RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 ARL17AQ8IVW1 177 aa5.72□□□□□ -1.49
SF3B3-204ENST00000563739 NCR3O14931 201 aa5.71□□□□□ -1.5
SF3B3-204ENST00000563739 LINC00337Q8N6G1 96 aa5.71□□□□□ -1.5
SF3B3-204ENST00000563739 SPRR4Q96PI1 79 aa5.71□□□□□ -1.5
SF3B3-204ENST00000563739 FAM19A1Q7Z5A9 133 aa5.7□□□□□ -1.5
SF3B3-204ENST00000563739 Q8NBF4 154 aa5.7□□□□□ -1.5
SF3B3-204ENST00000563739 TRBV20-1A0A075B6N2 111 aa5.69□□□□□ -1.5
SF3B3-204ENST00000563739 NDUFC2O95298 119 aa5.69□□□□□ -1.5
SF3B3-204ENST00000563739 PSMB2P49721 201 aa5.69□□□□□ -1.5
SF3B3-204ENST00000563739 SPAG11AQ6PDA7 123 aa5.69□□□□□ -1.5
SF3B3-204ENST00000563739 TRBV10-2A0A0K0K1G8 114 aa5.68□□□□□ -1.5
SF3B3-204ENST00000563739 H7C2G1 150 aa5.68□□□□□ -1.5
SF3B3-204ENST00000563739 SCGB1C2P0DMR2 95 aa5.68□□□□□ -1.5
SF3B3-204ENST00000563739 Q1RN00 199 aa5.68□□□□□ -1.5
SF3B3-204ENST00000563739 Q8N377 158 aa5.68□□□□□ -1.5
SF3B3-204ENST00000563739 TRBV10-3A0A0K0K1G6 114 aa5.67□□□□□ -1.5
SF3B3-204ENST00000563739 F8W1H4 67 aa5.67□□□□□ -1.5
SF3B3-204ENST00000563739 H3BMG7 143 aa5.67□□□□□ -1.5
SF3B3-204ENST00000563739 PRYO14603 147 aa5.67□□□□□ -1.5
SF3B3-204ENST00000563739 TCL1BO95988 128 aa5.67□□□□□ -1.5
SF3B3-204ENST00000563739 TRAV13-2A0A0B4J235 113 aa5.66□□□□□ -1.5
SF3B3-204ENST00000563739 TRIAP1O43715 76 aa5.66□□□□□ -1.5
SF3B3-204ENST00000563739 PRO0461Q9UI25 63 aa5.66□□□□□ -1.5
SF3B3-204ENST00000563739 IGLV6-57P01721 117 aa5.65□□□□□ -1.5
SF3B3-204ENST00000563739 COX6CP09669 75 aa5.65□□□□□ -1.5
SF3B3-204ENST00000563739 HIGD2AQ9BW72 106 aa5.65□□□□□ -1.5
SF3B3-204ENST00000563739 KCNQ1DNQ9H478 68 aa5.65□□□□□ -1.5
SF3B3-204ENST00000563739 SPRR1AP35321 89 aa5.64□□□□□ -1.51
SF3B3-204ENST00000563739 ATXN8Q156A1 80 aa5.64□□□□□ -1.51
SF3B3-204ENST00000563739 S100A7L2Q5SY68 101 aa5.63□□□□□ -1.51
SF3B3-204ENST00000563739 MACF1Q9UPN3 7388 aaKnown RBP5.63□□□□□ -1.51
SF3B3-204ENST00000563739 TRAV23DV6A0A075B6W5 121 aa5.62□□□□□ -1.51
SF3B3-204ENST00000563739 KRTAP4-16G5E9R7 235 aaPredicted RBP5.62□□□□□ -1.51
SF3B3-204ENST00000563739 SPINK1P00995 79 aa5.62□□□□□ -1.51
SF3B3-204ENST00000563739 LINC00483Q53H64 154 aa5.62□□□□□ -1.51
SF3B3-204ENST00000563739 PCOTHQ58A44 107 aa5.62□□□□□ -1.51
SF3B3-204ENST00000563739 ETDCA0A1B0GVM5 59 aa5.61□□□□□ -1.51
SF3B3-204ENST00000563739 LST1O00453 97 aa5.61□□□□□ -1.51
SF3B3-204ENST00000563739 RPS29P62273 56 aaKnown RBP5.61□□□□□ -1.51
SF3B3-204ENST00000563739 OCIAD2Q56VL3 154 aa5.61□□□□□ -1.51
SF3B3-204ENST00000563739 SMCR5Q8TEV8 140 aa5.61□□□□□ -1.51
SF3B3-204ENST00000563739 MTURNQ8N3F0 131 aa5.6□□□□□ -1.51
SF3B3-204ENST00000563739 OR13C6PQ8NH95 151 aa5.6□□□□□ -1.51
SF3B3-204ENST00000563739 SMIM11BQ8TCY0 68 aa5.6□□□□□ -1.51
SF3B3-204ENST00000563739 CLEC2BQ92478 149 aa5.6□□□□□ -1.51
SF3B3-204ENST00000563739 CBY1Q9Y3M2 126 aa5.6□□□□□ -1.51
SF3B3-204ENST00000563739 IGLV8-61A0A075B6I0 122 aa5.59□□□□□ -1.51
SF3B3-204ENST00000563739 B5MCH6 92 aa5.59□□□□□ -1.51
SF3B3-204ENST00000563739 C9JAW5 83 aa5.59□□□□□ -1.51
SF3B3-204ENST00000563739 ZNF73O43830 326 aaPredicted RBP5.59□□□□□ -1.51
SF3B3-204ENST00000563739 ETDBQ3ZM63 59 aa5.59□□□□□ -1.51
SF3B3-204ENST00000563739 K7ERU9 68 aa5.58□□□□□ -1.52
SF3B3-204ENST00000563739 SLC25A20O43772 301 aa5.58□□□□□ -1.52
SF3B3-204ENST00000563739 Q6ZRX8 168 aa5.58□□□□□ -1.52
SF3B3-204ENST00000563739 KRTAP4-8Q9BYQ9 185 aa5.58□□□□□ -1.52
SF3B3-204ENST00000563739 H0YGX0 51 aa5.57□□□□□ -1.52
SF3B3-204ENST00000563739 ERC2-IT1O76042 136 aa5.57□□□□□ -1.52
SF3B3-204ENST00000563739 TRACP01848 142 aa5.57□□□□□ -1.52
SF3B3-204ENST00000563739 MOBPQ13875 183 aa5.57□□□□□ -1.52
SF3B3-204ENST00000563739 ANKRD29Q8N6D5 301 aa5.57□□□□□ -1.52
SF3B3-204ENST00000563739 H3BT86 120 aa5.56□□□□□ -1.52
SF3B3-204ENST00000563739 TEN1Q86WV5 123 aa5.56□□□□□ -1.52
SF3B3-204ENST00000563739 Q9BRP9 147 aa5.56□□□□□ -1.52
SF3B3-204ENST00000563739 C6orf99Q4VX62 202 aa5.55□□□□□ -1.52
SF3B3-204ENST00000563739 FAM218AQ96MZ4 157 aa5.55□□□□□ -1.52
SF3B3-204ENST00000563739 ZNF706Q9Y5V0 76 aaPredicted RBP5.55□□□□□ -1.52
SF3B3-204ENST00000563739 ELOF1P60002 83 aaKnown RBP5.54□□□□□ -1.52
SF3B3-204ENST00000563739 C21orf62-AS1Q17RA5 79 aa5.54□□□□□ -1.52
SF3B3-204ENST00000563739 PPDPFLQ8WWR9 84 aa5.54□□□□□ -1.52
SF3B3-204ENST00000563739 IGLV9-49A0A0B4J1Y8 123 aa5.53□□□□□ -1.52
SF3B3-204ENST00000563739 J3QR89 54 aa5.53□□□□□ -1.52
SF3B3-204ENST00000563739 COX7BP24311 80 aa5.53□□□□□ -1.52
SF3B3-204ENST00000563739 TRBV7-6A0A0J9YX20 115 aa5.52□□□□□ -1.53
SF3B3-204ENST00000563739 A0A1B0GX51 115 aa5.51□□□□□ -1.53
SF3B3-204ENST00000563739 BAALC-AS2P0C853 105 aa5.51□□□□□ -1.53
SF3B3-204ENST00000563739 GAGE2AQ6NT46 116 aa5.51□□□□□ -1.53
SF3B3-204ENST00000563739 SSBP3-AS1Q7Z2R9 100 aa5.51□□□□□ -1.53
SF3B3-204ENST00000563739 KRTAP9-8Q9BYQ0 159 aa5.51□□□□□ -1.53
SF3B3-204ENST00000563739 DHRS4-AS1Q9P1J3 65 aa5.51□□□□□ -1.53
SF3B3-204ENST00000563739 C9orf92A6NGG3 77 aa5.5□□□□□ -1.53
SF3B3-204ENST00000563739 M0R2T5 61 aa5.5□□□□□ -1.53
SF3B3-204ENST00000563739 KRTAP19-4Q3LI73 84 aa5.5□□□□□ -1.53
SF3B3-204ENST00000563739 DNAL4O96015 105 aa5.49□□□□□ -1.53
SF3B3-204ENST00000563739 ST20-AS1Q8NBB2 130 aa5.49□□□□□ -1.53
SF3B3-204ENST00000563739 VPS25Q9BRG1 176 aa5.49□□□□□ -1.53
SF3B3-204ENST00000563739 NEBP20929 6669 aa5.49□□□□□ -1.53
SF3B3-204ENST00000563739 TEX49A0A1B0GTD5 131 aa5.48□□□□□ -1.53
SF3B3-204ENST00000563739 LINC00575Q6W349 94 aa5.48□□□□□ -1.53
SF3B3-204ENST00000563739 SNCGO76070 127 aa5.47□□□□□ -1.53
SF3B3-204ENST00000563739 hADV29S1A0JD25 119 aa5.46□□□□□ -1.54
SF3B3-204ENST00000563739 KRTAP19-1Q8IUB9 90 aa5.46□□□□□ -1.54
SF3B3-204ENST00000563739 KRTAP4-12Q9BQ66 201 aa5.46□□□□□ -1.54
SF3B3-204ENST00000563739 ORMDL1Q9P0S3 153 aa5.46□□□□□ -1.54
SF3B3-204ENST00000563739 SPRR1BP22528 89 aa5.45□□□□□ -1.54
SF3B3-204ENST00000563739 IGLV5-48A0A075B6I7 105 aa5.43□□□□□ -1.54
SF3B3-204ENST00000563739 TMEM256-PLSCR3K7ERE1 68 aa5.43□□□□□ -1.54
SF3B3-204ENST00000563739 RPL37P61927 97 aaKnown RBP5.43□□□□□ -1.54
SF3B3-204ENST00000563739 OBSCN-AS1Q96MR7 158 aa5.43□□□□□ -1.54
SF3B3-204ENST00000563739 H3BQ85 93 aa5.42□□□□□ -1.54
SF3B3-204ENST00000563739 C9orf153Q5TBE3 101 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms