RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 HERC1Q15751 4861 aa9.78□□□□□ -0.84
COMMD4-224ENST00000568877 OCIAD2Q56VL3 154 aa9.77□□□□□ -0.85
COMMD4-224ENST00000568877 C9orf153Q5TBE3 101 aa9.77□□□□□ -0.85
COMMD4-224ENST00000568877 SSBP3-AS1Q7Z2R9 100 aa9.77□□□□□ -0.85
COMMD4-224ENST00000568877 LINC00304Q8N9R0 145 aa9.76□□□□□ -0.85
COMMD4-224ENST00000568877 Q8NBF4 154 aa9.76□□□□□ -0.85
COMMD4-224ENST00000568877 PPDPFLQ8WWR9 84 aa9.76□□□□□ -0.85
COMMD4-224ENST00000568877 TAX1BP3O14907 124 aa9.74□□□□□ -0.85
COMMD4-224ENST00000568877 DNAL4O96015 105 aa9.74□□□□□ -0.85
COMMD4-224ENST00000568877 H3BUT2 72 aa9.73□□□□□ -0.85
COMMD4-224ENST00000568877 LST1O00453 97 aa9.73□□□□□ -0.85
COMMD4-224ENST00000568877 GHRHP01286 108 aa9.73□□□□□ -0.85
COMMD4-224ENST00000568877 C9orf118A6NHY6 69 aa9.72□□□□□ -0.85
COMMD4-224ENST00000568877 TRACP01848 142 aa9.72□□□□□ -0.85
COMMD4-224ENST00000568877 SPAG11AQ6PDA7 123 aa9.71□□□□□ -0.86
COMMD4-224ENST00000568877 F8WEM9 126 aa9.7□□□□□ -0.86
COMMD4-224ENST00000568877 C4orf48Q5BLP8 95 aa9.7□□□□□ -0.86
COMMD4-224ENST00000568877 COL5A1-AS1Q5SY13 56 aa9.7□□□□□ -0.86
COMMD4-224ENST00000568877 LYRM7Q5U5X0 104 aa9.7□□□□□ -0.86
COMMD4-224ENST00000568877 ORMDL1Q9P0S3 153 aa9.7□□□□□ -0.86
COMMD4-224ENST00000568877 TCL1BO95988 128 aa9.69□□□□□ -0.86
COMMD4-224ENST00000568877 H3BQ85 93 aa9.68□□□□□ -0.86
COMMD4-224ENST00000568877 FABP2P12104 132 aa9.68□□□□□ -0.86
COMMD4-224ENST00000568877 ATXN8Q156A1 80 aa9.68□□□□□ -0.86
COMMD4-224ENST00000568877 A0A1W2PPM0 123 aa9.66□□□□□ -0.86
COMMD4-224ENST00000568877 NDUFV3P56181 108 aaKnown RBP9.66□□□□□ -0.86
COMMD4-224ENST00000568877 IGLV8-61A0A075B6I0 122 aa9.65□□□□□ -0.86
COMMD4-224ENST00000568877 TRBV20-1A0A075B6N2 111 aa9.65□□□□□ -0.86
COMMD4-224ENST00000568877 TMEM256-PLSCR3K7ERE1 68 aa9.65□□□□□ -0.86
COMMD4-224ENST00000568877 SPINK1P00995 79 aa9.65□□□□□ -0.86
COMMD4-224ENST00000568877 A0A0G2JQZ4 141 aa9.62□□□□□ -0.87
COMMD4-224ENST00000568877 Q6JHZ5 121 aa9.62□□□□□ -0.87
COMMD4-224ENST00000568877 H3BMG7 143 aa9.61□□□□□ -0.87
COMMD4-224ENST00000568877 BAALC-AS2P0C853 105 aa9.61□□□□□ -0.87
COMMD4-224ENST00000568877 HRCT1Q6UXD1 115 aa9.61□□□□□ -0.87
COMMD4-224ENST00000568877 RPS29P62273 56 aaKnown RBP9.6□□□□□ -0.87
COMMD4-224ENST00000568877 CD164Q04900 197 aa9.6□□□□□ -0.87
COMMD4-224ENST00000568877 UBE2V1Q13404 147 aa9.6□□□□□ -0.87
COMMD4-224ENST00000568877 IGFL1Q6UW32 110 aa9.6□□□□□ -0.87
COMMD4-224ENST00000568877 HMCN2Q8NDA2 5059 aa9.57□□□□□ -0.88
COMMD4-224ENST00000568877 ANKRD29Q8N6D5 301 aa9.56□□□□□ -0.88
COMMD4-224ENST00000568877 SPCS1Q9Y6A9 102 aa9.56□□□□□ -0.88
COMMD4-224ENST00000568877 C9JAW5 83 aa9.55□□□□□ -0.88
COMMD4-224ENST00000568877 RETNLBQ9BQ08 111 aa9.54□□□□□ -0.88
COMMD4-224ENST00000568877 A0A1B0GV72 72 aa9.53□□□□□ -0.88
COMMD4-224ENST00000568877 LIMD2Q9BT23 127 aa9.53□□□□□ -0.88
COMMD4-224ENST00000568877 PRR4Q16378 134 aa9.52□□□□□ -0.89
COMMD4-224ENST00000568877 Q5XG85 94 aa9.5□□□□□ -0.89
COMMD4-224ENST00000568877 TRBV7-7A0A0K0K1E9 115 aa9.49□□□□□ -0.89
COMMD4-224ENST00000568877 RBM3P98179 157 aaKnown RBP9.49□□□□□ -0.89
COMMD4-224ENST00000568877 Q6Q795 121 aa9.49□□□□□ -0.89
COMMD4-224ENST00000568877 H3BT86 120 aa9.48□□□□□ -0.89
COMMD4-224ENST00000568877 K7EP34 96 aa9.48□□□□□ -0.89
COMMD4-224ENST00000568877 TEN1Q86WV5 123 aa9.48□□□□□ -0.89
COMMD4-224ENST00000568877 MTURNQ8N3F0 131 aa9.47□□□□□ -0.89
COMMD4-224ENST00000568877 A0A1W2PNM2 257 aa9.46□□□□□ -0.9
COMMD4-224ENST00000568877 JMJD7-PLA2G4BH0Y9G9 81 aa9.46□□□□□ -0.9
COMMD4-224ENST00000568877 DSCR8Q96T75 97 aa9.46□□□□□ -0.9
COMMD4-224ENST00000568877 TRBV7-4A0A0J9YYF1 115 aa9.45□□□□□ -0.9
COMMD4-224ENST00000568877 FP248Q71RG6 208 aaPredicted RBP9.45□□□□□ -0.9
COMMD4-224ENST00000568877 IGLV7-46A0A075B6I9 117 aa9.43□□□□□ -0.9
COMMD4-224ENST00000568877 GTF2H5Q6ZYL4 71 aa9.43□□□□□ -0.9
COMMD4-224ENST00000568877 CCKP06307 115 aa9.42□□□□□ -0.9
COMMD4-224ENST00000568877 OBSCN-AS1Q96MR7 158 aa9.42□□□□□ -0.9
COMMD4-224ENST00000568877 ASB16-AS1Q495Z4 193 aa9.41□□□□□ -0.9
COMMD4-224ENST00000568877 A0A087WSZ3 146 aa9.4□□□□□ -0.9
COMMD4-224ENST00000568877 C1orf195Q5TG92 126 aa9.4□□□□□ -0.9
COMMD4-224ENST00000568877 SMCPP49901 116 aaPredicted RBP9.39□□□□□ -0.91
COMMD4-224ENST00000568877 SS18L2Q9UHA2 77 aa9.39□□□□□ -0.91
COMMD4-224ENST00000568877 PRO0461Q9UI25 63 aa9.39□□□□□ -0.91
COMMD4-224ENST00000568877 LPAP08519 4548 aa9.39□□□□□ -0.91
COMMD4-224ENST00000568877 LOC110117498A0A087WWA1 95 aa9.38□□□□□ -0.91
COMMD4-224ENST00000568877 VPS25Q9BRG1 176 aa9.38□□□□□ -0.91
COMMD4-224ENST00000568877 C14orf132Q9NPU4 83 aa9.38□□□□□ -0.91
COMMD4-224ENST00000568877 PDE6GP18545 87 aa9.37□□□□□ -0.91
COMMD4-224ENST00000568877 Q6ZQT0 140 aa9.37□□□□□ -0.91
COMMD4-224ENST00000568877 TPRXLQ17RH7 258 aa9.34□□□□□ -0.91
COMMD4-224ENST00000568877 LRP2P98164 4655 aa9.33□□□□□ -0.92
COMMD4-224ENST00000568877 F8W1H4 67 aa9.32□□□□□ -0.92
COMMD4-224ENST00000568877 C21orf62-AS1Q17RA5 79 aa9.31□□□□□ -0.92
COMMD4-224ENST00000568877 KRTAP13-3Q3SY46 172 aa9.3□□□□□ -0.92
COMMD4-224ENST00000568877 A0A1B0GW54 56 aa9.29□□□□□ -0.92
COMMD4-224ENST00000568877 Q96NJ1 140 aa9.28□□□□□ -0.92
COMMD4-224ENST00000568877 CDIP1Q9H305 208 aa9.28□□□□□ -0.92
COMMD4-224ENST00000568877 A0A1B0GV90 55 aa9.26□□□□□ -0.93
COMMD4-224ENST00000568877 LINC00472Q9H8W2 130 aa9.24□□□□□ -0.93
COMMD4-224ENST00000568877 ETDBQ3ZM63 59 aa9.22□□□□□ -0.93
COMMD4-224ENST00000568877 C9orf92A6NGG3 77 aa9.21□□□□□ -0.94
COMMD4-224ENST00000568877 UBR4Q5T4S7 5183 aa9.2□□□□□ -0.94
COMMD4-224ENST00000568877 IGKV4-1P06312 121 aa9.2□□□□□ -0.94
COMMD4-224ENST00000568877 DEFB116Q30KQ4 102 aa9.2□□□□□ -0.94
COMMD4-224ENST00000568877 SIGMAR1Q99720 223 aa9.19□□□□□ -0.94
COMMD4-224ENST00000568877 NREPQ16612 68 aa9.16□□□□□ -0.94
COMMD4-224ENST00000568877 XP32Q5T750 250 aa9.16□□□□□ -0.94
COMMD4-224ENST00000568877 J3KT08 172 aa9.15□□□□□ -0.94
COMMD4-224ENST00000568877 MUC17Q685J3 4493 aa9.12□□□□□ -0.95
COMMD4-224ENST00000568877 DSCR10P59022 87 aa9.08□□□□□ -0.96
COMMD4-224ENST00000568877 Q6ZVQ6 151 aa9.08□□□□□ -0.96
COMMD4-224ENST00000568877 LINC00846Q9NV44 126 aa9.08□□□□□ -0.96
COMMD4-224ENST00000568877 IGHV6-1A0A0B4J1U7 121 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms