RNA–Protein interactions for RNA: ENST00000563835.1

PTPN9-203, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 338 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-203ENST00000563835 HIST1H4GQ99525 98 aa5.03□□□□□ -1.6
PTPN9-203ENST00000563835 C1orf195Q5TG92 126 aa5.02□□□□□ -1.61
PTPN9-203ENST00000563835 hADV29S1A0JD25 119 aa5.01□□□□□ -1.61
PTPN9-203ENST00000563835 PCP4L1A6NKN8 68 aa5.01□□□□□ -1.61
PTPN9-203ENST00000563835 VAMP3Q15836 100 aa5.01□□□□□ -1.61
PTPN9-203ENST00000563835 KRTAP9-2Q9BYQ4 174 aa5.01□□□□□ -1.61
PTPN9-203ENST00000563835 F8WEM9 126 aa5□□□□□ -1.61
PTPN9-203ENST00000563835 PCOTHQ58A44 107 aa5□□□□□ -1.61
PTPN9-203ENST00000563835 Q5XG85 94 aa5□□□□□ -1.61
PTPN9-203ENST00000563835 C2orf91Q6ZV80 131 aa5□□□□□ -1.61
PTPN9-203ENST00000563835 DLEU1O43261 78 aa4.99□□□□□ -1.61
PTPN9-203ENST00000563835 CFC1BP0CG36 223 aa4.99□□□□□ -1.61
PTPN9-203ENST00000563835 CFC1P0CG37 223 aa4.99□□□□□ -1.61
PTPN9-203ENST00000563835 IGFL1Q6UW32 110 aa4.99□□□□□ -1.61
PTPN9-203ENST00000563835 CLEC2BQ92478 149 aa4.98□□□□□ -1.61
PTPN9-203ENST00000563835 IGLV8-61A0A075B6I0 122 aa4.97□□□□□ -1.61
PTPN9-203ENST00000563835 TSTD3H0UI37 97 aa4.97□□□□□ -1.61
PTPN9-203ENST00000563835 H3BUT2 72 aa4.97□□□□□ -1.61
PTPN9-203ENST00000563835 KRTAP19-2Q3LHN2 52 aa4.97□□□□□ -1.61
PTPN9-203ENST00000563835 BVES-AS1Q5T3Y7 98 aa4.97□□□□□ -1.61
PTPN9-203ENST00000563835 LCE2CQ5TA81 110 aa4.97□□□□□ -1.61
PTPN9-203ENST00000563835 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.97□□□□□ -1.61
PTPN9-203ENST00000563835 FAM218AQ96MZ4 157 aa4.97□□□□□ -1.61
PTPN9-203ENST00000563835 UQCR10Q9UDW1 63 aa4.97□□□□□ -1.61
PTPN9-203ENST00000563835 RAB37Q96AX2 223 aa4.96□□□□□ -1.62
PTPN9-203ENST00000563835 HIGD1BQ9P298 99 aa4.96□□□□□ -1.62
PTPN9-203ENST00000563835 A0A0B4J2C4 111 aa4.95□□□□□ -1.62
PTPN9-203ENST00000563835 TRBV7-7A0A0K0K1E9 115 aa4.95□□□□□ -1.62
PTPN9-203ENST00000563835 TCL1BO95988 128 aa4.95□□□□□ -1.62
PTPN9-203ENST00000563835 OCIAD2Q56VL3 154 aa4.95□□□□□ -1.62
PTPN9-203ENST00000563835 Q6JHZ5 121 aa4.95□□□□□ -1.62
PTPN9-203ENST00000563835 RPL37P61927 97 aaKnown RBP4.94□□□□□ -1.62
PTPN9-203ENST00000563835 CEND1Q8N111 149 aa4.94□□□□□ -1.62
PTPN9-203ENST00000563835 FXYD2P54710 66 aa4.93□□□□□ -1.62
PTPN9-203ENST00000563835 PPDPFLQ8WWR9 84 aa4.92□□□□□ -1.62
PTPN9-203ENST00000563835 SNHG12Q9BXW3 62 aa4.92□□□□□ -1.62
PTPN9-203ENST00000563835 K7ERJ3 54 aa4.9□□□□□ -1.63
PTPN9-203ENST00000563835 TRIAP1O43715 76 aa4.9□□□□□ -1.63
PTPN9-203ENST00000563835 MT1HP80294 61 aa4.9□□□□□ -1.63
PTPN9-203ENST00000563835 BATFQ16520 125 aa4.9□□□□□ -1.63
PTPN9-203ENST00000563835 H0YGX0 51 aa4.89□□□□□ -1.63
PTPN9-203ENST00000563835 NDUFV3P56181 108 aaKnown RBP4.89□□□□□ -1.63
PTPN9-203ENST00000563835 HSD52Q0P140 79 aa4.89□□□□□ -1.63
PTPN9-203ENST00000563835 PRO1854Q9UHT4 67 aa4.89□□□□□ -1.63
PTPN9-203ENST00000563835 TMEM238LA0A1B0GVL6 79 aa4.88□□□□□ -1.63
PTPN9-203ENST00000563835 A6NJY4 79 aa4.88□□□□□ -1.63
PTPN9-203ENST00000563835 OBSCN-AS1Q96MR7 158 aa4.88□□□□□ -1.63
PTPN9-203ENST00000563835 A0A1B0GV72 72 aa4.87□□□□□ -1.63
PTPN9-203ENST00000563835 LST1O00453 97 aa4.87□□□□□ -1.63
