RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-207	ENST00000568782	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	5.78	□□□□□ -1.48
UBR1-207	ENST00000568782	SMIM29	Q86T20	159 aa		5.78	□□□□□ -1.48
UBR1-207	ENST00000568782	SNHG12	Q9BXW3	62 aa		5.78	□□□□□ -1.48
UBR1-207	ENST00000568782	HIGD1B	Q9P298	99 aa		5.78	□□□□□ -1.48
UBR1-207	ENST00000568782	ASB16-AS1	Q495Z4	193 aa		5.77	□□□□□ -1.49
UBR1-207	ENST00000568782		Q6JHZ5	121 aa		5.77	□□□□□ -1.49
UBR1-207	ENST00000568782	PPDPFL	Q8WWR9	84 aa		5.77	□□□□□ -1.49
UBR1-207	ENST00000568782		H0YGX0	51 aa		5.76	□□□□□ -1.49
UBR1-207	ENST00000568782	OCIAD2	Q56VL3	154 aa		5.76	□□□□□ -1.49
UBR1-207	ENST00000568782		Q5XG85	94 aa		5.76	□□□□□ -1.49
UBR1-207	ENST00000568782	CFC1B	P0CG36	223 aa		5.75	□□□□□ -1.49
UBR1-207	ENST00000568782	CFC1	P0CG37	223 aa		5.75	□□□□□ -1.49
UBR1-207	ENST00000568782		A0A0B4J2C4	111 aa		5.74	□□□□□ -1.49
UBR1-207	ENST00000568782	C9orf92	A6NGG3	77 aa		5.73	□□□□□ -1.49
UBR1-207	ENST00000568782	XP32	Q5T750	250 aa		5.73	□□□□□ -1.49
UBR1-207	ENST00000568782	CEND1	Q8N111	149 aa		5.73	□□□□□ -1.49
UBR1-207	ENST00000568782	CLEC2B	Q92478	149 aa		5.73	□□□□□ -1.49
UBR1-207	ENST00000568782	PRO1854	Q9UHT4	67 aa		5.73	□□□□□ -1.49
UBR1-207	ENST00000568782		A0A0G2JQZ4	141 aa		5.71	□□□□□ -1.5
UBR1-207	ENST00000568782	C1orf195	Q5TG92	126 aa		5.71	□□□□□ -1.5
UBR1-207	ENST00000568782	IGLV8-61	A0A075B6I0	122 aa		5.7	□□□□□ -1.5
UBR1-207	ENST00000568782	C2orf91	Q6ZV80	131 aa		5.7	□□□□□ -1.5
UBR1-207	ENST00000568782	TRBV7-7	A0A0K0K1E9	115 aa		5.69	□□□□□ -1.5
UBR1-207	ENST00000568782		A0A1B0GX51	115 aa		5.69	□□□□□ -1.5
UBR1-207	ENST00000568782	DNAL4	O96015	105 aa		5.69	□□□□□ -1.5
UBR1-207	ENST00000568782	COX6C	P09669	75 aa		5.69	□□□□□ -1.5
UBR1-207	ENST00000568782	IGFL1	Q6UW32	110 aa		5.69	□□□□□ -1.5
UBR1-207	ENST00000568782	MUC2	Q02817	5179 aa		5.68	□□□□□ -1.5
UBR1-207	ENST00000568782	PSMB2	P49721	201 aa		5.68	□□□□□ -1.5
UBR1-207	ENST00000568782	SS18L2	Q9UHA2	77 aa		5.68	□□□□□ -1.5
UBR1-207	ENST00000568782		H3BQ85	93 aa		5.67	□□□□□ -1.5
UBR1-207	ENST00000568782	FABP2	P12104	132 aa		5.67	□□□□□ -1.5
UBR1-207	ENST00000568782	NDUFV3	P56181	108 aa	Known RBP	5.67	□□□□□ -1.5
UBR1-207	ENST00000568782	HSD52	Q0P140	79 aa		5.67	□□□□□ -1.5
UBR1-207	ENST00000568782		H3BUT2	72 aa		5.66	□□□□□ -1.5
UBR1-207	ENST00000568782	LST1	O00453	97 aa		5.66	□□□□□ -1.5
UBR1-207	ENST00000568782	PYY3	Q5JQD4	70 aa		5.66	□□□□□ -1.5
UBR1-207	ENST00000568782		H3BMG7	143 aa		5.65	□□□□□ -1.5
UBR1-207	ENST00000568782	FXYD2	P54710	66 aa		5.65	□□□□□ -1.5
UBR1-207	ENST00000568782	PCOTH	Q58A44	107 aa		5.65	□□□□□ -1.5
UBR1-207	ENST00000568782	TEN1	Q86WV5	123 aa		5.65	□□□□□ -1.5
UBR1-207	ENST00000568782	UQCR10	Q9UDW1	63 aa		5.65	□□□□□ -1.5
UBR1-207	ENST00000568782	TRIAP1	O43715	76 aa		5.63	□□□□□ -1.51
UBR1-207	ENST00000568782	SVIP	Q8NHG7	77 aa		5.63	□□□□□ -1.51
UBR1-207	ENST00000568782	FAM218A	Q96MZ4	157 aa		5.63	□□□□□ -1.51
UBR1-207	ENST00000568782	ORMDL1	Q9P0S3	153 aa		5.63	□□□□□ -1.51
UBR1-207	ENST00000568782		Q6Q795	121 aa		5.62	□□□□□ -1.51
UBR1-207	ENST00000568782	TMEM256-PLSCR3	K7ERE1	68 aa		5.61	□□□□□ -1.51
UBR1-207	ENST00000568782	SCGB1C2	P0DMR2	95 aa		5.61	□□□□□ -1.51
UBR1-207	ENST00000568782	LCE2A	Q5TA79	106 aa	Predicted RBP	5.61	□□□□□ -1.51
UBR1-207	ENST00000568782	MUC17	Q685J3	4493 aa		5.61	□□□□□ -1.51
UBR1-207	ENST00000568782	RPL37	P61927	97 aa	Known RBP	5.6	□□□□□ -1.51
UBR1-207	ENST00000568782	ANKRD29	Q8N6D5	301 aa		5.6	□□□□□ -1.51
UBR1-207	ENST00000568782	ATP11AUN	Q6ZP68	121 aa		5.59	□□□□□ -1.51
UBR1-207	ENST00000568782	KRTAP4-1	Q9BYQ7	146 aa		5.59	□□□□□ -1.51
UBR1-207	ENST00000568782		A0A087WSZ3	146 aa		5.58	□□□□□ -1.52
UBR1-207	ENST00000568782		K7ERJ3	54 aa		5.58	□□□□□ -1.52
UBR1-207	ENST00000568782	OBSCN-AS1	Q96MR7	158 aa		5.58	□□□□□ -1.52
UBR1-207	ENST00000568782		Q96NJ1	140 aa		5.56	□□□□□ -1.52
UBR1-207	ENST00000568782	TRBV7-4	A0A0J9YYF1	115 aa		5.54	□□□□□ -1.52
UBR1-207	ENST00000568782		A0A1B0GV72	72 aa		5.54	□□□□□ -1.52
UBR1-207	ENST00000568782		M0R143	59 aa		5.54	□□□□□ -1.52
UBR1-207	ENST00000568782	TRAC	P01848	142 aa		5.54	□□□□□ -1.52
UBR1-207	ENST00000568782	UBE2V1	Q13404	147 aa		5.54	□□□□□ -1.52
UBR1-207	ENST00000568782	COX6B2	Q6YFQ2	88 aa		5.54	□□□□□ -1.52
UBR1-207	ENST00000568782	FAT4	Q6V0I7	4981 aa		5.53	□□□□□ -1.52
UBR1-207	ENST00000568782	CCK	P06307	115 aa		5.53	□□□□□ -1.52
UBR1-207	ENST00000568782		Q75L30	129 aa		5.53	□□□□□ -1.52
UBR1-207	ENST00000568782	DSCR8	Q96T75	97 aa		5.53	□□□□□ -1.52
UBR1-207	ENST00000568782	SIGMAR1	Q99720	223 aa		5.53	□□□□□ -1.52
UBR1-207	ENST00000568782	RBM3	P98179	157 aa	Known RBP	5.52	□□□□□ -1.53
UBR1-207	ENST00000568782	VPS25	Q9BRG1	176 aa		5.52	□□□□□ -1.53
UBR1-207	ENST00000568782		A0A1W2PNM2	257 aa		5.51	□□□□□ -1.53
UBR1-207	ENST00000568782	IGKV4-1	P06312	121 aa		5.51	□□□□□ -1.53
UBR1-207	ENST00000568782	C21orf62-AS1	Q17RA5	79 aa		5.51	□□□□□ -1.53
UBR1-207	ENST00000568782	BAALC-AS2	P0C853	105 aa		5.49	□□□□□ -1.53
UBR1-207	ENST00000568782	LINC00313	P59037	77 aa		5.49	□□□□□ -1.53
UBR1-207	ENST00000568782	KRTAP9-2	Q9BYQ4	174 aa		5.49	□□□□□ -1.53
UBR1-207	ENST00000568782		C9JAW5	83 aa		5.48	□□□□□ -1.53
UBR1-207	ENST00000568782		M0R2T5	61 aa		5.48	□□□□□ -1.53
UBR1-207	ENST00000568782	SMIM6	P0DI80	62 aa		5.48	□□□□□ -1.53
UBR1-207	ENST00000568782	ATXN8	Q156A1	80 aa		5.48	□□□□□ -1.53
UBR1-207	ENST00000568782	LYRM7	Q5U5X0	104 aa		5.48	□□□□□ -1.53
UBR1-207	ENST00000568782	TRBV20-1	A0A075B6N2	111 aa		5.47	□□□□□ -1.53
UBR1-207	ENST00000568782	TSTD3	H0UI37	97 aa		5.47	□□□□□ -1.53
UBR1-207	ENST00000568782	JMJD7-PLA2G4B	H0Y9G9	81 aa		5.46	□□□□□ -1.54
UBR1-207	ENST00000568782	DSCR10	P59022	87 aa		5.46	□□□□□ -1.54
UBR1-207	ENST00000568782	C20orf166-AS1	Q96NR2	134 aa		5.46	□□□□□ -1.54
UBR1-207	ENST00000568782		A8MUU9	505 aa		5.44	□□□□□ -1.54
UBR1-207	ENST00000568782	DEFB116	Q30KQ4	102 aa		5.44	□□□□□ -1.54
UBR1-207	ENST00000568782	IGHV6-1	A0A0B4J1U7	121 aa		5.43	□□□□□ -1.54
UBR1-207	ENST00000568782		J3KT08	172 aa		5.43	□□□□□ -1.54
UBR1-207	ENST00000568782	LCE2C	Q5TA81	110 aa		5.43	□□□□□ -1.54
UBR1-207	ENST00000568782	NDUFB1	O75438	58 aa		5.42	□□□□□ -1.54
UBR1-207	ENST00000568782	PDE6G	P18545	87 aa		5.42	□□□□□ -1.54
UBR1-207	ENST00000568782	MT1H	P80294	61 aa		5.42	□□□□□ -1.54
UBR1-207	ENST00000568782	LINC00472	Q9H8W2	130 aa		5.42	□□□□□ -1.54
UBR1-207	ENST00000568782		A0A1B0GW54	56 aa		5.41	□□□□□ -1.54
UBR1-207	ENST00000568782	C8orf87	E5RJ46	101 aa		5.41	□□□□□ -1.54
UBR1-207	ENST00000568782	BATF	Q16520	125 aa		5.41	□□□□□ -1.54

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