RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 MGAQ8IWI9 3026 aa8.35□□□□□ -1.07
CX3CL1-204ENST00000565912 WIPF1O43516 503 aa8.34□□□□□ -1.07
CX3CL1-204ENST00000565912 DMAC1Q96GE9 116 aa8.34□□□□□ -1.07
CX3CL1-204ENST00000565912 Q75L30 129 aa8.33□□□□□ -1.08
CX3CL1-204ENST00000565912 ZNF292O60281 2723 aa8.31□□□□□ -1.08
CX3CL1-204ENST00000565912 UNC80Q8N2C7 3258 aa8.31□□□□□ -1.08
CX3CL1-204ENST00000565912 R4GN34 69 aa8.3□□□□□ -1.08
CX3CL1-204ENST00000565912 SPINK7P58062 85 aa8.3□□□□□ -1.08
CX3CL1-204ENST00000565912 Q5W150 140 aa8.3□□□□□ -1.08
CX3CL1-204ENST00000565912 Q8NDZ9 215 aa8.29□□□□□ -1.08
CX3CL1-204ENST00000565912 LINC01558Q9Y6Z2 57 aa8.29□□□□□ -1.08
CX3CL1-204ENST00000565912 CFAP54Q96N23 3096 aa8.28□□□□□ -1.08
CX3CL1-204ENST00000565912 CENPEQ02224 2701 aa8.28□□□□□ -1.08
CX3CL1-204ENST00000565912 SPRR1AP35321 89 aa8.27□□□□□ -1.09
CX3CL1-204ENST00000565912 LAMA2P24043 3122 aaKnown RBP8.27□□□□□ -1.09
CX3CL1-204ENST00000565912 CDH23Q9H251 3354 aa8.27□□□□□ -1.09
CX3CL1-204ENST00000565912 SEC61BP60468 96 aaKnown RBP8.26□□□□□ -1.09
CX3CL1-204ENST00000565912 WDFY4Q6ZS81 3184 aa8.25□□□□□ -1.09
CX3CL1-204ENST00000565912 Q5VSD8 79 aa8.25□□□□□ -1.09
CX3CL1-204ENST00000565912 PRAC1Q96KF2 57 aa8.24□□□□□ -1.09
CX3CL1-204ENST00000565912 AKAP13Q12802 2813 aa8.23□□□□□ -1.09
CX3CL1-204ENST00000565912 XIRP2A4UGR9 3374 aa8.23□□□□□ -1.09
CX3CL1-204ENST00000565912 LINC00472Q9H8W2 130 aa8.23□□□□□ -1.09
CX3CL1-204ENST00000565912 SPRR1BP22528 89 aa8.2□□□□□ -1.1
CX3CL1-204ENST00000565912 KRTAP1-5Q9BYS1 174 aa8.2□□□□□ -1.1
CX3CL1-204ENST00000565912 STAB1Q9NY15 2570 aa8.18□□□□□ -1.1
CX3CL1-204ENST00000565912 KRTAP10-1P60331 282 aa8.17□□□□□ -1.1
CX3CL1-204ENST00000565912 A0A0C4DFX4 3053 aa8.17□□□□□ -1.1
CX3CL1-204ENST00000565912 FLG2Q5D862 2391 aaPredicted RBP8.15□□□□□ -1.11
CX3CL1-204ENST00000565912 M0QZ58 72 aa8.14□□□□□ -1.11
CX3CL1-204ENST00000565912 Q5VV11 94 aa8.14□□□□□ -1.11
CX3CL1-204ENST00000565912 A0A0A0MQY5 61 aa8.14□□□□□ -1.11
CX3CL1-204ENST00000565912 KRTAP10-2P60368 255 aa8.14□□□□□ -1.11
CX3CL1-204ENST00000565912 TRIOO75962 3097 aa8.13□□□□□ -1.11
CX3CL1-204ENST00000565912 CYSTM1Q9H1C7 97 aa8.13□□□□□ -1.11
CX3CL1-204ENST00000565912 LCE6AA0A183 80 aa8.12□□□□□ -1.11
CX3CL1-204ENST00000565912 FP248Q71RG6 208 aaPredicted RBP8.12□□□□□ -1.11
CX3CL1-204ENST00000565912 Q5XG85 94 aa8.12□□□□□ -1.11
CX3CL1-204ENST00000565912 RPL37P61927 97 aaKnown RBP8.12□□□□□ -1.11
CX3CL1-204ENST00000565912 DSPP15924 2871 aaKnown RBP8.11□□□□□ -1.11
CX3CL1-204ENST00000565912 KRTAP26-1Q6PEX3 210 aa8.11□□□□□ -1.11
CX3CL1-204ENST00000565912 SZT2Q5T011 3432 aa8.09□□□□□ -1.11
CX3CL1-204ENST00000565912 ROMO1P60602 79 aa8.07□□□□□ -1.12
CX3CL1-204ENST00000565912 PLAC4Q8WY50 150 aa8.06□□□□□ -1.12
CX3CL1-204ENST00000565912 H1FX-AS1Q4G0G2 97 aa8.05□□□□□ -1.12
CX3CL1-204ENST00000565912 TEP1Q99973 2627 aaKnown RBP8.05□□□□□ -1.12
CX3CL1-204ENST00000565912 IGSF10Q6WRI0 2623 aa8.05□□□□□ -1.12
CX3CL1-204ENST00000565912 VPS13AQ96RL7 3174 aa8.04□□□□□ -1.12
CX3CL1-204ENST00000565912 ADM2Q7Z4H4 148 aa8.03□□□□□ -1.12
CX3CL1-204ENST00000565912 TEX15Q9BXT5 2789 aa8.02□□□□□ -1.13
CX3CL1-204ENST00000565912 H3BS24 57 aa8.01□□□□□ -1.13
CX3CL1-204ENST00000565912 Q6ZR54 194 aa8□□□□□ -1.13
CX3CL1-204ENST00000565912 PANO1I0J062 215 aa7.99□□□□□ -1.13
CX3CL1-204ENST00000565912 SPATA8Q6RVD6 105 aa7.99□□□□□ -1.13
CX3CL1-204ENST00000565912 CHD6Q8TD26 2715 aa7.99□□□□□ -1.13
CX3CL1-204ENST00000565912 NBEAL1Q6ZS30 2694 aa7.98□□□□□ -1.13
CX3CL1-204ENST00000565912 CELSR3Q9NYQ7 3312 aa7.97□□□□□ -1.13
CX3CL1-204ENST00000565912 OXTP01178 125 aa7.96□□□□□ -1.13
CX3CL1-204ENST00000565912 UNC79Q9P2D8 2635 aa7.96□□□□□ -1.14
CX3CL1-204ENST00000565912 A0A087X002 238 aa7.94□□□□□ -1.14
CX3CL1-204ENST00000565912 DNAH14Q0VDD8 3507 aa7.93□□□□□ -1.14
CX3CL1-204ENST00000565912 LAMA1P25391 3075 aa7.92□□□□□ -1.14
CX3CL1-204ENST00000565912 VCANP13611 3396 aa7.92□□□□□ -1.14
CX3CL1-204ENST00000565912 COL6A5A8TX70 2615 aa7.92□□□□□ -1.14
CX3CL1-204ENST00000565912 SETXQ7Z333 2677 aaKnown RBP7.91□□□□□ -1.14
CX3CL1-204ENST00000565912 FRYQ5TBA9 3013 aa7.91□□□□□ -1.14
CX3CL1-204ENST00000565912 MAP1AP78559 2803 aaPredicted RBP7.9□□□□□ -1.14
CX3CL1-204ENST00000565912 KRTAP4-16G5E9R7 235 aaPredicted RBP7.89□□□□□ -1.15
CX3CL1-204ENST00000565912 BAHCC1Q9P281 2608 aa7.88□□□□□ -1.15
CX3CL1-204ENST00000565912 DMBT1Q9UGM3 2413 aaPredicted RBP7.88□□□□□ -1.15
CX3CL1-204ENST00000565912 KRTAP29-1A8MX34 341 aaPredicted RBP7.86□□□□□ -1.15
CX3CL1-204ENST00000565912 NOTCH2NLQ7Z3S9 236 aa7.85□□□□□ -1.15
CX3CL1-204ENST00000565912 GCN1Q92616 2671 aaKnown RBP7.84□□□□□ -1.15
CX3CL1-204ENST00000565912 COL6A3P12111 3177 aa7.81□□□□□ -1.16
CX3CL1-204ENST00000565912 STAB2Q8WWQ8 2551 aa7.79□□□□□ -1.16
CX3CL1-204ENST00000565912 NOTCH1P46531 2555 aa7.79□□□□□ -1.16
CX3CL1-204ENST00000565912 SPTBN5Q9NRC6 3674 aaKnown RBP7.78□□□□□ -1.16
CX3CL1-204ENST00000565912 ATMQ13315 3056 aa7.78□□□□□ -1.16
CX3CL1-204ENST00000565912 TNRC18O15417 2968 aaPredicted RBP7.77□□□□□ -1.17
CX3CL1-204ENST00000565912 A8MUU9 505 aa7.76□□□□□ -1.17
CX3CL1-204ENST00000565912 KRTAP11-1Q8IUC1 163 aa7.75□□□□□ -1.17
CX3CL1-204ENST00000565912 NBEAL2Q6ZNJ1 2754 aa7.75□□□□□ -1.17
CX3CL1-204ENST00000565912 FRYLO94915 3013 aa7.75□□□□□ -1.17
CX3CL1-204ENST00000565912 UBR5O95071 2799 aaPredicted RBP7.74□□□□□ -1.17
CX3CL1-204ENST00000565912 BOD1L1Q8NFC6 3051 aa7.74□□□□□ -1.17
CX3CL1-204ENST00000565912 A8MU10 97 aa7.74□□□□□ -1.17
CX3CL1-204ENST00000565912 DMXL2Q8TDJ6 3036 aa7.72□□□□□ -1.17
CX3CL1-204ENST00000565912 ASB16-AS1Q495Z4 193 aa7.71□□□□□ -1.17
CX3CL1-204ENST00000565912 COL12A1Q99715 3063 aa7.71□□□□□ -1.17
CX3CL1-204ENST00000565912 ITPR2Q14571 2701 aa7.7□□□□□ -1.18
CX3CL1-204ENST00000565912 C20orf166-AS1Q96NR2 134 aa7.7□□□□□ -1.18
CX3CL1-204ENST00000565912 FLNCQ14315 2725 aa7.7□□□□□ -1.18
CX3CL1-204ENST00000565912 RPS29P62273 56 aaKnown RBP7.7□□□□□ -1.18
CX3CL1-204ENST00000565912 ITPR1Q14643 2758 aa7.69□□□□□ -1.18
CX3CL1-204ENST00000565912 LRBAP50851 2863 aa7.67□□□□□ -1.18
CX3CL1-204ENST00000565912 KALRNO60229 2985 aa7.67□□□□□ -1.18
CX3CL1-204ENST00000565912 Q6ZRN7 208 aaPredicted RBP7.67□□□□□ -1.18
CX3CL1-204ENST00000565912 ADGRG4Q8IZF6 3080 aa7.66□□□□□ -1.18
CX3CL1-204ENST00000565912 TACC2O95359 2948 aa7.65□□□□□ -1.18
CX3CL1-204ENST00000565912 FREM2Q5SZK8 3169 aa7.65□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 128.8 ms