RNA–Protein interactions for RNA: ENST00000568515.1

DENND4A-208, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 2,655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-208ENST00000568515 NDUFB1O75438 58 aa13.51□□□□□ -0.25
DENND4A-208ENST00000568515 C16orf90A8MZG2 172 aa13.5□□□□□ -0.25
DENND4A-208ENST00000568515 MP68P56378 58 aa13.5□□□□□ -0.25
DENND4A-208ENST00000568515 RPL37AP61513 92 aaKnown RBP13.5□□□□□ -0.25
DENND4A-208ENST00000568515 DNAH3Q8TD57 4116 aa13.5□□□□□ -0.25
DENND4A-208ENST00000568515 UBE2AP49459 152 aa13.48□□□□□ -0.25
DENND4A-208ENST00000568515 KRTAP29-1A8MX34 341 aaPredicted RBP13.47□□□□□ -0.25
DENND4A-208ENST00000568515 KRTAP24-1Q3LI83 254 aa13.47□□□□□ -0.25
DENND4A-208ENST00000568515 TRAV22A0A0B4J277 110 aa13.46□□□□□ -0.25
DENND4A-208ENST00000568515 MAST4O15021 2626 aa13.46□□□□□ -0.26
DENND4A-208ENST00000568515 LINC00208Q96KT6 92 aa13.45□□□□□ -0.26
DENND4A-208ENST00000568515 STAB1Q9NY15 2570 aa13.44□□□□□ -0.26
DENND4A-208ENST00000568515 CNBPP62633 177 aaKnown RBP13.44□□□□□ -0.26
DENND4A-208ENST00000568515 C1orf195Q5TG92 126 aa13.42□□□□□ -0.26
DENND4A-208ENST00000568515 PRB2P02812 416 aaPredicted RBP13.42□□□□□ -0.26
DENND4A-208ENST00000568515 CASC2Q6XLA1 102 aa13.41□□□□□ -0.26
DENND4A-208ENST00000568515 NOTCH1P46531 2555 aa13.41□□□□□ -0.26
DENND4A-208ENST00000568515 PRR15Q8IV56 129 aa13.4□□□□□ -0.26
DENND4A-208ENST00000568515 KRTAP1-5Q9BYS1 174 aa13.4□□□□□ -0.26
DENND4A-208ENST00000568515 PSPHP1O15172 72 aa13.39□□□□□ -0.27
DENND4A-208ENST00000568515 KRTAP11-1Q8IUC1 163 aa13.39□□□□□ -0.27
DENND4A-208ENST00000568515 H0Y9P7 68 aa13.38□□□□□ -0.27
DENND4A-208ENST00000568515 SPRR1BP22528 89 aa13.38□□□□□ -0.27
DENND4A-208ENST00000568515 B9D2Q9BPU9 175 aa13.38□□□□□ -0.27
DENND4A-208ENST00000568515 PHF5AQ7RTV0 110 aaKnown RBP13.37□□□□□ -0.27
DENND4A-208ENST00000568515 LINC00472Q9H8W2 130 aa13.36□□□□□ -0.27
DENND4A-208ENST00000568515 A8MWP4 228 aa13.36□□□□□ -0.27
DENND4A-208ENST00000568515 H3BPC8 53 aa13.36□□□□□ -0.27
DENND4A-208ENST00000568515 FBN1P35555 2871 aaKnown RBP13.36□□□□□ -0.27
DENND4A-208ENST00000568515 H0Y9J4 135 aa13.35□□□□□ -0.27
DENND4A-208ENST00000568515 DNAH10Q8IVF4 4471 aa13.35□□□□□ -0.27
DENND4A-208ENST00000568515 CHTF8P0CG12 524 aa13.34□□□□□ -0.27
DENND4A-208ENST00000568515 HUWE1Q7Z6Z7 4374 aaKnown RBP13.34□□□□□ -0.27
DENND4A-208ENST00000568515 SPANXA2-OT1Q8N9U9 137 aa13.34□□□□□ -0.27
DENND4A-208ENST00000568515 SRRM2Q9UQ35 2752 aaKnown RBP13.31□□□□□ -0.28
DENND4A-208ENST00000568515 V9GYY9 64 aa13.31□□□□□ -0.28
DENND4A-208ENST00000568515 A8MUN3 132 aa13.28□□□□□ -0.28
DENND4A-208ENST00000568515 K7EIL1 84 aa13.27□□□□□ -0.28
DENND4A-208ENST00000568515 NBEAL1Q6ZS30 2694 aa13.27□□□□□ -0.29
DENND4A-208ENST00000568515 C14orf177Q52M58 125 aa13.26□□□□□ -0.29
DENND4A-208ENST00000568515 C9orf163Q8N9P6 203 aa13.25□□□□□ -0.29
DENND4A-208ENST00000568515 MMP24-AS1A0A0U1RRL7 71 aa13.23□□□□□ -0.29
DENND4A-208ENST00000568515 COL6A5A8TX70 2615 aa13.22□□□□□ -0.29
DENND4A-208ENST00000568515 UBE2DNLQ8IWF7 75 aa13.21□□□□□ -0.29
DENND4A-208ENST00000568515 LYSTQ99698 3801 aa13.21□□□□□ -0.29
DENND4A-208ENST00000568515 DNAH9Q9NYC9 4486 aa13.21□□□□□ -0.3
DENND4A-208ENST00000568515 Q5VV11 94 aa13.19□□□□□ -0.3
DENND4A-208ENST00000568515 Q8N9P0 234 aaPredicted RBP13.19□□□□□ -0.3
DENND4A-208ENST00000568515 KRTAP13-1Q8IUC0 172 aa13.16□□□□□ -0.3
DENND4A-208ENST00000568515 LIMD2Q9BT23 127 aa13.15□□□□□ -0.3
DENND4A-208ENST00000568515 APLNQ9ULZ1 77 aa13.14□□□□□ -0.31
DENND4A-208ENST00000568515 IGLV7-46A0A075B6I9 117 aa13.12□□□□□ -0.31
DENND4A-208ENST00000568515 PANO1I0J062 215 aa13.11□□□□□ -0.31
DENND4A-208ENST00000568515 Q96NJ1 140 aa13.11□□□□□ -0.31
DENND4A-208ENST00000568515 PMAIP1Q13794 54 aa13.09□□□□□ -0.31
DENND4A-208ENST00000568515 ASB16-AS1Q495Z4 193 aa13.09□□□□□ -0.31
DENND4A-208ENST00000568515 COA5Q86WW8 74 aa13.09□□□□□ -0.31
DENND4A-208ENST00000568515 IGLV9-49A0A0B4J1Y8 123 aa13.08□□□□□ -0.31
DENND4A-208ENST00000568515 A8MU10 97 aa13.08□□□□□ -0.32
DENND4A-208ENST00000568515 CHKB-CPT1BH3BT56 60 aa13.08□□□□□ -0.32
DENND4A-208ENST00000568515 PRR15LQ9BU68 103 aa13.08□□□□□ -0.32
DENND4A-208ENST00000568515 TP53AIP1Q9HCN2 124 aa13.07□□□□□ -0.32
DENND4A-208ENST00000568515 STAB2Q8WWQ8 2551 aa13.07□□□□□ -0.32
DENND4A-208ENST00000568515 MOBPQ13875 183 aa13.06□□□□□ -0.32
DENND4A-208ENST00000568515 TENM2Q9NT68 2774 aa13.06□□□□□ -0.32
DENND4A-208ENST00000568515 PCOTHQ58A44 107 aa13.06□□□□□ -0.32
DENND4A-208ENST00000568515 CSMD3Q7Z407 3707 aa13.05□□□□□ -0.32
DENND4A-208ENST00000568515 C8orf17Q9NRJ1 99 aa13.04□□□□□ -0.32
DENND4A-208ENST00000568515 CD164Q04900 197 aa13.02□□□□□ -0.33
DENND4A-208ENST00000568515 Q6ZR54 194 aa13.01□□□□□ -0.33
DENND4A-208ENST00000568515 COL7A1Q02388 2944 aa13□□□□□ -0.33
DENND4A-208ENST00000568515 NBDYA0A0U1RRE5 68 aa12.99□□□□□ -0.33
DENND4A-208ENST00000568515 LINC00483Q53H64 154 aa12.99□□□□□ -0.33
DENND4A-208ENST00000568515 LOC101927531A0A1B0GV80 90 aa12.98□□□□□ -0.33
DENND4A-208ENST00000568515 SEC61GP60059 68 aa12.98□□□□□ -0.33
DENND4A-208ENST00000568515 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.98□□□□□ -0.33
DENND4A-208ENST00000568515 Q6ZRN7 208 aaPredicted RBP12.97□□□□□ -0.33
DENND4A-208ENST00000568515 Q75L30 129 aa12.97□□□□□ -0.33
DENND4A-208ENST00000568515 DNAH7Q8WXX0 4024 aa12.97□□□□□ -0.33
DENND4A-208ENST00000568515 IGHV6-1A0A0B4J1U7 121 aa12.96□□□□□ -0.33
DENND4A-208ENST00000568515 A0A1B0GVX0 72 aa12.96□□□□□ -0.33
DENND4A-208ENST00000568515 SPACA4Q8TDM5 124 aa12.96□□□□□ -0.33
DENND4A-208ENST00000568515 DYNC2H1Q8NCM8 4307 aaKnown RBP12.95□□□□□ -0.34
DENND4A-208ENST00000568515 NDUFS5O43920 106 aa12.95□□□□□ -0.34
DENND4A-208ENST00000568515 MGAM2Q2M2H8 2515 aa12.94□□□□□ -0.34
DENND4A-208ENST00000568515 CDK2AP2O75956 126 aa12.91□□□□□ -0.34
DENND4A-208ENST00000568515 WWC2-AS2Q96NR7 200 aa12.91□□□□□ -0.34
DENND4A-208ENST00000568515 MRPL34Q9BQ48 92 aaKnown RBP12.9□□□□□ -0.34
DENND4A-208ENST00000568515 ZNF706Q9Y5V0 76 aaPredicted RBP12.9□□□□□ -0.34
DENND4A-208ENST00000568515 LCA10Q71F78 164 aa12.9□□□□□ -0.34
DENND4A-208ENST00000568515 A6NED7 52 aa12.89□□□□□ -0.35
DENND4A-208ENST00000568515 MDFIQ99750 246 aa12.87□□□□□ -0.35
DENND4A-208ENST00000568515 LINC01558Q9Y6Z2 57 aa12.86□□□□□ -0.35
DENND4A-208ENST00000568515 SPAG11AQ6PDA7 123 aa12.86□□□□□ -0.35
DENND4A-208ENST00000568515 A0A087X002 238 aa12.85□□□□□ -0.35
DENND4A-208ENST00000568515 NOTCH2NLQ7Z3S9 236 aa12.85□□□□□ -0.35
DENND4A-208ENST00000568515 ANAPC11Q9NYG5 84 aa12.85□□□□□ -0.35
DENND4A-208ENST00000568515 SPTSSBQ8NFR3 76 aa12.84□□□□□ -0.35
DENND4A-208ENST00000568515 PSORS1C2Q9UIG4 136 aa12.84□□□□□ -0.35
DENND4A-208ENST00000568515 HRES1P13985 223 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 788 ms