RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 S100ZQ8WXG8 99 aa1.14□□□□□ -2.23
HDGFL3-202ENST00000562702 ST20Q9HBF5 79 aa1.14□□□□□ -2.23
HDGFL3-202ENST00000562702 NXT2Q9NPJ8 142 aaKnown RBP1.14□□□□□ -2.23
HDGFL3-202ENST00000562702 TMEM14CQ9P0S9 112 aa1.14□□□□□ -2.23
HDGFL3-202ENST00000562702 APOBP04114 4563 aaKnown RBP1.14□□□□□ -2.23
HDGFL3-202ENST00000562702 TRGV4A0A0C4DH28 118 aa1.13□□□□□ -2.23
HDGFL3-202ENST00000562702 TRBV6-4A0A1B0GX49 114 aa1.13□□□□□ -2.23
HDGFL3-202ENST00000562702 IGLC7A0M8Q6 106 aa1.13□□□□□ -2.23
HDGFL3-202ENST00000562702 NUPR2A6NF83 97 aa1.13□□□□□ -2.23
HDGFL3-202ENST00000562702 HIGD1CA8MV81 97 aa1.13□□□□□ -2.23
HDGFL3-202ENST00000562702 HCG22E2RYF7 251 aa1.13□□□□□ -2.23
HDGFL3-202ENST00000562702 JMJD7-PLA2G4BH0Y9G9 81 aa1.13□□□□□ -2.23
HDGFL3-202ENST00000562702 H3BRN7 92 aa1.13□□□□□ -2.23
HDGFL3-202ENST00000562702 NUPR1O60356 82 aa1.13□□□□□ -2.23
HDGFL3-202ENST00000562702 NDUFA3O95167 84 aa1.13□□□□□ -2.23
HDGFL3-202ENST00000562702 SIX6O95475 246 aa1.13□□□□□ -2.23
HDGFL3-202ENST00000562702 ACYP1P07311 99 aa1.13□□□□□ -2.23
HDGFL3-202ENST00000562702 ZNF137PP52743 207 aa1.13□□□□□ -2.23
HDGFL3-202ENST00000562702 HMGN3Q15651 99 aa1.13□□□□□ -2.23
HDGFL3-202ENST00000562702 DEFB135Q30KP9 77 aa1.13□□□□□ -2.23
HDGFL3-202ENST00000562702 RPL39P5Q59GN2 51 aa1.13□□□□□ -2.23
HDGFL3-202ENST00000562702 C10orf55Q5SWW7 151 aa1.13□□□□□ -2.23
HDGFL3-202ENST00000562702 ALKAL2Q6UX46 152 aa1.13□□□□□ -2.23
HDGFL3-202ENST00000562702 DEFB107AQ8IZN7 70 aa1.13□□□□□ -2.23
HDGFL3-202ENST00000562702 IFI27L1Q96BM0 104 aa1.13□□□□□ -2.23
HDGFL3-202ENST00000562702 FAM167A-AS1Q96KT0 104 aa1.13□□□□□ -2.23
HDGFL3-202ENST00000562702 TXNDC17Q9BRA2 123 aa1.13□□□□□ -2.23
HDGFL3-202ENST00000562702 LIMD2Q9BT23 127 aa1.13□□□□□ -2.23
HDGFL3-202ENST00000562702 MRPL36Q9P0J6 103 aaKnown RBP1.13□□□□□ -2.23
HDGFL3-202ENST00000562702 APLNQ9ULZ1 77 aa1.13□□□□□ -2.23
HDGFL3-202ENST00000562702 LENEPQ9Y5L5 61 aa1.13□□□□□ -2.23
HDGFL3-202ENST00000562702 RNF213Q63HN8 5207 aa1.13□□□□□ -2.23
HDGFL3-202ENST00000562702 LRP1BQ9NZR2 4599 aa1.12□□□□□ -2.23
HDGFL3-202ENST00000562702 A0A1W2PPM0 123 aa1.12□□□□□ -2.23
HDGFL3-202ENST00000562702 NMBP08949 121 aa1.12□□□□□ -2.23
HDGFL3-202ENST00000562702 SAA2P0DJI9 122 aaPredicted RBP1.12□□□□□ -2.23
HDGFL3-202ENST00000562702 SSBP1Q04837 148 aaKnown RBP1.12□□□□□ -2.23
HDGFL3-202ENST00000562702 FXYD3Q14802 87 aa1.12□□□□□ -2.23
HDGFL3-202ENST00000562702 PSMG4Q5JS54 123 aa1.12□□□□□ -2.23
HDGFL3-202ENST00000562702 TMEM170BQ5T4T1 132 aa1.12□□□□□ -2.23
HDGFL3-202ENST00000562702 SNURFQ9Y675 71 aa1.12□□□□□ -2.23
HDGFL3-202ENST00000562702 V9GYH0 126 aa1.12□□□□□ -2.23
HDGFL3-202ENST00000562702 MYCBP2O75592 4640 aa1.12□□□□□ -2.23
HDGFL3-202ENST00000562702 DNAH5Q8TE73 4624 aa1.11□□□□□ -2.23
HDGFL3-202ENST00000562702 AHNAKQ09666 5890 aaKnown RBP1.11□□□□□ -2.23
HDGFL3-202ENST00000562702 HMCN2Q8NDA2 5059 aa1.11□□□□□ -2.23
HDGFL3-202ENST00000562702 TRBV7-3A0A075B6L6 115 aa1.11□□□□□ -2.23
HDGFL3-202ENST00000562702 A0A0J9YY99 117 aa1.11□□□□□ -2.23
HDGFL3-202ENST00000562702 ZNF815PA8K554 130 aa1.11□□□□□ -2.23
HDGFL3-202ENST00000562702 CHKB-CPT1BH3BT56 60 aa1.11□□□□□ -2.23
HDGFL3-202ENST00000562702 BCE1O60756 84 aa1.11□□□□□ -2.23
HDGFL3-202ENST00000562702 UBE2D1P51668 147 aa1.11□□□□□ -2.23
HDGFL3-202ENST00000562702 DEFB1P60022 68 aa1.11□□□□□ -2.23
HDGFL3-202ENST00000562702 RPL37AP61513 92 aaKnown RBP1.11□□□□□ -2.23
HDGFL3-202ENST00000562702 HAMPP81172 84 aa1.11□□□□□ -2.23
HDGFL3-202ENST00000562702 ETDBQ3ZM63 59 aa1.11□□□□□ -2.23
HDGFL3-202ENST00000562702 C6orf201Q7Z4U5 140 aa1.11□□□□□ -2.23
HDGFL3-202ENST00000562702 C20orf78Q9BR46 151 aa1.11□□□□□ -2.23
HDGFL3-202ENST00000562702 VPS13BQ7Z7G8 4022 aa1.11□□□□□ -2.23
HDGFL3-202ENST00000562702 FAT1Q14517 4588 aa1.1□□□□□ -2.23
HDGFL3-202ENST00000562702 IGKV3-7A0A075B6H7 116 aa1.1□□□□□ -2.23
HDGFL3-202ENST00000562702 A0A0G2JQZ4 141 aa1.1□□□□□ -2.23
HDGFL3-202ENST00000562702 TRBV6-5A0A0K0K1A5 114 aa1.1□□□□□ -2.23
HDGFL3-202ENST00000562702 F2Z2F3 143 aa1.1□□□□□ -2.23
HDGFL3-202ENST00000562702 PPP1R17O96001 155 aa1.1□□□□□ -2.23
HDGFL3-202ENST00000562702 KRTAP12-1P59990 96 aa1.1□□□□□ -2.23
HDGFL3-202ENST00000562702 UBE2D3P61077 147 aa1.1□□□□□ -2.23
HDGFL3-202ENST00000562702 UBE2D2P62837 147 aa1.1□□□□□ -2.23
HDGFL3-202ENST00000562702 PLGLAQ15195 96 aa1.1□□□□□ -2.23
HDGFL3-202ENST00000562702 ZNF56Q15929 161 aa1.1□□□□□ -2.23
HDGFL3-202ENST00000562702 SPATA45Q537H7 98 aa1.1□□□□□ -2.23
HDGFL3-202ENST00000562702 CSAG1Q6PB30 78 aa1.1□□□□□ -2.23
HDGFL3-202ENST00000562702 DMBT1Q9UGM3 2413 aaPredicted RBP1.1□□□□□ -2.23
HDGFL3-202ENST00000562702 TRBV6-7A0A0A0MS04 114 aa1.09□□□□□ -2.23
HDGFL3-202ENST00000562702 H3BUA1 57 aa1.09□□□□□ -2.23
HDGFL3-202ENST00000562702 MRPS14O60783 128 aaKnown RBP1.09□□□□□ -2.23
HDGFL3-202ENST00000562702 IGHV3-30P01768 117 aa1.09□□□□□ -2.23
HDGFL3-202ENST00000562702 SMR3BP02814 79 aaPredicted RBP1.09□□□□□ -2.23
HDGFL3-202ENST00000562702 IGHV3-30-5P0DP03 117 aa1.09□□□□□ -2.23
HDGFL3-202ENST00000562702 PDE6GP18545 87 aa1.09□□□□□ -2.23
HDGFL3-202ENST00000562702 SNRPGP62308 76 aaKnown RBP1.09□□□□□ -2.23
HDGFL3-202ENST00000562702 GNGT1P63211 74 aa1.09□□□□□ -2.23
HDGFL3-202ENST00000562702 SPAG11BQ08648 103 aa1.09□□□□□ -2.23
HDGFL3-202ENST00000562702 KLKP1Q107X0 134 aa1.09□□□□□ -2.23
HDGFL3-202ENST00000562702 COX17Q14061 63 aa1.09□□□□□ -2.23
HDGFL3-202ENST00000562702 SPAG11AQ6PDA7 123 aa1.09□□□□□ -2.23
HDGFL3-202ENST00000562702 KRTAP26-1Q6PEX3 210 aa1.09□□□□□ -2.23
HDGFL3-202ENST00000562702 LINC00643Q86TS7 51 aa1.09□□□□□ -2.23
HDGFL3-202ENST00000562702 COA5Q86WW8 74 aa1.09□□□□□ -2.23
HDGFL3-202ENST00000562702 C20orf197Q8N268 126 aa1.09□□□□□ -2.23
HDGFL3-202ENST00000562702 C9orf163Q8N9P6 203 aa1.09□□□□□ -2.23
HDGFL3-202ENST00000562702 ARHGAP5-AS1Q96IT6 56 aa1.09□□□□□ -2.23
HDGFL3-202ENST00000562702 USMG5Q96IX5 58 aa1.09□□□□□ -2.23
HDGFL3-202ENST00000562702 ODF3Q96PU9 254 aa1.09□□□□□ -2.23
HDGFL3-202ENST00000562702 AMELXQ99217 191 aa1.09□□□□□ -2.23
HDGFL3-202ENST00000562702 NDUFA4L2Q9NRX3 87 aa1.09□□□□□ -2.23
HDGFL3-202ENST00000562702 V9GYV3 84 aa1.09□□□□□ -2.23
HDGFL3-202ENST00000562702 SRRM2Q9UQ35 2752 aaKnown RBP1.09□□□□□ -2.24
HDGFL3-202ENST00000562702 PKHD1L1Q86WI1 4243 aa1.08□□□□□ -2.24
HDGFL3-202ENST00000562702 TRBV25-1A0A075B6N4 114 aa1.08□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms