RNA–Protein interactions for RNA: ENST00000565119.1

CHD9-214, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 824 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-214ENST00000565119 PKDREJQ9NTG1 2253 aa1.59□□□□□ -2.15
CHD9-214ENST00000565119 WT1-ASQ06250 92 aa1.58□□□□□ -2.16
CHD9-214ENST00000565119 PDE4DIPQ5VU43 2346 aa1.57□□□□□ -2.16
CHD9-214ENST00000565119 KRTAP10-4P60372 401 aaPredicted RBP1.57□□□□□ -2.16
CHD9-214ENST00000565119 DSPP15924 2871 aaKnown RBP1.56□□□□□ -2.16
CHD9-214ENST00000565119 SPTBN2O15020 2390 aa1.55□□□□□ -2.16
CHD9-214ENST00000565119 IGF2RP11717 2491 aa1.55□□□□□ -2.16
CHD9-214ENST00000565119 H3BUA1 57 aa1.55□□□□□ -2.16
CHD9-214ENST00000565119 POLR2KP53803 58 aaKnown RBP1.55□□□□□ -2.16
CHD9-214ENST00000565119 WFDC10BQ8IUB3 73 aa1.55□□□□□ -2.16
CHD9-214ENST00000565119 TPRP12270 2363 aaKnown RBP1.55□□□□□ -2.16
CHD9-214ENST00000565119 ZNF292O60281 2723 aa1.53□□□□□ -2.16
CHD9-214ENST00000565119 DEFB131AP59861 70 aa1.53□□□□□ -2.16
CHD9-214ENST00000565119 CACNA1HO95180 2353 aa1.52□□□□□ -2.17
CHD9-214ENST00000565119 KLK9Q2XQG4 91 aa1.52□□□□□ -2.17
CHD9-214ENST00000565119 A0A0C4DFX4 3053 aa1.52□□□□□ -2.17
CHD9-214ENST00000565119 PCNX1Q96RV3 2341 aa1.51□□□□□ -2.17
CHD9-214ENST00000565119 TRANK1O15050 2925 aa1.51□□□□□ -2.17
CHD9-214ENST00000565119 ARHGAP5-AS1Q96IT6 56 aa1.51□□□□□ -2.17
CHD9-214ENST00000565119 KAAG1Q9UBP8 84 aa1.51□□□□□ -2.17
CHD9-214ENST00000565119 SPTBN1Q01082 2364 aaKnown RBP1.51□□□□□ -2.17
CHD9-214ENST00000565119 KNL1Q8NG31 2342 aa1.51□□□□□ -2.17
CHD9-214ENST00000565119 CHD9Q3L8U1 2897 aa1.51□□□□□ -2.17
CHD9-214ENST00000565119 MMP24-AS1A0A0U1RRL7 71 aa1.49□□□□□ -2.17
CHD9-214ENST00000565119 S4R3F8 94 aa1.49□□□□□ -2.17
CHD9-214ENST00000565119 MUC6Q6W4X9 2439 aa1.49□□□□□ -2.17
CHD9-214ENST00000565119 RPL39P62891 51 aaKnown RBP1.47□□□□□ -2.17
CHD9-214ENST00000565119 GVINP1Q7Z2Y8 2422 aa1.46□□□□□ -2.18
CHD9-214ENST00000565119 CELSR2Q9HCU4 2923 aa1.46□□□□□ -2.18
CHD9-214ENST00000565119 POLQO75417 2590 aa1.45□□□□□ -2.18
CHD9-214ENST00000565119 DEFB109BQ30KR1 87 aa1.45□□□□□ -2.18
CHD9-214ENST00000565119 ABCA12Q86UK0 2595 aa1.44□□□□□ -2.18
CHD9-214ENST00000565119 PRRC2CQ9Y520 2896 aaKnown RBP1.43□□□□□ -2.18
CHD9-214ENST00000565119 TTC28Q96AY4 2481 aa1.43□□□□□ -2.18
CHD9-214ENST00000565119 CSPG4Q6UVK1 2322 aa1.43□□□□□ -2.18
CHD9-214ENST00000565119 RPL39LQ96EH5 51 aaKnown RBP1.43□□□□□ -2.18
CHD9-214ENST00000565119 PRLHP81277 87 aa1.42□□□□□ -2.18
CHD9-214ENST00000565119 ABCA2Q9BZC7 2435 aa1.42□□□□□ -2.18
CHD9-214ENST00000565119 TENM1Q9UKZ4 2725 aa1.41□□□□□ -2.18
CHD9-214ENST00000565119 LINC01590Q5TEZ4 76 aa1.4□□□□□ -2.19
CHD9-214ENST00000565119 F8P00451 2351 aa1.39□□□□□ -2.19
CHD9-214ENST00000565119 DEFB106AQ8N104 65 aa1.39□□□□□ -2.19
CHD9-214ENST00000565119 NOP10Q9NPE3 64 aaKnown RBP1.38□□□□□ -2.19
CHD9-214ENST00000565119 CLPSL2Q6UWE3 100 aa1.36□□□□□ -2.19
CHD9-214ENST00000565119 TENM4Q6N022 2769 aa1.35□□□□□ -2.19
CHD9-214ENST00000565119 HELZ2Q9BYK8 2649 aaKnown RBP1.35□□□□□ -2.19
CHD9-214ENST00000565119 CELSR1Q9NYQ6 3014 aa1.34□□□□□ -2.19
CHD9-214ENST00000565119 TTTY10Q9BZA0 68 aa1.34□□□□□ -2.19
CHD9-214ENST00000565119 VWFP04275 2813 aa1.34□□□□□ -2.2
CHD9-214ENST00000565119 CSMD3Q7Z407 3707 aa1.33□□□□□ -2.2
CHD9-214ENST00000565119 M0QY20 66 aa1.33□□□□□ -2.2
CHD9-214ENST00000565119 LEAP2Q969E1 77 aa1.32□□□□□ -2.2
CHD9-214ENST00000565119 AKAP13Q12802 2813 aa1.32□□□□□ -2.2
CHD9-214ENST00000565119 ATRQ13535 2644 aa1.32□□□□□ -2.2
CHD9-214ENST00000565119 A8MTW9 85 aa1.31□□□□□ -2.2
CHD9-214ENST00000565119 CHD7Q9P2D1 2997 aa1.31□□□□□ -2.2
CHD9-214ENST00000565119 SRRM2Q9UQ35 2752 aaKnown RBP1.3□□□□□ -2.2
CHD9-214ENST00000565119 PRCDQ00LT1 54 aa1.3□□□□□ -2.2
CHD9-214ENST00000565119 ANK2Q01484 3957 aa1.3□□□□□ -2.2
CHD9-214ENST00000565119 AKAP6Q13023 2319 aa1.29□□□□□ -2.2
CHD9-214ENST00000565119 CEP290O15078 2479 aa1.29□□□□□ -2.2
CHD9-214ENST00000565119 KRTAP5-10Q6L8G5 202 aa1.29□□□□□ -2.2
CHD9-214ENST00000565119 BDP1A6H8Y1 2624 aa1.29□□□□□ -2.2
CHD9-214ENST00000565119 OTOGQ6ZRI0 2925 aa1.28□□□□□ -2.2
CHD9-214ENST00000565119 FBN2P35556 2912 aa1.27□□□□□ -2.21
CHD9-214ENST00000565119 CHD6Q8TD26 2715 aa1.27□□□□□ -2.21
CHD9-214ENST00000565119 SMR3AQ99954 134 aa1.26□□□□□ -2.21
CHD9-214ENST00000565119 HECTD1Q9ULT8 2610 aa1.26□□□□□ -2.21
CHD9-214ENST00000565119 PKD1L2Q7Z442 2459 aa1.26□□□□□ -2.21
CHD9-214ENST00000565119 PRKDCP78527 4128 aaKnown RBP1.25□□□□□ -2.21
CHD9-214ENST00000565119 SPTA1P02549 2419 aa1.25□□□□□ -2.21
CHD9-214ENST00000565119 UBR5O95071 2799 aaPredicted RBP1.24□□□□□ -2.21
CHD9-214ENST00000565119 SPINK1P00995 79 aa1.24□□□□□ -2.21
CHD9-214ENST00000565119 EP300Q09472 2414 aaPredicted RBP1.23□□□□□ -2.21
CHD9-214ENST00000565119 TNRC18O15417 2968 aaPredicted RBP1.23□□□□□ -2.21
CHD9-214ENST00000565119 H0YGG7 62 aa1.22□□□□□ -2.21
CHD9-214ENST00000565119 H3BSH0 61 aa1.22□□□□□ -2.21
CHD9-214ENST00000565119 M0QZ58 72 aa1.22□□□□□ -2.21
CHD9-214ENST00000565119 DEFB135Q30KP9 77 aa1.22□□□□□ -2.21
CHD9-214ENST00000565119 SPINK6Q6UWN8 80 aa1.22□□□□□ -2.21
CHD9-214ENST00000565119 TOMM7Q9P0U1 55 aa1.22□□□□□ -2.21
CHD9-214ENST00000565119 PIEZO1Q92508 2521 aa1.22□□□□□ -2.21
CHD9-214ENST00000565119 MUC16Q8WXI7 14507 aa1.21□□□□□ -2.22
CHD9-214ENST00000565119 BSNQ9UPA5 3926 aa1.21□□□□□ -2.22
CHD9-214ENST00000565119 M0R2T5 61 aa1.19□□□□□ -2.22
CHD9-214ENST00000565119 KRTAP2-3P0C7H8 128 aa1.19□□□□□ -2.22
CHD9-214ENST00000565119 KRTAP2-4Q9BYR9 128 aa1.19□□□□□ -2.22
CHD9-214ENST00000565119 KRTAP2-1Q9BYU5 128 aa1.19□□□□□ -2.22
CHD9-214ENST00000565119 PDZD2O15018 2839 aa1.19□□□□□ -2.22
CHD9-214ENST00000565119 CREBBPQ92793 2442 aa1.18□□□□□ -2.22
CHD9-214ENST00000565119 TENM2Q9NT68 2774 aa1.17□□□□□ -2.22
CHD9-214ENST00000565119 K7EIM0 57 aa1.17□□□□□ -2.22
CHD9-214ENST00000565119 APCP25054 2843 aa1.17□□□□□ -2.22
CHD9-214ENST00000565119 FRAS1Q86XX4 4008 aa1.17□□□□□ -2.22
CHD9-214ENST00000565119 CHD8Q9HCK8 2581 aa1.16□□□□□ -2.22
CHD9-214ENST00000565119 NCOR1O75376 2440 aa1.16□□□□□ -2.22
CHD9-214ENST00000565119 ZNF469Q96JG9 3925 aaPredicted RBP1.16□□□□□ -2.22
CHD9-214ENST00000565119 COL6A5A8TX70 2615 aa1.15□□□□□ -2.23
CHD9-214ENST00000565119 WNK1Q9H4A3 2382 aa1.15□□□□□ -2.23
CHD9-214ENST00000565119 NAV2Q8IVL1 2488 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms