RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 A0A0B4J2C4 111 aa16.98■□□□□ 0.31
CMTM4-204ENST00000563952 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP16.98■□□□□ 0.31
CMTM4-204ENST00000563952 TMA7Q9Y2S6 64 aaKnown RBP16.97■□□□□ 0.31
CMTM4-204ENST00000563952 CEND1Q8N111 149 aa16.96■□□□□ 0.31
CMTM4-204ENST00000563952 SEC61BP60468 96 aaKnown RBP16.95■□□□□ 0.3
CMTM4-204ENST00000563952 PYY3Q5JQD4 70 aa16.95■□□□□ 0.3
CMTM4-204ENST00000563952 XP32Q5T750 250 aa16.95■□□□□ 0.3
CMTM4-204ENST00000563952 Q5XG85 94 aa16.95■□□□□ 0.3
CMTM4-204ENST00000563952 TMEM238LA0A1B0GVL6 79 aa16.9■□□□□ 0.3
CMTM4-204ENST00000563952 C9orf92A6NGG3 77 aa16.9■□□□□ 0.3
CMTM4-204ENST00000563952 A6NJY4 79 aa16.9■□□□□ 0.3
CMTM4-204ENST00000563952 C1orf195Q5TG92 126 aa16.89■□□□□ 0.29
CMTM4-204ENST00000563952 OCIAD2Q56VL3 154 aa16.88■□□□□ 0.29
CMTM4-204ENST00000563952 Q6JHZ5 121 aa16.88■□□□□ 0.29
CMTM4-204ENST00000563952 PPDPFLQ8WWR9 84 aa16.88■□□□□ 0.29
CMTM4-204ENST00000563952 SNHG12Q9BXW3 62 aa16.88■□□□□ 0.29
CMTM4-204ENST00000563952 IGLV8-61A0A075B6I0 122 aa16.87■□□□□ 0.29
CMTM4-204ENST00000563952 H0YGX0 51 aa16.87■□□□□ 0.29
CMTM4-204ENST00000563952 FXYD2P54710 66 aa16.87■□□□□ 0.29
CMTM4-204ENST00000563952 PRO1854Q9UHT4 67 aa16.86■□□□□ 0.29
CMTM4-204ENST00000563952 SNCGO76070 127 aa16.85■□□□□ 0.29
CMTM4-204ENST00000563952 TCL1BO95988 128 aa16.85■□□□□ 0.29
CMTM4-204ENST00000563952 IGFL1Q6UW32 110 aa16.85■□□□□ 0.29
CMTM4-204ENST00000563952 CLEC2BQ92478 149 aa16.85■□□□□ 0.29
CMTM4-204ENST00000563952 FAM218AQ96MZ4 157 aa16.84■□□□□ 0.29
CMTM4-204ENST00000563952 FAT4Q6V0I7 4981 aa16.81■□□□□ 0.28
CMTM4-204ENST00000563952 KRTAP4-1Q9BYQ7 146 aa16.79■□□□□ 0.28
CMTM4-204ENST00000563952 H3BUT2 72 aa16.78■□□□□ 0.28
CMTM4-204ENST00000563952 HSD52Q0P140 79 aa16.78■□□□□ 0.28
CMTM4-204ENST00000563952 TRBV7-7A0A0K0K1E9 115 aa16.77■□□□□ 0.28
CMTM4-204ENST00000563952 TRIAP1O43715 76 aa16.73■□□□□ 0.27
CMTM4-204ENST00000563952 K7ERJ3 54 aa16.7■□□□□ 0.26
CMTM4-204ENST00000563952 KRTAP9-2Q9BYQ4 174 aa16.7■□□□□ 0.26
CMTM4-204ENST00000563952 UQCR10Q9UDW1 63 aa16.7■□□□□ 0.26
CMTM4-204ENST00000563952 A0A1B0GX51 115 aa16.69■□□□□ 0.26
CMTM4-204ENST00000563952 LCE2AQ5TA79 106 aaPredicted RBP16.69■□□□□ 0.26
CMTM4-204ENST00000563952 NDUFV3P56181 108 aaKnown RBP16.68■□□□□ 0.26
CMTM4-204ENST00000563952 PCOTHQ58A44 107 aa16.66■□□□□ 0.26
CMTM4-204ENST00000563952 PSMB2P49721 201 aa16.65■□□□□ 0.26
CMTM4-204ENST00000563952 FABP2P12104 132 aa16.64■□□□□ 0.25
CMTM4-204ENST00000563952 GHRHP01286 108 aa16.63■□□□□ 0.25
CMTM4-204ENST00000563952 H3BMG7 143 aa16.58■□□□□ 0.24
CMTM4-204ENST00000563952 DNAL4O96015 105 aa16.56■□□□□ 0.24
CMTM4-204ENST00000563952 LST1O00453 97 aa16.55■□□□□ 0.24
CMTM4-204ENST00000563952 COX6CP09669 75 aa16.55■□□□□ 0.24
CMTM4-204ENST00000563952 Q6Q795 121 aa16.55■□□□□ 0.24
CMTM4-204ENST00000563952 TEN1Q86WV5 123 aa16.54■□□□□ 0.24
CMTM4-204ENST00000563952 RPL37P61927 97 aaKnown RBP16.51■□□□□ 0.23
CMTM4-204ENST00000563952 ORMDL1Q9P0S3 153 aa16.51■□□□□ 0.23
CMTM4-204ENST00000563952 SS18L2Q9UHA2 77 aa16.51■□□□□ 0.23
CMTM4-204ENST00000563952 A0A087WSZ3 146 aa16.46■□□□□ 0.23
CMTM4-204ENST00000563952 A0A1B0GV72 72 aa16.46■□□□□ 0.23
CMTM4-204ENST00000563952 H3BQ85 93 aa16.43■□□□□ 0.22
CMTM4-204ENST00000563952 OBSCN-AS1Q96MR7 158 aa16.43■□□□□ 0.22
CMTM4-204ENST00000563952 TMEM256-PLSCR3K7ERE1 68 aa16.4■□□□□ 0.22
CMTM4-204ENST00000563952 SCGB1C2P0DMR2 95 aa16.4■□□□□ 0.22
CMTM4-204ENST00000563952 A0A1W2PNM2 257 aa16.39■□□□□ 0.21
CMTM4-204ENST00000563952 ANKRD29Q8N6D5 301 aa16.39■□□□□ 0.21
CMTM4-204ENST00000563952 TRACP01848 142 aa16.34■□□□□ 0.21
CMTM4-204ENST00000563952 Q96NJ1 140 aa16.31■□□□□ 0.2
CMTM4-204ENST00000563952 KRTAP9-6A0A140TA67 174 aa16.3■□□□□ 0.2
CMTM4-204ENST00000563952 LCE2CQ5TA81 110 aa16.3■□□□□ 0.2
CMTM4-204ENST00000563952 UBE2V1Q13404 147 aa16.29■□□□□ 0.2
CMTM4-204ENST00000563952 KRTAP19-2Q3LHN2 52 aa16.29■□□□□ 0.2
CMTM4-204ENST00000563952 TRBV7-4A0A0J9YYF1 115 aa16.28■□□□□ 0.2
CMTM4-204ENST00000563952 M0R143 59 aa16.28■□□□□ 0.2
CMTM4-204ENST00000563952 SMIM6P0DI80 62 aa16.28■□□□□ 0.2
CMTM4-204ENST00000563952 Q75L30 129 aa16.26■□□□□ 0.19
CMTM4-204ENST00000563952 CCKP06307 115 aa16.24■□□□□ 0.19
CMTM4-204ENST00000563952 SIGMAR1Q99720 223 aa16.24■□□□□ 0.19
CMTM4-204ENST00000563952 ATP11AUNQ6ZP68 121 aa16.23■□□□□ 0.19
CMTM4-204ENST00000563952 NAA38Q9BRA0 125 aaKnown RBP16.2■□□□□ 0.18
CMTM4-204ENST00000563952 BAALC-AS2P0C853 105 aa16.17■□□□□ 0.18
CMTM4-204ENST00000563952 IGKV4-1P06312 121 aa16.16■□□□□ 0.18
CMTM4-204ENST00000563952 DSCR10P59022 87 aa16.16■□□□□ 0.18
CMTM4-204ENST00000563952 RBM3P98179 157 aaKnown RBP16.16■□□□□ 0.18
CMTM4-204ENST00000563952 VPS25Q9BRG1 176 aa16.16■□□□□ 0.18
CMTM4-204ENST00000563952 DSCR8Q96T75 97 aa16.13■□□□□ 0.17
CMTM4-204ENST00000563952 MT1HP80294 61 aa16.12■□□□□ 0.17
CMTM4-204ENST00000563952 C20orf166-AS1Q96NR2 134 aa16.12■□□□□ 0.17
CMTM4-204ENST00000563952 ATXN8Q156A1 80 aa16.11■□□□□ 0.17
CMTM4-204ENST00000563952 DEFB116Q30KQ4 102 aa16.11■□□□□ 0.17
CMTM4-204ENST00000563952 A8MUU9 505 aa16.09■□□□□ 0.17
CMTM4-204ENST00000563952 TSTD3H0UI37 97 aa16.08■□□□□ 0.16
CMTM4-204ENST00000563952 COX6B2Q6YFQ2 88 aa16.08■□□□□ 0.16
CMTM4-204ENST00000563952 LINC00472Q9H8W2 130 aa16.08■□□□□ 0.16
CMTM4-204ENST00000563952 LINC00313P59037 77 aa16.05■□□□□ 0.16
CMTM4-204ENST00000563952 C9JAW5 83 aa16.03■□□□□ 0.16
CMTM4-204ENST00000563952 BATFQ16520 125 aa16.03■□□□□ 0.16
CMTM4-204ENST00000563952 LOC105371267A0A1B0GV96 52 aa15.98■□□□□ 0.15
CMTM4-204ENST00000563952 IGHV6-1A0A0B4J1U7 121 aa15.97■□□□□ 0.15
CMTM4-204ENST00000563952 NOTCH2NLQ7Z3S9 236 aa15.96■□□□□ 0.15
CMTM4-204ENST00000563952 LYRM7Q5U5X0 104 aa15.95■□□□□ 0.14
CMTM4-204ENST00000563952 KRTAP16-1A8MUX0 517 aa15.94■□□□□ 0.14
CMTM4-204ENST00000563952 JMJD7-PLA2G4BH0Y9G9 81 aa15.93■□□□□ 0.14
CMTM4-204ENST00000563952 C21orf62-AS1Q17RA5 79 aa15.9■□□□□ 0.14
CMTM4-204ENST00000563952 M0R2T5 61 aa15.89■□□□□ 0.13
CMTM4-204ENST00000563952 Q6ZQT0 140 aa15.88■□□□□ 0.13
CMTM4-204ENST00000563952 TRBV20-1A0A075B6N2 111 aa15.87■□□□□ 0.13
CMTM4-204ENST00000563952 A0A1B0GVX0 72 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms