RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 ANK2Q01484 3957 aa8.8□□□□□ -1
VPS9D1-202ENST00000561976 UBE2AP49459 152 aa8.8□□□□□ -1
VPS9D1-202ENST00000561976 NDUFB1O75438 58 aa8.79□□□□□ -1
VPS9D1-202ENST00000561976 MAST4O15021 2626 aa8.78□□□□□ -1
VPS9D1-202ENST00000561976 Q1T7F1 81 aa8.78□□□□□ -1
VPS9D1-202ENST00000561976 LINC00208Q96KT6 92 aa8.78□□□□□ -1
VPS9D1-202ENST00000561976 CYP4F30PQ9H0H9 118 aa8.78□□□□□ -1
VPS9D1-202ENST00000561976 STAB1Q9NY15 2570 aa8.77□□□□□ -1.01
VPS9D1-202ENST00000561976 NOTCH1P46531 2555 aa8.77□□□□□ -1.01
VPS9D1-202ENST00000561976 C16orf90A8MZG2 172 aa8.76□□□□□ -1.01
VPS9D1-202ENST00000561976 PSPHP1O15172 72 aa8.76□□□□□ -1.01
VPS9D1-202ENST00000561976 IGLV8-61A0A075B6I0 122 aa8.76□□□□□ -1.01
VPS9D1-202ENST00000561976 PRR15Q8IV56 129 aa8.76□□□□□ -1.01
VPS9D1-202ENST00000561976 TRAV22A0A0B4J277 110 aa8.74□□□□□ -1.01
VPS9D1-202ENST00000561976 CD164Q04900 197 aa8.74□□□□□ -1.01
VPS9D1-202ENST00000561976 KRTAP24-1Q3LI83 254 aa8.74□□□□□ -1.01
VPS9D1-202ENST00000561976 CASC2Q6XLA1 102 aa8.74□□□□□ -1.01
VPS9D1-202ENST00000561976 H0Y9P7 68 aa8.73□□□□□ -1.01
VPS9D1-202ENST00000561976 KRTAP29-1A8MX34 341 aaPredicted RBP8.72□□□□□ -1.01
VPS9D1-202ENST00000561976 PHF5AQ7RTV0 110 aaKnown RBP8.71□□□□□ -1.01
VPS9D1-202ENST00000561976 B9D2Q9BPU9 175 aa8.71□□□□□ -1.01
VPS9D1-202ENST00000561976 CHTF8P0CG12 524 aa8.7□□□□□ -1.02
VPS9D1-202ENST00000561976 CNBPP62633 177 aaKnown RBP8.69□□□□□ -1.02
VPS9D1-202ENST00000561976 KRTAP1-5Q9BYS1 174 aa8.69□□□□□ -1.02
VPS9D1-202ENST00000561976 KRTAP11-1Q8IUC1 163 aa8.68□□□□□ -1.02
VPS9D1-202ENST00000561976 FBN1P35555 2871 aaKnown RBP8.68□□□□□ -1.02
VPS9D1-202ENST00000561976 A8MWP4 228 aa8.67□□□□□ -1.02
VPS9D1-202ENST00000561976 DNAH1Q9P2D7 4330 aa8.67□□□□□ -1.02
VPS9D1-202ENST00000561976 SRRM2Q9UQ35 2752 aaKnown RBP8.67□□□□□ -1.02
VPS9D1-202ENST00000561976 H0Y9J4 135 aa8.67□□□□□ -1.02
VPS9D1-202ENST00000561976 NBEAL1Q6ZS30 2694 aa8.66□□□□□ -1.02
VPS9D1-202ENST00000561976 A8MUN3 132 aa8.66□□□□□ -1.02
VPS9D1-202ENST00000561976 H3BPC8 53 aa8.65□□□□□ -1.02
VPS9D1-202ENST00000561976 LINC00472Q9H8W2 130 aa8.65□□□□□ -1.02
VPS9D1-202ENST00000561976 COL6A5A8TX70 2615 aa8.65□□□□□ -1.02
VPS9D1-202ENST00000561976 UBE2DNLQ8IWF7 75 aa8.65□□□□□ -1.03
VPS9D1-202ENST00000561976 SPRR1BP22528 89 aa8.64□□□□□ -1.03
VPS9D1-202ENST00000561976 SPANXA2-OT1Q8N9U9 137 aa8.64□□□□□ -1.03
VPS9D1-202ENST00000561976 CMYA5Q8N3K9 4069 aa8.62□□□□□ -1.03
VPS9D1-202ENST00000561976 K7EIL1 84 aa8.61□□□□□ -1.03
VPS9D1-202ENST00000561976 C14orf177Q52M58 125 aa8.61□□□□□ -1.03
VPS9D1-202ENST00000561976 DNAH10Q8IVF4 4471 aa8.58□□□□□ -1.04
VPS9D1-202ENST00000561976 MMP24-AS1A0A0U1RRL7 71 aa8.58□□□□□ -1.04
VPS9D1-202ENST00000561976 Q5VV11 94 aa8.57□□□□□ -1.04
VPS9D1-202ENST00000561976 C9orf163Q8N9P6 203 aa8.57□□□□□ -1.04
VPS9D1-202ENST00000561976 DNAH3Q8TD57 4116 aa8.57□□□□□ -1.04
VPS9D1-202ENST00000561976 Q8N9P0 234 aaPredicted RBP8.56□□□□□ -1.04
VPS9D1-202ENST00000561976 IGLV9-49A0A0B4J1Y8 123 aa8.56□□□□□ -1.04
VPS9D1-202ENST00000561976 CHKB-CPT1BH3BT56 60 aa8.56□□□□□ -1.04
VPS9D1-202ENST00000561976 LIMD2Q9BT23 127 aa8.56□□□□□ -1.04
VPS9D1-202ENST00000561976 PRR15LQ9BU68 103 aa8.55□□□□□ -1.04
VPS9D1-202ENST00000561976 RBM12B-AS1Q9P1G2 102 aa8.55□□□□□ -1.04
VPS9D1-202ENST00000561976 PCOTHQ58A44 107 aa8.54□□□□□ -1.04
VPS9D1-202ENST00000561976 HUWE1Q7Z6Z7 4374 aaKnown RBP8.53□□□□□ -1.04
VPS9D1-202ENST00000561976 C4orf48Q5BLP8 95 aa8.53□□□□□ -1.04
VPS9D1-202ENST00000561976 COA5Q86WW8 74 aa8.53□□□□□ -1.04
VPS9D1-202ENST00000561976 A8MU10 97 aa8.52□□□□□ -1.05
VPS9D1-202ENST00000561976 STAB2Q8WWQ8 2551 aa8.52□□□□□ -1.05
VPS9D1-202ENST00000561976 LYSTQ99698 3801 aa8.52□□□□□ -1.05
VPS9D1-202ENST00000561976 PANO1I0J062 215 aa8.51□□□□□ -1.05
VPS9D1-202ENST00000561976 APLNQ9ULZ1 77 aa8.51□□□□□ -1.05
VPS9D1-202ENST00000561976 IGLV7-46A0A075B6I9 117 aa8.5□□□□□ -1.05
VPS9D1-202ENST00000561976 KTN1-AS1Q86SY8 53 aa8.5□□□□□ -1.05
VPS9D1-202ENST00000561976 NDUFS5O43920 106 aa8.5□□□□□ -1.05
VPS9D1-202ENST00000561976 KRTAP13-1Q8IUC0 172 aa8.49□□□□□ -1.05
VPS9D1-202ENST00000561976 TP53AIP1Q9HCN2 124 aa8.49□□□□□ -1.05
VPS9D1-202ENST00000561976 Q96NJ1 140 aa8.48□□□□□ -1.05
VPS9D1-202ENST00000561976 CSMD3Q7Z407 3707 aa8.48□□□□□ -1.05
VPS9D1-202ENST00000561976 MOBPQ13875 183 aa8.48□□□□□ -1.05
VPS9D1-202ENST00000561976 SPTSSBQ8NFR3 76 aa8.48□□□□□ -1.05
VPS9D1-202ENST00000561976 IGHV6-1A0A0B4J1U7 121 aa8.47□□□□□ -1.05
VPS9D1-202ENST00000561976 C8orf17Q9NRJ1 99 aa8.47□□□□□ -1.05
VPS9D1-202ENST00000561976 DNAH9Q9NYC9 4486 aa8.47□□□□□ -1.05
VPS9D1-202ENST00000561976 MGAM2Q2M2H8 2515 aa8.46□□□□□ -1.05
VPS9D1-202ENST00000561976 TENM2Q9NT68 2774 aa8.45□□□□□ -1.06
VPS9D1-202ENST00000561976 CDK2AP2O75956 126 aa8.45□□□□□ -1.06
VPS9D1-202ENST00000561976 A6NED7 52 aa8.44□□□□□ -1.06
VPS9D1-202ENST00000561976 NBDYA0A0U1RRE5 68 aa8.44□□□□□ -1.06
VPS9D1-202ENST00000561976 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.44□□□□□ -1.06
VPS9D1-202ENST00000561976 ASB16-AS1Q495Z4 193 aa8.43□□□□□ -1.06
VPS9D1-202ENST00000561976 COL7A1Q02388 2944 aa8.42□□□□□ -1.06
VPS9D1-202ENST00000561976 A0A1B0GVX0 72 aa8.42□□□□□ -1.06
VPS9D1-202ENST00000561976 Q75L30 129 aa8.42□□□□□ -1.06
VPS9D1-202ENST00000561976 Q6ZR54 194 aa8.41□□□□□ -1.06
VPS9D1-202ENST00000561976 SPAG11AQ6PDA7 123 aa8.41□□□□□ -1.06
VPS9D1-202ENST00000561976 LOC101927531A0A1B0GV80 90 aa8.4□□□□□ -1.06
VPS9D1-202ENST00000561976 SPACA4Q8TDM5 124 aa8.4□□□□□ -1.06
VPS9D1-202ENST00000561976 LINC00483Q53H64 154 aa8.39□□□□□ -1.07
VPS9D1-202ENST00000561976 MRPL34Q9BQ48 92 aaKnown RBP8.39□□□□□ -1.07
VPS9D1-202ENST00000561976 ANAPC11Q9NYG5 84 aa8.39□□□□□ -1.07
VPS9D1-202ENST00000561976 ZNF706Q9Y5V0 76 aaPredicted RBP8.39□□□□□ -1.07
VPS9D1-202ENST00000561976 MDFIQ99750 246 aa8.39□□□□□ -1.07
VPS9D1-202ENST00000561976 Q6ZRN7 208 aaPredicted RBP8.38□□□□□ -1.07
VPS9D1-202ENST00000561976 LCA10Q71F78 164 aa8.38□□□□□ -1.07
VPS9D1-202ENST00000561976 WWC2-AS2Q96NR7 200 aa8.37□□□□□ -1.07
VPS9D1-202ENST00000561976 A0A087X002 238 aa8.35□□□□□ -1.07
VPS9D1-202ENST00000561976 NOTCH2NLQ7Z3S9 236 aa8.35□□□□□ -1.07
VPS9D1-202ENST00000561976 PSORS1C2Q9UIG4 136 aa8.35□□□□□ -1.07
VPS9D1-202ENST00000561976 HRES1P13985 223 aa8.34□□□□□ -1.07
VPS9D1-202ENST00000561976 LINC01558Q9Y6Z2 57 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms