RNA–Protein interactions for RNA: ENST00000567992.1

CLK3-220, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-220ENST00000567992 MTURNQ8N3F0 131 aa5.74□□□□□ -1.49
CLK3-220ENST00000567992 COPS9Q8WXC6 57 aa5.74□□□□□ -1.49
CLK3-220ENST00000567992 SCGB1C2P0DMR2 95 aa5.73□□□□□ -1.49
CLK3-220ENST00000567992 LINC00483Q53H64 154 aa5.73□□□□□ -1.49
CLK3-220ENST00000567992 C3orf22Q8N5N4 141 aa5.73□□□□□ -1.49
CLK3-220ENST00000567992 OR13C6PQ8NH95 151 aa5.73□□□□□ -1.49
CLK3-220ENST00000567992 TYMSOSQ8TAI1 123 aa5.73□□□□□ -1.49
CLK3-220ENST00000567992 ZNF706Q9Y5V0 76 aaPredicted RBP5.73□□□□□ -1.49
CLK3-220ENST00000567992 ATXN8Q156A1 80 aa5.71□□□□□ -1.5
CLK3-220ENST00000567992 C6orf99Q4VX62 202 aa5.71□□□□□ -1.5
CLK3-220ENST00000567992 TEN1Q86WV5 123 aa5.71□□□□□ -1.5
CLK3-220ENST00000567992 PPDPFLQ8WWR9 84 aa5.71□□□□□ -1.5
CLK3-220ENST00000567992 ELOF1P60002 83 aaKnown RBP5.7□□□□□ -1.5
CLK3-220ENST00000567992 C21orf62-AS1Q17RA5 79 aa5.7□□□□□ -1.5
CLK3-220ENST00000567992 Q1RN00 199 aa5.7□□□□□ -1.5
CLK3-220ENST00000567992 TRIAP1O43715 76 aa5.69□□□□□ -1.5
CLK3-220ENST00000567992 COX6CP09669 75 aa5.69□□□□□ -1.5
CLK3-220ENST00000567992 GAGE2AQ6NT46 116 aa5.69□□□□□ -1.5
CLK3-220ENST00000567992 ST20-AS1Q8NBB2 130 aa5.69□□□□□ -1.5
CLK3-220ENST00000567992 TRBV7-6A0A0J9YX20 115 aa5.68□□□□□ -1.5
CLK3-220ENST00000567992 H7C2G1 150 aa5.68□□□□□ -1.5
CLK3-220ENST00000567992 SLC25A20O43772 301 aa5.68□□□□□ -1.5
CLK3-220ENST00000567992 COX7BP24311 80 aa5.68□□□□□ -1.5
CLK3-220ENST00000567992 LINC00304Q8N9R0 145 aa5.68□□□□□ -1.5
CLK3-220ENST00000567992 TRAV13-2A0A0B4J235 113 aa5.67□□□□□ -1.5
CLK3-220ENST00000567992 C9JAW5 83 aa5.67□□□□□ -1.5
CLK3-220ENST00000567992 ANKRD29Q8N6D5 301 aa5.67□□□□□ -1.5
CLK3-220ENST00000567992 SMIM11BQ8TCY0 68 aa5.67□□□□□ -1.5
CLK3-220ENST00000567992 SIGMAR1Q99720 223 aa5.67□□□□□ -1.5
CLK3-220ENST00000567992 DHRS4-AS1Q9P1J3 65 aa5.67□□□□□ -1.5
CLK3-220ENST00000567992 H3BT86 120 aa5.66□□□□□ -1.5
CLK3-220ENST00000567992 LST1O00453 97 aa5.66□□□□□ -1.5
CLK3-220ENST00000567992 SPRR1BP22528 89 aa5.66□□□□□ -1.5
CLK3-220ENST00000567992 A0A1B0GV72 72 aa5.65□□□□□ -1.5
CLK3-220ENST00000567992 Q8NBF4 154 aa5.65□□□□□ -1.5
CLK3-220ENST00000567992 RNF213Q63HN8 5207 aa5.65□□□□□ -1.51
CLK3-220ENST00000567992 MOBPQ13875 183 aa5.64□□□□□ -1.51
CLK3-220ENST00000567992 XP32Q5T750 250 aa5.64□□□□□ -1.51
CLK3-220ENST00000567992 IGLV9-49A0A0B4J1Y8 123 aa5.63□□□□□ -1.51
CLK3-220ENST00000567992 LINC01547P58512 204 aaPredicted RBP5.63□□□□□ -1.51
CLK3-220ENST00000567992 CDIP1Q9H305 208 aa5.63□□□□□ -1.51
CLK3-220ENST00000567992 IGLV5-48A0A075B6I7 105 aa5.61□□□□□ -1.51
CLK3-220ENST00000567992 TRACP01848 142 aa5.61□□□□□ -1.51
CLK3-220ENST00000567992 PRR4Q16378 134 aa5.61□□□□□ -1.51
CLK3-220ENST00000567992 SPAG11AQ6PDA7 123 aa5.61□□□□□ -1.51
CLK3-220ENST00000567992 SVIPQ8NHG7 77 aa5.61□□□□□ -1.51
CLK3-220ENST00000567992 CLEC2BQ92478 149 aa5.61□□□□□ -1.51
CLK3-220ENST00000567992 RETNLBQ9BQ08 111 aa5.61□□□□□ -1.51
CLK3-220ENST00000567992 SSBP3-AS1Q7Z2R9 100 aa5.6□□□□□ -1.51
CLK3-220ENST00000567992 SMIM29Q86T20 159 aa5.6□□□□□ -1.51
CLK3-220ENST00000567992 C9orf153Q5TBE3 101 aa5.59□□□□□ -1.51
CLK3-220ENST00000567992 LINC00575Q6W349 94 aa5.59□□□□□ -1.51
CLK3-220ENST00000567992 TEX49A0A1B0GTD5 131 aa5.58□□□□□ -1.52
CLK3-220ENST00000567992 FAM240AA0A1B0GVK7 77 aa5.58□□□□□ -1.52
CLK3-220ENST00000567992 DEFB105AQ8NG35 78 aa5.58□□□□□ -1.52
CLK3-220ENST00000567992 MUC17Q685J3 4493 aa5.58□□□□□ -1.52
CLK3-220ENST00000567992 H0YGX0 51 aa5.57□□□□□ -1.52
CLK3-220ENST00000567992 SPINK1P00995 79 aa5.57□□□□□ -1.52
CLK3-220ENST00000567992 RPS29P62273 56 aaKnown RBP5.57□□□□□ -1.52
CLK3-220ENST00000567992 Q8N377 158 aa5.57□□□□□ -1.52
CLK3-220ENST00000567992 KRTAP4-8Q9BYQ9 185 aa5.56□□□□□ -1.52
CLK3-220ENST00000567992 LAMTOR3Q9UHA4 124 aa5.56□□□□□ -1.52
CLK3-220ENST00000567992 hADV29S1A0JD25 119 aa5.55□□□□□ -1.52
CLK3-220ENST00000567992 MT-ATP8P03928 68 aa5.55□□□□□ -1.52
CLK3-220ENST00000567992 Q6ZQY7 126 aa5.55□□□□□ -1.52
CLK3-220ENST00000567992 FAM218AQ96MZ4 157 aa5.55□□□□□ -1.52
CLK3-220ENST00000567992 ACYP1P07311 99 aa5.54□□□□□ -1.52
CLK3-220ENST00000567992 BAALC-AS2P0C853 105 aa5.54□□□□□ -1.52
CLK3-220ENST00000567992 Q6Q795 121 aa5.53□□□□□ -1.52
CLK3-220ENST00000567992 IGLV7-46A0A075B6I9 117 aa5.52□□□□□ -1.53
CLK3-220ENST00000567992 A0A0G2JQZ4 141 aa5.52□□□□□ -1.53
CLK3-220ENST00000567992 A0A1B0GX51 115 aa5.52□□□□□ -1.53
CLK3-220ENST00000567992 TPRXLQ17RH7 258 aa5.52□□□□□ -1.53
CLK3-220ENST00000567992 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.52□□□□□ -1.53
CLK3-220ENST00000567992 FP248Q71RG6 208 aaPredicted RBP5.52□□□□□ -1.53
CLK3-220ENST00000567992 MUC2Q02817 5179 aa5.52□□□□□ -1.53
CLK3-220ENST00000567992 SNCGO76070 127 aa5.51□□□□□ -1.53
CLK3-220ENST00000567992 DNAL4O96015 105 aa5.5□□□□□ -1.53
CLK3-220ENST00000567992 CD164Q04900 197 aa5.5□□□□□ -1.53
CLK3-220ENST00000567992 HRCT1Q6UXD1 115 aa5.5□□□□□ -1.53
CLK3-220ENST00000567992 IGLV8-61A0A075B6I0 122 aa5.49□□□□□ -1.53
CLK3-220ENST00000567992 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.49□□□□□ -1.53
CLK3-220ENST00000567992 OBSCN-AS1Q96MR7 158 aa5.49□□□□□ -1.53
CLK3-220ENST00000567992 KRTAP13-3Q3SY46 172 aa5.48□□□□□ -1.53
CLK3-220ENST00000567992 LIMD2Q9BT23 127 aa5.47□□□□□ -1.53
CLK3-220ENST00000567992 KRTAP9-2Q9BYQ4 174 aa5.47□□□□□ -1.53
CLK3-220ENST00000567992 TRBV7-7A0A0K0K1E9 115 aa5.46□□□□□ -1.54
CLK3-220ENST00000567992 F8WEM9 126 aa5.46□□□□□ -1.54
CLK3-220ENST00000567992 Q5XG85 94 aa5.46□□□□□ -1.54
CLK3-220ENST00000567992 IGFL1Q6UW32 110 aa5.46□□□□□ -1.54
CLK3-220ENST00000567992 LINC00643Q86TS7 51 aa5.46□□□□□ -1.54
CLK3-220ENST00000567992 IMUPQ9GZP8 106 aa5.46□□□□□ -1.54
CLK3-220ENST00000567992 ORMDL1Q9P0S3 153 aa5.46□□□□□ -1.54
CLK3-220ENST00000567992 KRTAP9-6A0A140TA67 174 aa5.45□□□□□ -1.54
CLK3-220ENST00000567992 Q6JHZ5 121 aa5.44□□□□□ -1.54
CLK3-220ENST00000567992 H3BQ85 93 aa5.43□□□□□ -1.54
CLK3-220ENST00000567992 TMEM256-PLSCR3K7ERE1 68 aa5.43□□□□□ -1.54
CLK3-220ENST00000567992 JMJD7-PLA2G4BH0Y9G9 81 aa5.42□□□□□ -1.54
CLK3-220ENST00000567992 NDUFV3P56181 108 aaKnown RBP5.42□□□□□ -1.54
CLK3-220ENST00000567992 C1orf195Q5TG92 126 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms