RNA–Protein interactions for RNA: ENST00000565936.1

LINC01043-201, Transcript of long intergenic non-protein coding RNA 1043, humanhuman

TSL 1 (best) BASIC

Gene LINC01043, Length 6,897 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01043-201ENST00000565936 CSAG1Q6PB30 78 aa3.95□□□□□ -1.78
LINC01043-201ENST00000565936 LINC00483Q53H64 154 aa3.95□□□□□ -1.78
LINC01043-201ENST00000565936 HRES1P13985 223 aa3.95□□□□□ -1.78
LINC01043-201ENST00000565936 LUZP6Q538Z0 58 aa3.94□□□□□ -1.78
LINC01043-201ENST00000565936 UNC79Q9P2D8 2635 aa3.94□□□□□ -1.78
LINC01043-201ENST00000565936 H7BZZ5 65 aa3.94□□□□□ -1.78
LINC01043-201ENST00000565936 IGSF10Q6WRI0 2623 aa3.94□□□□□ -1.78
LINC01043-201ENST00000565936 S4R3F8 94 aa3.93□□□□□ -1.78
LINC01043-201ENST00000565936 CENPEQ02224 2701 aa3.92□□□□□ -1.78
LINC01043-201ENST00000565936 LAMA3Q16787 3333 aa3.92□□□□□ -1.78
LINC01043-201ENST00000565936 TEX15Q9BXT5 2789 aa3.92□□□□□ -1.78
LINC01043-201ENST00000565936 MMP24-AS1A0A0U1RRL7 71 aa3.91□□□□□ -1.78
LINC01043-201ENST00000565936 STAB1Q9NY15 2570 aa3.91□□□□□ -1.78
LINC01043-201ENST00000565936 KMT2BQ9UMN6 2715 aaPredicted RBP3.91□□□□□ -1.78
LINC01043-201ENST00000565936 OCR1Q9BZK8 76 aa3.91□□□□□ -1.78
LINC01043-201ENST00000565936 COL6A5A8TX70 2615 aa3.91□□□□□ -1.78
LINC01043-201ENST00000565936 TEP1Q99973 2627 aaKnown RBP3.91□□□□□ -1.78
LINC01043-201ENST00000565936 LINC00472Q9H8W2 130 aa3.91□□□□□ -1.78
LINC01043-201ENST00000565936 RPS29P62273 56 aaKnown RBP3.9□□□□□ -1.79
LINC01043-201ENST00000565936 Q8NDZ9 215 aa3.9□□□□□ -1.79
LINC01043-201ENST00000565936 MKI67P46013 3256 aaKnown RBP3.9□□□□□ -1.79
LINC01043-201ENST00000565936 AKAP13Q12802 2813 aa3.89□□□□□ -1.79
LINC01043-201ENST00000565936 MGAQ8IWI9 3026 aa3.89□□□□□ -1.79
LINC01043-201ENST00000565936 CAMK2N1Q7Z7J9 78 aa3.89□□□□□ -1.79
LINC01043-201ENST00000565936 BRCA2P51587 3418 aa3.89□□□□□ -1.79
LINC01043-201ENST00000565936 SPINK7P58062 85 aa3.89□□□□□ -1.79
LINC01043-201ENST00000565936 Q1T7F1 81 aa3.89□□□□□ -1.79
LINC01043-201ENST00000565936 SETXQ7Z333 2677 aaKnown RBP3.88□□□□□ -1.79
LINC01043-201ENST00000565936 Q6ZRN7 208 aaPredicted RBP3.88□□□□□ -1.79
LINC01043-201ENST00000565936 Q5W150 140 aa3.86□□□□□ -1.79
LINC01043-201ENST00000565936 A0A1B0GU33 70 aa3.86□□□□□ -1.79
LINC01043-201ENST00000565936 KRTAP4-16G5E9R7 235 aaPredicted RBP3.85□□□□□ -1.79
LINC01043-201ENST00000565936 PANO1I0J062 215 aa3.84□□□□□ -1.79
LINC01043-201ENST00000565936 ASB16-AS1Q495Z4 193 aa3.84□□□□□ -1.79
LINC01043-201ENST00000565936 DMAC1Q96GE9 116 aa3.84□□□□□ -1.8
LINC01043-201ENST00000565936 ITPR2Q14571 2701 aa3.84□□□□□ -1.8
LINC01043-201ENST00000565936 DSPP15924 2871 aaKnown RBP3.83□□□□□ -1.8
LINC01043-201ENST00000565936 GCN1Q92616 2671 aaKnown RBP3.82□□□□□ -1.8
LINC01043-201ENST00000565936 R4GN34 69 aa3.82□□□□□ -1.8
LINC01043-201ENST00000565936 Q8N9P0 234 aaPredicted RBP3.82□□□□□ -1.8
LINC01043-201ENST00000565936 Q75L30 129 aa3.82□□□□□ -1.8
LINC01043-201ENST00000565936 CHD6Q8TD26 2715 aa3.82□□□□□ -1.8
LINC01043-201ENST00000565936 UNC80Q8N2C7 3258 aa3.81□□□□□ -1.8
LINC01043-201ENST00000565936 LAMA2P24043 3122 aaKnown RBP3.81□□□□□ -1.8
LINC01043-201ENST00000565936 A0A087X002 238 aa3.81□□□□□ -1.8
LINC01043-201ENST00000565936 Q5XG85 94 aa3.79□□□□□ -1.8
LINC01043-201ENST00000565936 A0A0A0MQY5 61 aa3.78□□□□□ -1.8
LINC01043-201ENST00000565936 NSD1Q96L73 2696 aaPredicted RBP3.78□□□□□ -1.8
LINC01043-201ENST00000565936 PRAC1Q96KF2 57 aa3.77□□□□□ -1.81
LINC01043-201ENST00000565936 H3BS24 57 aa3.77□□□□□ -1.81
LINC01043-201ENST00000565936 NBEAL1Q6ZS30 2694 aa3.77□□□□□ -1.81
LINC01043-201ENST00000565936 NOTCH1P46531 2555 aa3.77□□□□□ -1.81
LINC01043-201ENST00000565936 LINC01558Q9Y6Z2 57 aa3.77□□□□□ -1.81
LINC01043-201ENST00000565936 TRIOO75962 3097 aa3.76□□□□□ -1.81
LINC01043-201ENST00000565936 PRUNE2Q8WUY3 3088 aa3.76□□□□□ -1.81
LINC01043-201ENST00000565936 PLAC4Q8WY50 150 aa3.76□□□□□ -1.81
LINC01043-201ENST00000565936 CDH23Q9H251 3354 aa3.75□□□□□ -1.81
LINC01043-201ENST00000565936 H1FX-AS1Q4G0G2 97 aa3.74□□□□□ -1.81
LINC01043-201ENST00000565936 WDFY4Q6ZS81 3184 aa3.74□□□□□ -1.81
LINC01043-201ENST00000565936 KRTAP13-1Q8IUC0 172 aa3.73□□□□□ -1.81
LINC01043-201ENST00000565936 M0QZ58 72 aa3.72□□□□□ -1.81
LINC01043-201ENST00000565936 MAP1AP78559 2803 aaPredicted RBP3.72□□□□□ -1.81
LINC01043-201ENST00000565936 RPL37P61927 97 aaKnown RBP3.72□□□□□ -1.81
LINC01043-201ENST00000565936 A0A0C4DFX4 3053 aa3.71□□□□□ -1.81
LINC01043-201ENST00000565936 UBR5O95071 2799 aaPredicted RBP3.71□□□□□ -1.81
LINC01043-201ENST00000565936 Q5VV11 94 aa3.71□□□□□ -1.82
LINC01043-201ENST00000565936 KRTAP11-1Q8IUC1 163 aa3.71□□□□□ -1.82
LINC01043-201ENST00000565936 KRTAP13-2Q52LG2 175 aa3.71□□□□□ -1.82
LINC01043-201ENST00000565936 KRTAP29-1A8MX34 341 aaPredicted RBP3.71□□□□□ -1.82
LINC01043-201ENST00000565936 SZT2Q5T011 3432 aa3.71□□□□□ -1.82
LINC01043-201ENST00000565936 HIVEP1P15822 2718 aa3.7□□□□□ -1.82
LINC01043-201ENST00000565936 CFAP54Q96N23 3096 aa3.7□□□□□ -1.82
LINC01043-201ENST00000565936 ROMO1P60602 79 aa3.69□□□□□ -1.82
LINC01043-201ENST00000565936 KRTAP7-1Q8IUC3 87 aa3.69□□□□□ -1.82
LINC01043-201ENST00000565936 ADM2Q7Z4H4 148 aa3.69□□□□□ -1.82
LINC01043-201ENST00000565936 ITPR1Q14643 2758 aa3.69□□□□□ -1.82
LINC01043-201ENST00000565936 XIRP2A4UGR9 3374 aa3.69□□□□□ -1.82
LINC01043-201ENST00000565936 TNRC18O15417 2968 aaPredicted RBP3.68□□□□□ -1.82
LINC01043-201ENST00000565936 CYSTM1Q9H1C7 97 aa3.67□□□□□ -1.82
LINC01043-201ENST00000565936 UTP20O75691 2785 aaKnown RBP3.66□□□□□ -1.82
LINC01043-201ENST00000565936 FLNCQ14315 2725 aa3.66□□□□□ -1.82
LINC01043-201ENST00000565936 NOTCH2NLQ7Z3S9 236 aa3.65□□□□□ -1.83
LINC01043-201ENST00000565936 C20orf166-AS1Q96NR2 134 aa3.64□□□□□ -1.83
LINC01043-201ENST00000565936 NBEAL2Q6ZNJ1 2754 aa3.64□□□□□ -1.83
LINC01043-201ENST00000565936 APCP25054 2843 aa3.64□□□□□ -1.83
LINC01043-201ENST00000565936 STAB2Q8WWQ8 2551 aa3.63□□□□□ -1.83
LINC01043-201ENST00000565936 USP34Q70CQ2 3546 aa3.63□□□□□ -1.83
LINC01043-201ENST00000565936 FRYQ5TBA9 3013 aa3.63□□□□□ -1.83
LINC01043-201ENST00000565936 FLG2Q5D862 2391 aaPredicted RBP3.62□□□□□ -1.83
LINC01043-201ENST00000565936 A8MUU9 505 aa3.62□□□□□ -1.83
LINC01043-201ENST00000565936 FREM2Q5SZK8 3169 aa3.62□□□□□ -1.83
LINC01043-201ENST00000565936 VPS13AQ96RL7 3174 aa3.62□□□□□ -1.83
LINC01043-201ENST00000565936 DMBT1Q9UGM3 2413 aaPredicted RBP3.61□□□□□ -1.83
LINC01043-201ENST00000565936 LAMA1P25391 3075 aa3.61□□□□□ -1.83
LINC01043-201ENST00000565936 TENM4Q6N022 2769 aa3.61□□□□□ -1.83
LINC01043-201ENST00000565936 SPATA8Q6RVD6 105 aa3.6□□□□□ -1.83
LINC01043-201ENST00000565936 VCANP13611 3396 aa3.6□□□□□ -1.83
LINC01043-201ENST00000565936 TPRXLQ17RH7 258 aa3.6□□□□□ -1.83
LINC01043-201ENST00000565936 FRYLO94915 3013 aa3.59□□□□□ -1.83
LINC01043-201ENST00000565936 ATMQ13315 3056 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms