		0.35	□□□□□ -2.35
UBR1-209	ENST00000569243	SPINK4	O60575	86 aa		0.35	□□□□□ -2.35
UBR1-209	ENST00000569243	KRTAP2-3	P0C7H8	128 aa		0.35	□□□□□ -2.35
UBR1-209	ENST00000569243	DEFB130B	P0DP73	79 aa		0.35	□□□□□ -2.35
UBR1-209	ENST00000569243	DEFB130A	P0DP74	79 aa		0.35	□□□□□ -2.35
UBR1-209	ENST00000569243	PLN	P26678	52 aa		0.35	□□□□□ -2.35
UBR1-209	ENST00000569243	MINOS1	Q5TGZ0	78 aa		0.35	□□□□□ -2.35
UBR1-209	ENST00000569243	KRTAP2-4	Q9BYR9	128 aa		0.35	□□□□□ -2.35
UBR1-209	ENST00000569243	KRTAP2-1	Q9BYU5	128 aa		0.35	□□□□□ -2.35
UBR1-209	ENST00000569243	TOGARAM1	Q9Y4F4	1720 aa		0.35	□□□□□ -2.35
UBR1-209	ENST00000569243	DSP	P15924	2871 aa	Known RBP	0.35	□□□□□ -2.35
UBR1-209	ENST00000569243	TRANK1	O15050	2925 aa		0.34	□□□□□ -2.35
UBR1-209	ENST00000569243	TOP2A	P11388	1531 aa	Known RBP	0.34	□□□□□ -2.35
UBR1-209	ENST00000569243	SERF2	P84101	59 aa		0.34	□□□□□ -2.36
UBR1-209	ENST00000569243	TFF3	Q07654	80 aa		0.34	□□□□□ -2.36
UBR1-209	ENST00000569243	KRTAP19-3	Q7Z4W3	81 aa		0.34	□□□□□ -2.36
UBR1-209	ENST00000569243	TOMM5	Q8N4H5	51 aa		0.34	□□□□□ -2.36
UBR1-209	ENST00000569243	CMC2	Q9NRP2	79 aa		0.34	□□□□□ -2.36
UBR1-209	ENST00000569243	ZFYVE26	Q68DK2	2539 aa		0.34	□□□□□ -2.36
UBR1-209	ENST00000569243	NRXN3	Q9Y4C0	1643 aa		0.34	□□□□□ -2.36
UBR1-209	ENST00000569243	VPS13B	Q7Z7G8	4022 aa		0.34	□□□□□ -2.36
UBR1-209	ENST00000569243	KIAA0586	Q9BVV6	1533 aa		0.33	□□□□□ -2.36
UBR1-209	ENST00000569243	APC	P25054	2843 aa		0.33	□□□□□ -2.36
UBR1-209	ENST00000569243	ABCC8	Q09428	1581 aa		0.33	□□□□□ -2.36
UBR1-209	ENST00000569243	KMT2A	Q03164	3969 aa		0.33	□□□□□ -2.36
UBR1-209	ENST00000569243	RPS27	P42677	84 aa	Known RBP	0.33	□□□□□ -2.36
UBR1-209	ENST00000569243	SPINK6	Q6UWN8	80 aa		0.33	□□□□□ -2.36
UBR1-209	ENST00000569243	RPS27L	Q71UM5	84 aa	Known RBP	0.33	□□□□□ -2.36
UBR1-209	ENST00000569243	LINC00308	Q8TCZ7	52 aa		0.33	□□□□□ -2.36
UBR1-209	ENST00000569243	ABRACL	Q9P1F3	81 aa		0.33	□□□□□ -2.36
UBR1-209	ENST00000569243	C6orf48	Q9UBA6	75 aa		0.33	□□□□□ -2.36
UBR1-209	ENST00000569243	DEPDC5	O75140	1603 aa		0.33	□□□□□ -2.36
UBR1-209	ENST00000569243	ADCY10	Q96PN6	1610 aa		0.33	□□□□□ -2.36
UBR1-209	ENST00000569243	CHD8	Q9HCK8	2581 aa		0.33	□□□□□ -2.36
UBR1-209	ENST00000569243	HUWE1	Q7Z6Z7	4374 aa	Known RBP	0.33	□□□□□ -2.36
UBR1-209	ENST00000569243	TNXB	P22105	4242 aa		0.33	□□□□□ -2.36
UBR1-209	ENST00000569243	PCNX1	Q96RV3	2341 aa		0.32	□□□□□ -2.36
UBR1-209	ENST00000569243	HECTD1	Q9ULT8	2610 aa		0.32	□□□□□ -2.36
UBR1-209	ENST00000569243	SMIM27	A0A1W2PRY6	76 aa		0.32	□□□□□ -2.36
UBR1-209	ENST00000569243	LYNX1	G3V0Z9	82 aa		0.32	□□□□□ -2.36
UBR1-209	ENST00000569243	MUC5AC	P98088	5654 aa		0.32	□□□□□ -2.36
UBR1-209	ENST00000569243	MAP1B	P46821	2468 aa	Known RBP	0.31	□□□□□ -2.36
UBR1-209	ENST00000569243	VWF	P04275	2813 aa		0.31	□□□□□ -2.36
UBR1-209	ENST00000569243	CDC42BPA	Q5VT25	1732 aa		0.31	□□□□□ -2.36
UBR1-209	ENST00000569243		H0YGX0	51 aa		0.31	□□□□□ -2.36
UBR1-209	ENST00000569243	PRLH	P81277	87 aa		0.31	□□□□□ -2.36
UBR1-209	ENST00000569243	DEFB106A	Q8N104	65 aa		0.31	□□□□□ -2.36
UBR1-209	ENST00000569243	SMR3A	Q99954	134 aa		0.31	□□□□□ -2.36
UBR1-209	ENST00000569243	TMEM167B	Q9NRX6	74 aa		0.31	□□□□□ -2.36
UBR1-209	ENST00000569243	KAAG1	Q9UBP8	84 aa		0.31	□□□□□ -2.36
UBR1-209	ENST00000569243	HECTD4	Q9Y4D8	3996 aa		0.3	□□□□□ -2.36
UBR1-209	ENST00000569243	IQGAP1	P46940	1657 aa		0.3	□□□□□ -2.36
UBR1-209	ENST00000569243	LMO7	Q8WWI1	1683 aa		0.3	□□□□□ -2.36
UBR1-209	ENST00000569243	AKAP13	Q12802	2813 aa		0.3	□□□□□ -2.36
UBR1-209	ENST00000569243	DNAH11	Q96DT5	4516 aa		0.3	□□□□□ -2.36
UBR1-209	ENST00000569243	PHGR1	C9JFL3	82 aa		0.3	□□□□□ -2.36
UBR1-209	ENST00000569243	SPINK1	P00995	79 aa		0.3	□□□□□ -2.36
UBR1-209	ENST00000569243	WFDC10B	Q8IUB3	73 aa		0.3	□□□□□ -2.36
UBR1-209	ENST00000569243		S4R3F8	94 aa		0.3	□□□□□ -2.36
UBR1-209	ENST00000569243	IQGAP2	Q13576	1575 aa		0.3	□□□□□ -2.36
UBR1-209	ENST00000569243	LRP1	Q07954	4544 aa	Known RBP	0.3	□□□□□ -2.36
UBR1-209	ENST00000569243	NBAS	A2RRP1	2371 aa		0.3	□□□□□ -2.36
UBR1-209	ENST00000569243	CREBBP	Q92793	2442 aa		0.29	□□□□□ -2.36
UBR1-209	ENST00000569243	UBR5	O95071	2799 aa	Predicted RBP	0.29	□□□□□ -2.36
UBR1-209	ENST00000569243	TENM4	Q6N022	2769 aa		0.29	□□□□□ -2.36
UBR1-209	ENST00000569243	CEP290	O15078	2479 aa		0.29	□□□□□ -2.36
UBR1-209	ENST00000569243	PTPN13	Q12923	2485 aa		0.29	□□□□□ -2.36
UBR1-209	ENST00000569243	PKD1L2	Q7Z442	2459 aa		0.29	□□□□□ -2.36
UBR1-209	ENST00000569243	NFAT5	O94916	1531 aa		0.29	□□□□□ -2.36
UBR1-209	ENST00000569243	GPR98	Q8WXG9	6306 aa		0.29	□□□□□ -2.36
UBR1-209	ENST00000569243	USP24	Q9UPU5	2620 aa		0.29	□□□□□ -2.36
UBR1-209	ENST00000569243	LINC01546	A6NGU7	62 aa		0.29	□□□□□ -2.36
UBR1-209	ENST00000569243	WT1-AS	Q06250	92 aa		0.29	□□□□□ -2.36
UBR1-209	ENST00000569243	FAM208A	Q9UK61	1670 aa	Known RBP	0.29	□□□□□ -2.36
UBR1-209	ENST00000569243	EP300	Q09472	2414 aa	Predicted RBP	0.29	□□□□□ -2.36
UBR1-209	ENST00000569243	DDX60	Q8IY21	1712 aa	Known RBP	0.29	□□□□□ -2.36
UBR1-209	ENST00000569243	OTOG	Q6ZRI0	2925 aa		0.29	□□□□□ -2.36
UBR1-209	ENST00000569243	CELSR1	Q9NYQ6	3014 aa		0.29	□□□□□ -2.36
UBR1-209	ENST00000569243	UNC79	Q9P2D8	2635 aa		0.29	□□□□□ -2.36
UBR1-209	ENST00000569243	CUBN	O60494	3623 aa		0.28	□□□□□ -2.36
UBR1-209	ENST00000569243	LPA	P08519	4548 aa		0.28	□□□□□ -2.36
UBR1-209	ENST00000569243	WNK1	Q9H4A3	2382 aa		0.28	□□□□□ -2.36
UBR1-209	ENST00000569243	NAV2	Q8IVL1	2488 aa		0.28	□□□□□ -2.36
UBR1-209	ENST00000569243	TNRC18	O15417	2968 aa	Predicted RBP	0.28	□□□□□ -2.36
UBR1-209	ENST00000569243	AKAP9	Q99996	3911 aa		0.28	□□□□□ -2.36
UBR1-209	ENST00000569243	PRM1	P04553	51 aa		0.28	□□□□□ -2.36
UBR1-209	ENST00000569243	DEFB135	Q30KP9	77 aa		0.28	□□□□□ -2.36
UBR1-209	ENST00000569243	KRTAP21-1	Q3LI58	79 aa		0.28	□□□□□ -2.36
UBR1-209	ENST00000569243		U3KQA8	63 aa		0.28	□□□□□ -2.36
UBR1-209	ENST00000569243	PRRC2C	Q9Y520	2896 aa	Known RBP	0.28	□□□□□ -2.36
UBR1-209	ENST00000569243	DNAH3	Q8TD57	4116 aa		0.28	□□□□□ -2.36
UBR1-209	ENST00000569243		H0YGG7	62 aa		0.27	□□□□□ -2.37
UBR1-209	ENST00000569243		M0R2T5	61 aa		0.27	□□□□□ -2.37
UBR1-209	ENST00000569243	SMIM2	Q9BVW6	85 aa		0.27	□□□□□ -2.37
UBR1-209	ENST00000569243	SPTBN5	Q9NRC6	3674 aa	Known RBP	0.27	□□□□□ -2.37
UBR1-209	ENST00000569243	APC2	O95996	2303 aa		0.26	□□□□□ -2.37
UBR1-209	ENST00000569243	HIVEP3	Q5T1R4	2406 aa		0.26	□□□□□ -2.37
UBR1-209	ENST00000569243	SACS	Q9NZJ4	4579 aa		0.26	□□□□□ -2.37

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