PTPN9-203ENST00000563835 A0A087WSZ3 146 aa4.86□□□□□ -1.63
PTPN9-203ENST00000563835 FABP2P12104 132 aa4.86□□□□□ -1.63
PTPN9-203ENST00000563835 Q6Q795 121 aa4.86□□□□□ -1.63
PTPN9-203ENST00000563835 FLGP20930 4061 aaPredicted RBP4.85□□□□□ -1.63
PTPN9-203ENST00000563835 H3BMG7 143 aa4.85□□□□□ -1.63
PTPN9-203ENST00000563835 SNCGO76070 127 aa4.85□□□□□ -1.63
PTPN9-203ENST00000563835 TEN1Q86WV5 123 aa4.85□□□□□ -1.63
PTPN9-203ENST00000563835 Q96NJ1 140 aa4.85□□□□□ -1.63
PTPN9-203ENST00000563835 A0A1B0GX51 115 aa4.84□□□□□ -1.63
PTPN9-203ENST00000563835 A0A1W2PNM2 257 aa4.84□□□□□ -1.63
PTPN9-203ENST00000563835 M0R143 59 aa4.84□□□□□ -1.63
PTPN9-203ENST00000563835 SS18L2Q9UHA2 77 aa4.84□□□□□ -1.63
PTPN9-203ENST00000563835 KRTAP9-6A0A140TA67 174 aa4.83□□□□□ -1.64
PTPN9-203ENST00000563835 PSMB2P49721 201 aa4.83□□□□□ -1.64
PTPN9-203ENST00000563835 Q75L30 129 aa4.83□□□□□ -1.64
PTPN9-203ENST00000563835 NAA38Q9BRA0 125 aaKnown RBP4.82□□□□□ -1.64
PTPN9-203ENST00000563835 TAX1BP3O14907 124 aa4.81□□□□□ -1.64
PTPN9-203ENST00000563835 DNAL4O96015 105 aa4.81□□□□□ -1.64
PTPN9-203ENST00000563835 LCE2DQ5TA82 110 aaPredicted RBP4.81□□□□□ -1.64
PTPN9-203ENST00000563835 COX6B2Q6YFQ2 88 aa4.81□□□□□ -1.64
PTPN9-203ENST00000563835 ORMDL1Q9P0S3 153 aa4.81□□□□□ -1.64
PTPN9-203ENST00000563835 LORP23490 312 aaPredicted RBP4.8□□□□□ -1.64
PTPN9-203ENST00000563835 DSCR10P59022 87 aa4.8□□□□□ -1.64
PTPN9-203ENST00000563835 KRTAP10-6P60371 365 aaPredicted RBP4.8□□□□□ -1.64
PTPN9-203ENST00000563835 ATP11AUNQ6ZP68 121 aa4.8□□□□□ -1.64
PTPN9-203ENST00000563835 SIGMAR1Q99720 223 aa4.8□□□□□ -1.64
PTPN9-203ENST00000563835 C20orf166-AS1Q96NR2 134 aa4.79□□□□□ -1.64
PTPN9-203ENST00000563835 GHRHP01286 108 aa4.78□□□□□ -1.64
PTPN9-203ENST00000563835 COL5A1-AS1Q5SY13 56 aa4.78□□□□□ -1.64
PTPN9-203ENST00000563835 ANKRD29Q8N6D5 301 aa4.78□□□□□ -1.64
PTPN9-203ENST00000563835 A8MUU9 505 aa4.77□□□□□ -1.65
PTPN9-203ENST00000563835 M0R2T5 61 aa4.77□□□□□ -1.65
PTPN9-203ENST00000563835 COX6CP09669 75 aa4.77□□□□□ -1.65
PTPN9-203ENST00000563835 DEFB116Q30KQ4 102 aa4.77□□□□□ -1.65
PTPN9-203ENST00000563835 TRBV7-4A0A0J9YYF1 115 aa4.76□□□□□ -1.65
PTPN9-203ENST00000563835 A0A1B0GV90 55 aa4.76□□□□□ -1.65
PTPN9-203ENST00000563835 TMEM256-PLSCR3K7ERE1 68 aa4.76□□□□□ -1.65
PTPN9-203ENST00000563835 CCKP06307 115 aa4.76□□□□□ -1.65
PTPN9-203ENST00000563835 IGKV4-1P06312 121 aa4.76□□□□□ -1.65
PTPN9-203ENST00000563835 NOTCH2NLQ7Z3S9 236 aa4.76□□□□□ -1.65
PTPN9-203ENST00000563835 FSIP2Q5CZC0 6907 aa4.76□□□□□ -1.65
PTPN9-203ENST00000563835 KRTAP16-1A8MUX0 517 aa4.75□□□□□ -1.65
PTPN9-203ENST00000563835 TRACP01848 142 aa4.75□□□□□ -1.65
PTPN9-203ENST00000563835 C9orf118A6NHY6 69 aa4.74□□□□□ -1.65
PTPN9-203ENST00000563835 UBE2V1Q13404 147 aa4.74□□□□□ -1.65
PTPN9-203ENST00000563835 VPS25Q9BRG1 176 aa4.74□□□□□ -1.65
PTPN9-203ENST00000563835 H3BQ85 93 aa4.73□□□□□ -1.65
PTPN9-203ENST00000563835 SCGB1C2P0DMR2 95 aa4.73□□□□□ -1.65
PTPN9-203ENST00000563835 LINC00472Q9H8W2 130 aa4.73□□□□□ -1.65
PTPN9-203ENST00000563835 A0A1W2PPM0 123 aa4.72□□□□□ -1.65
PTPN9-203ENST00000563835 IGHV6-1A0A0B4J1U7 121 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms