RNA–Protein interactions for RNA: ENST00000566915.5

LPCAT2-208, Transcript of lysophosphatidylcholine acyltransferase 2, humanhuman

TSL 1 (best)

Gene LPCAT2, Length 5,285 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT2-208ENST00000566915 IGSF10Q6WRI0 2623 aa2.77□□□□□ -1.97
LPCAT2-208ENST00000566915 CHD7Q9P2D1 2997 aa2.77□□□□□ -1.97
LPCAT2-208ENST00000566915 VPS13CQ709C8 3753 aa2.77□□□□□ -1.97
LPCAT2-208ENST00000566915 Q5XG85 94 aa2.77□□□□□ -1.97
LPCAT2-208ENST00000566915 SPINT4Q6UDR6 99 aa2.77□□□□□ -1.97
LPCAT2-208ENST00000566915 LINC00304Q8N9R0 145 aa2.77□□□□□ -1.97
LPCAT2-208ENST00000566915 KMT2BQ9UMN6 2715 aaPredicted RBP2.77□□□□□ -1.97
LPCAT2-208ENST00000566915 J3QL48 77 aa2.76□□□□□ -1.97
LPCAT2-208ENST00000566915 POLQO75417 2590 aa2.76□□□□□ -1.97
LPCAT2-208ENST00000566915 LORP23490 312 aaPredicted RBP2.76□□□□□ -1.97
LPCAT2-208ENST00000566915 FAM229BQ4G0N7 80 aa2.76□□□□□ -1.97
LPCAT2-208ENST00000566915 APLNQ9ULZ1 77 aa2.76□□□□□ -1.97
LPCAT2-208ENST00000566915 A0A1W2PNN7 141 aa2.75□□□□□ -1.97
LPCAT2-208ENST00000566915 ASB16-AS1Q495Z4 193 aa2.75□□□□□ -1.97
LPCAT2-208ENST00000566915 ACANP16112 2415 aa2.75□□□□□ -1.97
LPCAT2-208ENST00000566915 Q8N9P0 234 aaPredicted RBP2.75□□□□□ -1.97
LPCAT2-208ENST00000566915 UNC79Q9P2D8 2635 aa2.75□□□□□ -1.97
LPCAT2-208ENST00000566915 PSORS1C2Q9UIG4 136 aa2.75□□□□□ -1.97
LPCAT2-208ENST00000566915 C5orf42Q9H799 3197 aa2.74□□□□□ -1.97
LPCAT2-208ENST00000566915 CHD6Q8TD26 2715 aa2.74□□□□□ -1.97
LPCAT2-208ENST00000566915 FP248Q71RG6 208 aaPredicted RBP2.74□□□□□ -1.97
LPCAT2-208ENST00000566915 CFAP46Q8IYW2 2715 aa2.73□□□□□ -1.97
LPCAT2-208ENST00000566915 AKAP9Q99996 3911 aa2.73□□□□□ -1.97
LPCAT2-208ENST00000566915 MMP24-AS1A0A0U1RRL7 71 aa2.73□□□□□ -1.97
LPCAT2-208ENST00000566915 LINC00472Q9H8W2 130 aa2.72□□□□□ -1.97
LPCAT2-208ENST00000566915 FREM2Q5SZK8 3169 aa2.71□□□□□ -1.97
LPCAT2-208ENST00000566915 ITPR3Q14573 2671 aa2.71□□□□□ -1.98
LPCAT2-208ENST00000566915 GCN1Q92616 2671 aaKnown RBP2.71□□□□□ -1.98
LPCAT2-208ENST00000566915 FLNAP21333 2647 aaKnown RBP2.7□□□□□ -1.98
LPCAT2-208ENST00000566915 RBM12B-AS1Q9P1G2 102 aa2.7□□□□□ -1.98
LPCAT2-208ENST00000566915 H3BS24 57 aa2.7□□□□□ -1.98
LPCAT2-208ENST00000566915 HRES1P13985 223 aa2.7□□□□□ -1.98
LPCAT2-208ENST00000566915 TNP2Q05952 138 aa2.7□□□□□ -1.98
LPCAT2-208ENST00000566915 LINC01554Q52M75 96 aa2.7□□□□□ -1.98
LPCAT2-208ENST00000566915 PRR26Q8N8Z3 221 aa2.7□□□□□ -1.98
LPCAT2-208ENST00000566915 Q5VV11 94 aa2.7□□□□□ -1.98
LPCAT2-208ENST00000566915 PLAC8Q9NZF1 115 aa2.7□□□□□ -1.98
LPCAT2-208ENST00000566915 A0A0G2JQZ4 141 aa2.69□□□□□ -1.98
LPCAT2-208ENST00000566915 A0A1B0GU33 70 aa2.69□□□□□ -1.98
LPCAT2-208ENST00000566915 CELSR3Q9NYQ7 3312 aa2.69□□□□□ -1.98
LPCAT2-208ENST00000566915 DMAC1Q96GE9 116 aa2.69□□□□□ -1.98
LPCAT2-208ENST00000566915 LAMA1P25391 3075 aa2.68□□□□□ -1.98
LPCAT2-208ENST00000566915 CYSTM1Q9H1C7 97 aa2.68□□□□□ -1.98
LPCAT2-208ENST00000566915 Q6ZR54 194 aa2.68□□□□□ -1.98
LPCAT2-208ENST00000566915 Q8NDZ9 215 aa2.68□□□□□ -1.98
LPCAT2-208ENST00000566915 KRTAP26-1Q6PEX3 210 aa2.67□□□□□ -1.98
LPCAT2-208ENST00000566915 ZCCHC13Q8WW36 166 aaKnown RBP2.67□□□□□ -1.98
LPCAT2-208ENST00000566915 LAMA5O15230 3695 aa2.67□□□□□ -1.98
LPCAT2-208ENST00000566915 AKAP13Q12802 2813 aa2.67□□□□□ -1.98
LPCAT2-208ENST00000566915 LUZP6Q538Z0 58 aa2.66□□□□□ -1.98
LPCAT2-208ENST00000566915 LINC00483Q53H64 154 aa2.66□□□□□ -1.98
LPCAT2-208ENST00000566915 CFAP47Q6ZTR5 3102 aa2.66□□□□□ -1.98
LPCAT2-208ENST00000566915 VPS13AQ96RL7 3174 aa2.66□□□□□ -1.98
LPCAT2-208ENST00000566915 KRTAP29-1A8MX34 341 aaPredicted RBP2.66□□□□□ -1.98
LPCAT2-208ENST00000566915 KRTAP4-16G5E9R7 235 aaPredicted RBP2.66□□□□□ -1.98
LPCAT2-208ENST00000566915 A0A087X002 238 aa2.65□□□□□ -1.98
LPCAT2-208ENST00000566915 Q5W150 140 aa2.65□□□□□ -1.98
LPCAT2-208ENST00000566915 Q8N1X5 172 aa2.65□□□□□ -1.98
LPCAT2-208ENST00000566915 COL6A3P12111 3177 aa2.65□□□□□ -1.99
LPCAT2-208ENST00000566915 OXTP01178 125 aa2.65□□□□□ -1.99
LPCAT2-208ENST00000566915 ANAPC11Q9NYG5 84 aa2.65□□□□□ -1.99
LPCAT2-208ENST00000566915 UBR5O95071 2799 aaPredicted RBP2.65□□□□□ -1.99
LPCAT2-208ENST00000566915 MAST4O15021 2626 aa2.65□□□□□ -1.99
LPCAT2-208ENST00000566915 C9orf92A6NGG3 77 aa2.64□□□□□ -1.99
LPCAT2-208ENST00000566915 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.64□□□□□ -1.99
LPCAT2-208ENST00000566915 COX6B2Q6YFQ2 88 aa2.62□□□□□ -1.99
LPCAT2-208ENST00000566915 FRYLO94915 3013 aa2.62□□□□□ -1.99
LPCAT2-208ENST00000566915 SPINK7P58062 85 aa2.62□□□□□ -1.99
LPCAT2-208ENST00000566915 CSAG1Q6PB30 78 aa2.62□□□□□ -1.99
LPCAT2-208ENST00000566915 ATRQ13535 2644 aa2.61□□□□□ -1.99
LPCAT2-208ENST00000566915 SPATA8Q6RVD6 105 aa2.61□□□□□ -1.99
LPCAT2-208ENST00000566915 RPS29P62273 56 aaKnown RBP2.6□□□□□ -1.99
LPCAT2-208ENST00000566915 RPL37P61927 97 aaKnown RBP2.6□□□□□ -1.99
LPCAT2-208ENST00000566915 Q6ZSA8 131 aa2.6□□□□□ -1.99
LPCAT2-208ENST00000566915 ZNF469Q96JG9 3925 aaPredicted RBP2.6□□□□□ -1.99
LPCAT2-208ENST00000566915 WDFY4Q6ZS81 3184 aa2.6□□□□□ -1.99
LPCAT2-208ENST00000566915 A0A0D9SG42 100 aa2.6□□□□□ -1.99
LPCAT2-208ENST00000566915 CSMD1Q96PZ7 3565 aa2.59□□□□□ -1.99
LPCAT2-208ENST00000566915 TEP1Q99973 2627 aaKnown RBP2.59□□□□□ -1.99
LPCAT2-208ENST00000566915 ROMO1P60602 79 aa2.59□□□□□ -2
LPCAT2-208ENST00000566915 S4R3F8 94 aa2.59□□□□□ -2
LPCAT2-208ENST00000566915 FRYQ5TBA9 3013 aa2.58□□□□□ -2
LPCAT2-208ENST00000566915 A0A0A0MQY5 61 aa2.58□□□□□ -2
LPCAT2-208ENST00000566915 CUBNO60494 3623 aa2.58□□□□□ -2
LPCAT2-208ENST00000566915 H1FX-AS1Q4G0G2 97 aa2.58□□□□□ -2
LPCAT2-208ENST00000566915 Q5VSD8 79 aa2.58□□□□□ -2
LPCAT2-208ENST00000566915 DSPP15924 2871 aaKnown RBP2.57□□□□□ -2
LPCAT2-208ENST00000566915 SETXQ7Z333 2677 aaKnown RBP2.57□□□□□ -2
LPCAT2-208ENST00000566915 SMR3BP02814 79 aaPredicted RBP2.57□□□□□ -2
LPCAT2-208ENST00000566915 PRAC1Q96KF2 57 aa2.57□□□□□ -2
LPCAT2-208ENST00000566915 DCHS1Q96JQ0 3298 aa2.57□□□□□ -2
LPCAT2-208ENST00000566915 COL6A5A8TX70 2615 aa2.57□□□□□ -2
LPCAT2-208ENST00000566915 TRIOO75962 3097 aa2.57□□□□□ -2
LPCAT2-208ENST00000566915 A6NN06 94 aa2.56□□□□□ -2
LPCAT2-208ENST00000566915 CAMK2N1Q7Z7J9 78 aa2.56□□□□□ -2
LPCAT2-208ENST00000566915 PRRC2CQ9Y520 2896 aaKnown RBP2.56□□□□□ -2
LPCAT2-208ENST00000566915 HIVEP1P15822 2718 aa2.56□□□□□ -2
LPCAT2-208ENST00000566915 MGAM2Q2M2H8 2515 aa2.56□□□□□ -2
LPCAT2-208ENST00000566915 ASH1LQ9NR48 2969 aaKnown RBP2.56□□□□□ -2
LPCAT2-208ENST00000566915 KRTAP1-5Q9BYS1 174 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms