RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 MOBPQ13875 183 aa11.07□□□□□ -0.64
RAB40C-207ENST00000563109 PPDPFLQ8WWR9 84 aa11.07□□□□□ -0.64
RAB40C-207ENST00000563109 Q8N377 158 aa11.06□□□□□ -0.64
RAB40C-207ENST00000563109 Q8NBF4 154 aa11.05□□□□□ -0.64
RAB40C-207ENST00000563109 TNXBP22105 4242 aa11.05□□□□□ -0.64
RAB40C-207ENST00000563109 H3BUT2 72 aa11.04□□□□□ -0.64
RAB40C-207ENST00000563109 COL5A1-AS1Q5SY13 56 aa11.04□□□□□ -0.64
RAB40C-207ENST00000563109 C9orf118A6NHY6 69 aa11.03□□□□□ -0.64
RAB40C-207ENST00000563109 F8WEM9 126 aa11.03□□□□□ -0.64
RAB40C-207ENST00000563109 LST1O00453 97 aa11.03□□□□□ -0.64
RAB40C-207ENST00000563109 TAX1BP3O14907 124 aa11.03□□□□□ -0.64
RAB40C-207ENST00000563109 DMBT1Q9UGM3 2413 aaPredicted RBP11.02□□□□□ -0.65
RAB40C-207ENST00000563109 TRACP01848 142 aa11.02□□□□□ -0.65
RAB40C-207ENST00000563109 SSBP3-AS1Q7Z2R9 100 aa11.02□□□□□ -0.65
RAB40C-207ENST00000563109 SMIM29Q86T20 159 aa11.02□□□□□ -0.65
RAB40C-207ENST00000563109 LINC00304Q8N9R0 145 aa11.02□□□□□ -0.65
RAB40C-207ENST00000563109 ATXN8Q156A1 80 aa11.01□□□□□ -0.65
RAB40C-207ENST00000563109 ORMDL1Q9P0S3 153 aa11.01□□□□□ -0.65
RAB40C-207ENST00000563109 H3BQ85 93 aa11□□□□□ -0.65
RAB40C-207ENST00000563109 C4orf48Q5BLP8 95 aa10.98□□□□□ -0.65
RAB40C-207ENST00000563109 TRBV20-1A0A075B6N2 111 aa10.97□□□□□ -0.65
RAB40C-207ENST00000563109 TCL1BO95988 128 aa10.97□□□□□ -0.65
RAB40C-207ENST00000563109 FABP2P12104 132 aa10.97□□□□□ -0.65
RAB40C-207ENST00000563109 A0A1W2PPM0 123 aa10.96□□□□□ -0.65
RAB40C-207ENST00000563109 SPAG11AQ6PDA7 123 aa10.96□□□□□ -0.65
RAB40C-207ENST00000563109 TMEM256-PLSCR3K7ERE1 68 aa10.93□□□□□ -0.66
RAB40C-207ENST00000563109 NDUFV3P56181 108 aaKnown RBP10.92□□□□□ -0.66
RAB40C-207ENST00000563109 Q6JHZ5 121 aa10.9□□□□□ -0.66
RAB40C-207ENST00000563109 IGLV8-61A0A075B6I0 122 aa10.89□□□□□ -0.67
RAB40C-207ENST00000563109 SPINK1P00995 79 aa10.89□□□□□ -0.67
RAB40C-207ENST00000563109 BAALC-AS2P0C853 105 aa10.87□□□□□ -0.67
RAB40C-207ENST00000563109 UBE2V1Q13404 147 aa10.87□□□□□ -0.67
RAB40C-207ENST00000563109 SPCS1Q9Y6A9 102 aa10.87□□□□□ -0.67
RAB40C-207ENST00000563109 H3BMG7 143 aa10.86□□□□□ -0.67
RAB40C-207ENST00000563109 C9JAW5 83 aa10.85□□□□□ -0.67
RAB40C-207ENST00000563109 CD164Q04900 197 aa10.85□□□□□ -0.67
RAB40C-207ENST00000563109 HRCT1Q6UXD1 115 aa10.85□□□□□ -0.67
RAB40C-207ENST00000563109 RPS29P62273 56 aaKnown RBP10.84□□□□□ -0.67
RAB40C-207ENST00000563109 IGFL1Q6UW32 110 aa10.84□□□□□ -0.67
RAB40C-207ENST00000563109 ANKRD29Q8N6D5 301 aa10.84□□□□□ -0.67
RAB40C-207ENST00000563109 A0A0G2JQZ4 141 aa10.82□□□□□ -0.68
RAB40C-207ENST00000563109 LIMD2Q9BT23 127 aa10.82□□□□□ -0.68
RAB40C-207ENST00000563109 A0A1B0GV72 72 aa10.81□□□□□ -0.68
RAB40C-207ENST00000563109 H3BT86 120 aa10.78□□□□□ -0.68
RAB40C-207ENST00000563109 K7EP34 96 aa10.78□□□□□ -0.68
RAB40C-207ENST00000563109 HERC1Q15751 4861 aa10.77□□□□□ -0.69
RAB40C-207ENST00000563109 A0A1B0GV90 55 aa10.76□□□□□ -0.69
RAB40C-207ENST00000563109 RBM3P98179 157 aaKnown RBP10.76□□□□□ -0.69
RAB40C-207ENST00000563109 GTF2H5Q6ZYL4 71 aa10.75□□□□□ -0.69
RAB40C-207ENST00000563109 JMJD7-PLA2G4BH0Y9G9 81 aa10.74□□□□□ -0.69
RAB40C-207ENST00000563109 MTURNQ8N3F0 131 aa10.74□□□□□ -0.69
RAB40C-207ENST00000563109 DSCR8Q96T75 97 aa10.74□□□□□ -0.69
RAB40C-207ENST00000563109 RETNLBQ9BQ08 111 aa10.74□□□□□ -0.69
RAB40C-207ENST00000563109 TRBV7-7A0A0K0K1E9 115 aa10.73□□□□□ -0.69
RAB40C-207ENST00000563109 PRR4Q16378 134 aa10.73□□□□□ -0.69
RAB40C-207ENST00000563109 TEN1Q86WV5 123 aa10.73□□□□□ -0.69
RAB40C-207ENST00000563109 Q6Q795 121 aa10.72□□□□□ -0.69
RAB40C-207ENST00000563109 Q5XG85 94 aa10.7□□□□□ -0.7
RAB40C-207ENST00000563109 TRBV7-4A0A0J9YYF1 115 aa10.69□□□□□ -0.7
RAB40C-207ENST00000563109 A0A1W2PNM2 257 aa10.67□□□□□ -0.7
RAB40C-207ENST00000563109 CCKP06307 115 aa10.67□□□□□ -0.7
RAB40C-207ENST00000563109 FP248Q71RG6 208 aaPredicted RBP10.67□□□□□ -0.7
RAB40C-207ENST00000563109 SS18L2Q9UHA2 77 aa10.67□□□□□ -0.7
RAB40C-207ENST00000563109 VPS25Q9BRG1 176 aa10.66□□□□□ -0.7
RAB40C-207ENST00000563109 A0A087WSZ3 146 aa10.64□□□□□ -0.71
RAB40C-207ENST00000563109 PDE6GP18545 87 aa10.64□□□□□ -0.71
RAB40C-207ENST00000563109 OBSCN-AS1Q96MR7 158 aa10.64□□□□□ -0.71
RAB40C-207ENST00000563109 LOC110117498A0A087WWA1 95 aa10.63□□□□□ -0.71
RAB40C-207ENST00000563109 C14orf132Q9NPU4 83 aa10.63□□□□□ -0.71
RAB40C-207ENST00000563109 PRO0461Q9UI25 63 aa10.63□□□□□ -0.71
RAB40C-207ENST00000563109 IGLV7-46A0A075B6I9 117 aa10.62□□□□□ -0.71
RAB40C-207ENST00000563109 C21orf62-AS1Q17RA5 79 aa10.62□□□□□ -0.71
RAB40C-207ENST00000563109 SMCPP49901 116 aaPredicted RBP10.61□□□□□ -0.71
RAB40C-207ENST00000563109 ASB16-AS1Q495Z4 193 aa10.61□□□□□ -0.71
RAB40C-207ENST00000563109 Q6ZQT0 140 aa10.6□□□□□ -0.71
RAB40C-207ENST00000563109 HMCN2Q8NDA2 5059 aa10.59□□□□□ -0.71
RAB40C-207ENST00000563109 F8W1H4 67 aa10.59□□□□□ -0.71
RAB40C-207ENST00000563109 C1orf195Q5TG92 126 aa10.59□□□□□ -0.71
RAB40C-207ENST00000563109 A0A1B0GW54 56 aa10.53□□□□□ -0.72
RAB40C-207ENST00000563109 TPRXLQ17RH7 258 aa10.52□□□□□ -0.73
RAB40C-207ENST00000563109 KRTAP13-3Q3SY46 172 aa10.46□□□□□ -0.73
RAB40C-207ENST00000563109 ETDBQ3ZM63 59 aa10.46□□□□□ -0.73
RAB40C-207ENST00000563109 CDIP1Q9H305 208 aa10.46□□□□□ -0.73
RAB40C-207ENST00000563109 Q96NJ1 140 aa10.45□□□□□ -0.74
RAB40C-207ENST00000563109 SIGMAR1Q99720 223 aa10.45□□□□□ -0.74
RAB40C-207ENST00000563109 IGKV4-1P06312 121 aa10.42□□□□□ -0.74
RAB40C-207ENST00000563109 LINC00472Q9H8W2 130 aa10.41□□□□□ -0.74
RAB40C-207ENST00000563109 C9orf92A6NGG3 77 aa10.39□□□□□ -0.75
RAB40C-207ENST00000563109 NREPQ16612 68 aa10.39□□□□□ -0.75
RAB40C-207ENST00000563109 LPAP08519 4548 aa10.38□□□□□ -0.75
RAB40C-207ENST00000563109 J3KT08 172 aa10.38□□□□□ -0.75
RAB40C-207ENST00000563109 DEFB116Q30KQ4 102 aa10.38□□□□□ -0.75
RAB40C-207ENST00000563109 LRP2P98164 4655 aa10.33□□□□□ -0.76
RAB40C-207ENST00000563109 XP32Q5T750 250 aa10.31□□□□□ -0.76
RAB40C-207ENST00000563109 UBL5Q9BZL1 73 aa10.3□□□□□ -0.76
RAB40C-207ENST00000563109 NDUFB1O75438 58 aa10.29□□□□□ -0.76
RAB40C-207ENST00000563109 Q6ZVQ6 151 aa10.29□□□□□ -0.76
RAB40C-207ENST00000563109 LINC00846Q9NV44 126 aa10.28□□□□□ -0.76
RAB40C-207ENST00000563109 IGHV6-1A0A0B4J1U7 121 aa10.27□□□□□ -0.77
RAB40C-207ENST00000563109 A0A1B0GVX0 72 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms