RNA–Protein interactions for RNA: ENST00000567399.5

COMMD4-219, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-219ENST00000567399 LINC01547P58512 204 aaPredicted RBP8.76□□□□□ -1.01
COMMD4-219ENST00000567399 SCGB1C2P0DMR2 95 aa8.74□□□□□ -1.01
COMMD4-219ENST00000567399 SMIM29Q86T20 159 aa8.74□□□□□ -1.01
COMMD4-219ENST00000567399 SNHG12Q9BXW3 62 aa8.74□□□□□ -1.01
COMMD4-219ENST00000567399 GHRHP01286 108 aa8.73□□□□□ -1.01
COMMD4-219ENST00000567399 HRCT1Q6UXD1 115 aa8.73□□□□□ -1.01
COMMD4-219ENST00000567399 RETNLBQ9BQ08 111 aa8.73□□□□□ -1.01
COMMD4-219ENST00000567399 A0A1B0GX51 115 aa8.72□□□□□ -1.01
COMMD4-219ENST00000567399 OCIAD2Q56VL3 154 aa8.72□□□□□ -1.01
COMMD4-219ENST00000567399 FAM218AQ96MZ4 157 aa8.72□□□□□ -1.01
COMMD4-219ENST00000567399 DNAL4O96015 105 aa8.71□□□□□ -1.02
COMMD4-219ENST00000567399 PPDPFLQ8WWR9 84 aa8.71□□□□□ -1.02
COMMD4-219ENST00000567399 CLEC2BQ92478 149 aa8.71□□□□□ -1.02
COMMD4-219ENST00000567399 BATFQ16520 125 aa8.7□□□□□ -1.02
COMMD4-219ENST00000567399 FABP2P12104 132 aa8.68□□□□□ -1.02
COMMD4-219ENST00000567399 RPS29P62273 56 aaKnown RBP8.67□□□□□ -1.02
COMMD4-219ENST00000567399 LIMD2Q9BT23 127 aa8.67□□□□□ -1.02
COMMD4-219ENST00000567399 CD164Q04900 197 aa8.65□□□□□ -1.02
COMMD4-219ENST00000567399 Q6JHZ5 121 aa8.65□□□□□ -1.02
COMMD4-219ENST00000567399 IGLV7-46A0A075B6I9 117 aa8.64□□□□□ -1.03
COMMD4-219ENST00000567399 A0A0G2JQZ4 141 aa8.64□□□□□ -1.03
COMMD4-219ENST00000567399 ORMDL1Q9P0S3 153 aa8.64□□□□□ -1.03
COMMD4-219ENST00000567399 H3BQ85 93 aa8.63□□□□□ -1.03
COMMD4-219ENST00000567399 NDUFV3P56181 108 aaKnown RBP8.63□□□□□ -1.03
COMMD4-219ENST00000567399 FP248Q71RG6 208 aaPredicted RBP8.61□□□□□ -1.03
COMMD4-219ENST00000567399 NAA38Q9BRA0 125 aaKnown RBP8.61□□□□□ -1.03
COMMD4-219ENST00000567399 H3BUT2 72 aa8.6□□□□□ -1.03
COMMD4-219ENST00000567399 IGLV8-61A0A075B6I0 122 aa8.59□□□□□ -1.03
COMMD4-219ENST00000567399 H3BMG7 143 aa8.59□□□□□ -1.03
COMMD4-219ENST00000567399 TMEM256-PLSCR3K7ERE1 68 aa8.59□□□□□ -1.03
COMMD4-219ENST00000567399 TRACP01848 142 aa8.59□□□□□ -1.03
COMMD4-219ENST00000567399 IGFL1Q6UW32 110 aa8.59□□□□□ -1.03
COMMD4-219ENST00000567399 LST1O00453 97 aa8.58□□□□□ -1.04
COMMD4-219ENST00000567399 LYRM7Q5U5X0 104 aa8.58□□□□□ -1.04
COMMD4-219ENST00000567399 TCL1BO95988 128 aa8.57□□□□□ -1.04
COMMD4-219ENST00000567399 ATXN8Q156A1 80 aa8.57□□□□□ -1.04
COMMD4-219ENST00000567399 HMCN2Q8NDA2 5059 aa8.57□□□□□ -1.04
COMMD4-219ENST00000567399 CDIP1Q9H305 208 aa8.56□□□□□ -1.04
COMMD4-219ENST00000567399 A0A1B0GV72 72 aa8.55□□□□□ -1.04
COMMD4-219ENST00000567399 TRBV7-7A0A0K0K1E9 115 aa8.53□□□□□ -1.04
COMMD4-219ENST00000567399 BAALC-AS2P0C853 105 aa8.53□□□□□ -1.04
COMMD4-219ENST00000567399 TPRXLQ17RH7 258 aa8.53□□□□□ -1.04
COMMD4-219ENST00000567399 UBE2V1Q13404 147 aa8.52□□□□□ -1.05
COMMD4-219ENST00000567399 Q5XG85 94 aa8.52□□□□□ -1.05
COMMD4-219ENST00000567399 ANKRD29Q8N6D5 301 aa8.52□□□□□ -1.05
COMMD4-219ENST00000567399 C9orf118A6NHY6 69 aa8.51□□□□□ -1.05
COMMD4-219ENST00000567399 TRBV20-1A0A075B6N2 111 aa8.5□□□□□ -1.05
COMMD4-219ENST00000567399 TEN1Q86WV5 123 aa8.5□□□□□ -1.05
COMMD4-219ENST00000567399 PCP4L1A6NKN8 68 aa8.49□□□□□ -1.05
COMMD4-219ENST00000567399 TAX1BP3O14907 124 aa8.48□□□□□ -1.05
COMMD4-219ENST00000567399 C1orf195Q5TG92 126 aa8.47□□□□□ -1.05
COMMD4-219ENST00000567399 A0A1W2PPM0 123 aa8.46□□□□□ -1.06
COMMD4-219ENST00000567399 RBM3P98179 157 aaKnown RBP8.46□□□□□ -1.06
COMMD4-219ENST00000567399 DSCR8Q96T75 97 aa8.46□□□□□ -1.06
COMMD4-219ENST00000567399 SS18L2Q9UHA2 77 aa8.46□□□□□ -1.06
COMMD4-219ENST00000567399 KRTAP13-3Q3SY46 172 aa8.45□□□□□ -1.06
COMMD4-219ENST00000567399 COL5A1-AS1Q5SY13 56 aa8.45□□□□□ -1.06
COMMD4-219ENST00000567399 Q6Q795 121 aa8.45□□□□□ -1.06
COMMD4-219ENST00000567399 A0A087WSZ3 146 aa8.44□□□□□ -1.06
COMMD4-219ENST00000567399 C9JAW5 83 aa8.44□□□□□ -1.06
COMMD4-219ENST00000567399 LPAP08519 4548 aa8.43□□□□□ -1.06
COMMD4-219ENST00000567399 ASB16-AS1Q495Z4 193 aa8.43□□□□□ -1.06
COMMD4-219ENST00000567399 VPS25Q9BRG1 176 aa8.43□□□□□ -1.06
COMMD4-219ENST00000567399 A0A1W2PNM2 257 aa8.42□□□□□ -1.06
COMMD4-219ENST00000567399 CCKP06307 115 aa8.42□□□□□ -1.06
COMMD4-219ENST00000567399 C9orf92A6NGG3 77 aa8.41□□□□□ -1.06
COMMD4-219ENST00000567399 TRBV7-4A0A0J9YYF1 115 aa8.4□□□□□ -1.06
COMMD4-219ENST00000567399 JMJD7-PLA2G4BH0Y9G9 81 aa8.4□□□□□ -1.06
COMMD4-219ENST00000567399 SPCS1Q9Y6A9 102 aa8.39□□□□□ -1.07
COMMD4-219ENST00000567399 LRP2P98164 4655 aa8.38□□□□□ -1.07
COMMD4-219ENST00000567399 H3BT86 120 aa8.34□□□□□ -1.07
COMMD4-219ENST00000567399 MTURNQ8N3F0 131 aa8.34□□□□□ -1.07
COMMD4-219ENST00000567399 XP32Q5T750 250 aa8.33□□□□□ -1.08
COMMD4-219ENST00000567399 PDE6GP18545 87 aa8.32□□□□□ -1.08
COMMD4-219ENST00000567399 SEC61BP60468 96 aaKnown RBP8.32□□□□□ -1.08
COMMD4-219ENST00000567399 C21orf62-AS1Q17RA5 79 aa8.32□□□□□ -1.08
COMMD4-219ENST00000567399 C14orf132Q9NPU4 83 aa8.32□□□□□ -1.08
COMMD4-219ENST00000567399 UBR4Q5T4S7 5183 aa8.31□□□□□ -1.08
COMMD4-219ENST00000567399 SIGMAR1Q99720 223 aa8.3□□□□□ -1.08
COMMD4-219ENST00000567399 LOC110117498A0A087WWA1 95 aa8.29□□□□□ -1.08
COMMD4-219ENST00000567399 IGKV4-1P06312 121 aa8.29□□□□□ -1.08
COMMD4-219ENST00000567399 Q6ZQT0 140 aa8.29□□□□□ -1.08
COMMD4-219ENST00000567399 K7EP34 96 aa8.27□□□□□ -1.09
COMMD4-219ENST00000567399 DEFB116Q30KQ4 102 aa8.27□□□□□ -1.09
COMMD4-219ENST00000567399 GTF2H5Q6ZYL4 71 aa8.27□□□□□ -1.09
COMMD4-219ENST00000567399 OBSCN-AS1Q96MR7 158 aa8.27□□□□□ -1.09
COMMD4-219ENST00000567399 Q96NJ1 140 aa8.27□□□□□ -1.09
COMMD4-219ENST00000567399 A0A1B0GW54 56 aa8.24□□□□□ -1.09
COMMD4-219ENST00000567399 LINC00472Q9H8W2 130 aa8.23□□□□□ -1.09
COMMD4-219ENST00000567399 PCOTHQ58A44 107 aa8.2□□□□□ -1.1
COMMD4-219ENST00000567399 A0A0U1RQV1 116 aa8.19□□□□□ -1.1
COMMD4-219ENST00000567399 J3KT08 172 aa8.19□□□□□ -1.1
COMMD4-219ENST00000567399 SMCPP49901 116 aaPredicted RBP8.19□□□□□ -1.1
COMMD4-219ENST00000567399 DSCR10P59022 87 aa8.19□□□□□ -1.1
COMMD4-219ENST00000567399 LINC00313P59037 77 aa8.19□□□□□ -1.1
COMMD4-219ENST00000567399 RPL37P61927 97 aaKnown RBP8.19□□□□□ -1.1
COMMD4-219ENST00000567399 NREPQ16612 68 aa8.19□□□□□ -1.1
COMMD4-219ENST00000567399 IGHV6-1A0A0B4J1U7 121 aa8.18□□□□□ -1.1
COMMD4-219ENST00000567399 NDUFB1O75438 58 aa8.16□□□□□ -1.1
COMMD4-219ENST00000567399 PRO0461Q9UI25 63 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms