RNA–Protein interactions for RNA: ENST00000566498.1

CCDC113-204, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-204ENST00000566498 CEND1Q8N111 149 aa10.73□□□□□ -0.69
CCDC113-204ENST00000566498 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.72□□□□□ -0.69
CCDC113-204ENST00000566498 A0A0B4J2C4 111 aa10.71□□□□□ -0.69
CCDC113-204ENST00000566498 SNCGO76070 127 aa10.71□□□□□ -0.69
CCDC113-204ENST00000566498 PYY3Q5JQD4 70 aa10.7□□□□□ -0.7
CCDC113-204ENST00000566498 TMEM238LA0A1B0GVL6 79 aa10.69□□□□□ -0.7
CCDC113-204ENST00000566498 A6NJY4 79 aa10.69□□□□□ -0.7
CCDC113-204ENST00000566498 SNHG12Q9BXW3 62 aa10.69□□□□□ -0.7
CCDC113-204ENST00000566498 SEC61BP60468 96 aaKnown RBP10.68□□□□□ -0.7
CCDC113-204ENST00000566498 H0YGX0 51 aa10.67□□□□□ -0.7
CCDC113-204ENST00000566498 ASB16-AS1Q495Z4 193 aa10.67□□□□□ -0.7
CCDC113-204ENST00000566498 OCIAD2Q56VL3 154 aa10.67□□□□□ -0.7
CCDC113-204ENST00000566498 PRO1854Q9UHT4 67 aa10.67□□□□□ -0.7
CCDC113-204ENST00000566498 Q5XG85 94 aa10.66□□□□□ -0.7
CCDC113-204ENST00000566498 TCL1BO95988 128 aa10.65□□□□□ -0.7
CCDC113-204ENST00000566498 Q6JHZ5 121 aa10.65□□□□□ -0.7
CCDC113-204ENST00000566498 PPDPFLQ8WWR9 84 aa10.65□□□□□ -0.7
CCDC113-204ENST00000566498 MUC17Q685J3 4493 aa10.64□□□□□ -0.71
CCDC113-204ENST00000566498 C9orf92A6NGG3 77 aa10.64□□□□□ -0.71
CCDC113-204ENST00000566498 FXYD2P54710 66 aa10.64□□□□□ -0.71
CCDC113-204ENST00000566498 C1orf195Q5TG92 126 aa10.64□□□□□ -0.71
CCDC113-204ENST00000566498 XP32Q5T750 250 aa10.63□□□□□ -0.71
CCDC113-204ENST00000566498 IGLV8-61A0A075B6I0 122 aa10.61□□□□□ -0.71
CCDC113-204ENST00000566498 IGFL1Q6UW32 110 aa10.61□□□□□ -0.71
CCDC113-204ENST00000566498 CLEC2BQ92478 149 aa10.61□□□□□ -0.71
CCDC113-204ENST00000566498 FAM218AQ96MZ4 157 aa10.6□□□□□ -0.71
CCDC113-204ENST00000566498 HSD52Q0P140 79 aa10.59□□□□□ -0.71
CCDC113-204ENST00000566498 H3BUT2 72 aa10.57□□□□□ -0.72
CCDC113-204ENST00000566498 TRBV7-7A0A0K0K1E9 115 aa10.56□□□□□ -0.72
CCDC113-204ENST00000566498 UQCR10Q9UDW1 63 aa10.56□□□□□ -0.72
CCDC113-204ENST00000566498 GHRHP01286 108 aa10.55□□□□□ -0.72
CCDC113-204ENST00000566498 A0A1B0GX51 115 aa10.54□□□□□ -0.72
CCDC113-204ENST00000566498 TRIAP1O43715 76 aa10.54□□□□□ -0.72
CCDC113-204ENST00000566498 PSMB2P49721 201 aa10.54□□□□□ -0.72
CCDC113-204ENST00000566498 NDUFV3P56181 108 aaKnown RBP10.54□□□□□ -0.72
CCDC113-204ENST00000566498 FABP2P12104 132 aa10.53□□□□□ -0.72
CCDC113-204ENST00000566498 K7ERJ3 54 aa10.52□□□□□ -0.73
CCDC113-204ENST00000566498 KRTAP4-1Q9BYQ7 146 aa10.51□□□□□ -0.73
CCDC113-204ENST00000566498 COX6CP09669 75 aa10.5□□□□□ -0.73
CCDC113-204ENST00000566498 H3BMG7 143 aa10.49□□□□□ -0.73
CCDC113-204ENST00000566498 LOC105371267A0A1B0GV96 52 aa10.48□□□□□ -0.73
CCDC113-204ENST00000566498 PCOTHQ58A44 107 aa10.48□□□□□ -0.73
CCDC113-204ENST00000566498 DNAL4O96015 105 aa10.47□□□□□ -0.73
CCDC113-204ENST00000566498 LST1O00453 97 aa10.45□□□□□ -0.74
CCDC113-204ENST00000566498 TEN1Q86WV5 123 aa10.45□□□□□ -0.74
CCDC113-204ENST00000566498 LCE2AQ5TA79 106 aaPredicted RBP10.43□□□□□ -0.74
CCDC113-204ENST00000566498 ORMDL1Q9P0S3 153 aa10.43□□□□□ -0.74
CCDC113-204ENST00000566498 FAT4Q6V0I7 4981 aa10.43□□□□□ -0.74
CCDC113-204ENST00000566498 SCGB1C2P0DMR2 95 aa10.42□□□□□ -0.74
CCDC113-204ENST00000566498 Q6Q795 121 aa10.42□□□□□ -0.74
CCDC113-204ENST00000566498 SS18L2Q9UHA2 77 aa10.42□□□□□ -0.74
CCDC113-204ENST00000566498 H3BQ85 93 aa10.41□□□□□ -0.74
CCDC113-204ENST00000566498 A0A087WSZ3 146 aa10.38□□□□□ -0.75
CCDC113-204ENST00000566498 A0A1B0GV72 72 aa10.38□□□□□ -0.75
CCDC113-204ENST00000566498 TMEM256-PLSCR3K7ERE1 68 aa10.38□□□□□ -0.75
CCDC113-204ENST00000566498 RPL37P61927 97 aaKnown RBP10.38□□□□□ -0.75
CCDC113-204ENST00000566498 ANKRD29Q8N6D5 301 aa10.38□□□□□ -0.75
CCDC113-204ENST00000566498 OBSCN-AS1Q96MR7 158 aa10.36□□□□□ -0.75
CCDC113-204ENST00000566498 A0A1W2PNM2 257 aa10.33□□□□□ -0.76
CCDC113-204ENST00000566498 TRACP01848 142 aa10.31□□□□□ -0.76
CCDC113-204ENST00000566498 M0R143 59 aa10.3□□□□□ -0.76
CCDC113-204ENST00000566498 UBE2V1Q13404 147 aa10.3□□□□□ -0.76
CCDC113-204ENST00000566498 Q96NJ1 140 aa10.29□□□□□ -0.76
CCDC113-204ENST00000566498 TRBV7-4A0A0J9YYF1 115 aa10.28□□□□□ -0.76
CCDC113-204ENST00000566498 SMIM6P0DI80 62 aa10.28□□□□□ -0.76
CCDC113-204ENST00000566498 CCKP06307 115 aa10.26□□□□□ -0.77
CCDC113-204ENST00000566498 ATP11AUNQ6ZP68 121 aa10.26□□□□□ -0.77
CCDC113-204ENST00000566498 BAALC-AS2P0C853 105 aa10.25□□□□□ -0.77
CCDC113-204ENST00000566498 Q75L30 129 aa10.24□□□□□ -0.77
CCDC113-204ENST00000566498 RBM3P98179 157 aaKnown RBP10.23□□□□□ -0.77
CCDC113-204ENST00000566498 SIGMAR1Q99720 223 aa10.23□□□□□ -0.77
CCDC113-204ENST00000566498 NAA38Q9BRA0 125 aaKnown RBP10.22□□□□□ -0.77
CCDC113-204ENST00000566498 VPS25Q9BRG1 176 aa10.22□□□□□ -0.77
CCDC113-204ENST00000566498 IGKV4-1P06312 121 aa10.21□□□□□ -0.77
CCDC113-204ENST00000566498 LCE2CQ5TA81 110 aa10.21□□□□□ -0.77
CCDC113-204ENST00000566498 DSCR8Q96T75 97 aa10.21□□□□□ -0.77
CCDC113-204ENST00000566498 TSTD3H0UI37 97 aa10.19□□□□□ -0.78
CCDC113-204ENST00000566498 ATXN8Q156A1 80 aa10.19□□□□□ -0.78
CCDC113-204ENST00000566498 DSCR10P59022 87 aa10.18□□□□□ -0.78
CCDC113-204ENST00000566498 DEFB116Q30KQ4 102 aa10.18□□□□□ -0.78
CCDC113-204ENST00000566498 KRTAP19-2Q3LHN2 52 aa10.18□□□□□ -0.78
CCDC113-204ENST00000566498 C9JAW5 83 aa10.15□□□□□ -0.78
CCDC113-204ENST00000566498 LINC00313P59037 77 aa10.15□□□□□ -0.78
CCDC113-204ENST00000566498 BATFQ16520 125 aa10.15□□□□□ -0.78
CCDC113-204ENST00000566498 C20orf166-AS1Q96NR2 134 aa10.14□□□□□ -0.79
CCDC113-204ENST00000566498 KRTAP9-2Q9BYQ4 174 aa10.14□□□□□ -0.79
CCDC113-204ENST00000566498 LINC00472Q9H8W2 130 aa10.14□□□□□ -0.79
CCDC113-204ENST00000566498 COX6B2Q6YFQ2 88 aa10.13□□□□□ -0.79
CCDC113-204ENST00000566498 A8MUU9 505 aa10.12□□□□□ -0.79
CCDC113-204ENST00000566498 LYRM7Q5U5X0 104 aa10.1□□□□□ -0.79
CCDC113-204ENST00000566498 MT1HP80294 61 aa10.09□□□□□ -0.79
CCDC113-204ENST00000566498 IGHV6-1A0A0B4J1U7 121 aa10.08□□□□□ -0.8
CCDC113-204ENST00000566498 PCP4L1A6NKN8 68 aa10.08□□□□□ -0.8
CCDC113-204ENST00000566498 JMJD7-PLA2G4BH0Y9G9 81 aa10.08□□□□□ -0.8
CCDC113-204ENST00000566498 C21orf62-AS1Q17RA5 79 aa10.06□□□□□ -0.8
CCDC113-204ENST00000566498 NOTCH2NLQ7Z3S9 236 aa10.06□□□□□ -0.8
CCDC113-204ENST00000566498 TRBV20-1A0A075B6N2 111 aa10.05□□□□□ -0.8
CCDC113-204ENST00000566498 M0R2T5 61 aa10.03□□□□□ -0.8
CCDC113-204ENST00000566498 Q6ZQT0 140 aa10.03□□□□□ -0.8
CCDC113-204ENST00000566498 KRTAP16-1A8MUX0 517 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms