RNA–Protein interactions for RNA: ENST00000561377.1

HMBOX1-216, Transcript of homeobox containing 1, humanhuman

TSL 5

Gene HMBOX1, Length 307 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-216ENST00000561377 S4R3F8 94 aa-0.73□□□□□ -2.53
HMBOX1-216ENST00000561377 CCDC168Q8NDH2 2452 aa-0.73□□□□□ -2.53
HMBOX1-216ENST00000561377 ITPR1Q14643 2758 aa-0.74□□□□□ -2.53
HMBOX1-216ENST00000561377 THOC2Q8NI27 1593 aaKnown RBP-0.74□□□□□ -2.53
HMBOX1-216ENST00000561377 MYO3AQ8NEV4 1616 aa-0.74□□□□□ -2.53
HMBOX1-216ENST00000561377 SUPT6HQ7KZ85 1726 aaKnown RBP-0.74□□□□□ -2.53
HMBOX1-216ENST00000561377 IQCF6A8MYZ5 107 aa-0.74□□□□□ -2.53
HMBOX1-216ENST00000561377 HMGN2P05204 90 aaKnown RBP-0.74□□□□□ -2.53
HMBOX1-216ENST00000561377 DNAH8Q96JB1 4490 aa-0.74□□□□□ -2.53
HMBOX1-216ENST00000561377 SACSQ9NZJ4 4579 aa-0.74□□□□□ -2.53
HMBOX1-216ENST00000561377 DNHD1Q96M86 4753 aa-0.74□□□□□ -2.53
HMBOX1-216ENST00000561377 LCE6AA0A183 80 aa-0.75□□□□□ -2.53
HMBOX1-216ENST00000561377 NDUFB1O75438 58 aa-0.75□□□□□ -2.53
HMBOX1-216ENST00000561377 MT-ATP8P03928 68 aa-0.75□□□□□ -2.53
HMBOX1-216ENST00000561377 LINC00158P58513 81 aa-0.75□□□□□ -2.53
HMBOX1-216ENST00000561377 DEFB110Q30KQ9 67 aa-0.75□□□□□ -2.53
HMBOX1-216ENST00000561377 DPY30Q9C005 99 aa-0.75□□□□□ -2.53
HMBOX1-216ENST00000561377 CCDC88BA6NC98 1476 aa-0.75□□□□□ -2.53
HMBOX1-216ENST00000561377 TLN2Q9Y4G6 2542 aa-0.75□□□□□ -2.53
HMBOX1-216ENST00000561377 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.75□□□□□ -2.53
HMBOX1-216ENST00000561377 POLR1AO95602 1720 aaPredicted RBP-0.75□□□□□ -2.53
HMBOX1-216ENST00000561377 RGPD3A6NKT7 1758 aaPredicted RBP-0.75□□□□□ -2.53
HMBOX1-216ENST00000561377 RGPD4Q7Z3J3 1758 aa-0.75□□□□□ -2.53
HMBOX1-216ENST00000561377 CEP295Q9C0D2 2601 aa-0.76□□□□□ -2.53
HMBOX1-216ENST00000561377 LINC00587B1AMM8 73 aa-0.76□□□□□ -2.53
HMBOX1-216ENST00000561377 FAUP35544 74 aaKnown RBP-0.76□□□□□ -2.53
HMBOX1-216ENST00000561377 DEFB1P60022 68 aa-0.76□□□□□ -2.53
HMBOX1-216ENST00000561377 TCEAL7Q9BRU2 100 aa-0.76□□□□□ -2.53
HMBOX1-216ENST00000561377 PLIN4Q96Q06 1357 aa-0.76□□□□□ -2.53
HMBOX1-216ENST00000561377 CEP162Q5TB80 1403 aa-0.76□□□□□ -2.53
HMBOX1-216ENST00000561377 RYR2Q92736 4967 aa-0.76□□□□□ -2.53
HMBOX1-216ENST00000561377 RGPD1P0DJD0 1748 aa-0.76□□□□□ -2.53
HMBOX1-216ENST00000561377 CNTLNQ9NXG0 1405 aa-0.77□□□□□ -2.53
HMBOX1-216ENST00000561377 LYNX1G3V0Z9 82 aa-0.77□□□□□ -2.53
HMBOX1-216ENST00000561377 S100A10P60903 97 aa-0.77□□□□□ -2.53
HMBOX1-216ENST00000561377 PEA15Q15121 130 aa-0.77□□□□□ -2.53
HMBOX1-216ENST00000561377 URB2Q14146 1524 aaKnown RBP-0.78□□□□□ -2.53
HMBOX1-216ENST00000561377 ABCC10Q5T3U5 1492 aa-0.78□□□□□ -2.53
HMBOX1-216ENST00000561377 BPTFQ12830 3046 aa-0.78□□□□□ -2.53
HMBOX1-216ENST00000561377 GYPAP02724 150 aa-0.78□□□□□ -2.53
HMBOX1-216ENST00000561377 ACBD7Q8N6N7 88 aa-0.78□□□□□ -2.53
HMBOX1-216ENST00000561377 WFDC9Q8NEX5 89 aa-0.78□□□□□ -2.53
HMBOX1-216ENST00000561377 LTN1O94822 1766 aa-0.78□□□□□ -2.53
HMBOX1-216ENST00000561377 SCN11AQ9UI33 1791 aa-0.78□□□□□ -2.53
HMBOX1-216ENST00000561377 COL12A1Q99715 3063 aa-0.79□□□□□ -2.54
HMBOX1-216ENST00000561377 CHD7Q9P2D1 2997 aa-0.79□□□□□ -2.54
HMBOX1-216ENST00000561377 TRAV21A0A0B4J279 112 aa-0.79□□□□□ -2.54
HMBOX1-216ENST00000561377 H0YAA0 97 aa-0.79□□□□□ -2.54
HMBOX1-216ENST00000561377 IFI6P09912 130 aa-0.79□□□□□ -2.54
HMBOX1-216ENST00000561377 S100PP25815 95 aa-0.79□□□□□ -2.54
HMBOX1-216ENST00000561377 KRTAP19-5Q3LI72 72 aa-0.79□□□□□ -2.54
HMBOX1-216ENST00000561377 DEFB106AQ8N104 65 aa-0.79□□□□□ -2.54
HMBOX1-216ENST00000561377 LRBAP50851 2863 aa-0.79□□□□□ -2.54
HMBOX1-216ENST00000561377 MYH4Q9Y623 1939 aa-0.79□□□□□ -2.54
HMBOX1-216ENST00000561377 IAPPP10997 89 aa-0.8□□□□□ -2.54
HMBOX1-216ENST00000561377 RBP2P50120 134 aa-0.8□□□□□ -2.54
HMBOX1-216ENST00000561377 DIP2BQ9P265 1576 aa-0.8□□□□□ -2.54
HMBOX1-216ENST00000561377 NEXMIFQ5QGS0 1516 aa-0.8□□□□□ -2.54
HMBOX1-216ENST00000561377 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.8□□□□□ -2.54
HMBOX1-216ENST00000561377 MYO9AB2RTY4 2548 aa-0.8□□□□□ -2.54
HMBOX1-216ENST00000561377 CSMD1Q96PZ7 3565 aa-0.81□□□□□ -2.54
HMBOX1-216ENST00000561377 MYMXA0A1B0GTQ4 84 aa-0.81□□□□□ -2.54
HMBOX1-216ENST00000561377 HMGA1P17096 107 aaKnown RBP-0.81□□□□□ -2.54
HMBOX1-216ENST00000561377 C14orf144Q96I85 54 aa-0.81□□□□□ -2.54
HMBOX1-216ENST00000561377 RABAC1Q9UI14 185 aa-0.81□□□□□ -2.54
HMBOX1-216ENST00000561377 DYNC1H1Q14204 4646 aaKnown RBP-0.81□□□□□ -2.54
HMBOX1-216ENST00000561377 DOT1LQ8TEK3 1739 aa-0.81□□□□□ -2.54
HMBOX1-216ENST00000561377 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.81□□□□□ -2.54
HMBOX1-216ENST00000561377 DEFB130BP0DP73 79 aa-0.82□□□□□ -2.54
HMBOX1-216ENST00000561377 DEFB130AP0DP74 79 aa-0.82□□□□□ -2.54
HMBOX1-216ENST00000561377 NCMAPQ5T1S8 102 aa-0.82□□□□□ -2.54
HMBOX1-216ENST00000561377 CLPSL2Q6UWE3 100 aa-0.82□□□□□ -2.54
HMBOX1-216ENST00000561377 ANKRD26Q9UPS8 1709 aa-0.82□□□□□ -2.54
HMBOX1-216ENST00000561377 VPS8Q8N3P4 1428 aa-0.82□□□□□ -2.54
HMBOX1-216ENST00000561377 TMEM131LA2VDJ0 1609 aa-0.82□□□□□ -2.54
HMBOX1-216ENST00000561377 CCNB3Q8WWL7 1395 aa-0.83□□□□□ -2.54
HMBOX1-216ENST00000561377 UBR1Q8IWV7 1749 aa-0.83□□□□□ -2.54
HMBOX1-216ENST00000561377 NCOA2Q15596 1464 aa-0.83□□□□□ -2.54
HMBOX1-216ENST00000561377 CEBPZOSA8MTT3 80 aa-0.83□□□□□ -2.54
HMBOX1-216ENST00000561377 IFI27P40305 119 aaPredicted RBP-0.83□□□□□ -2.54
HMBOX1-216ENST00000561377 MT1XP80297 61 aa-0.83□□□□□ -2.54
HMBOX1-216ENST00000561377 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.83□□□□□ -2.54
HMBOX1-216ENST00000561377 MAP3K4Q9Y6R4 1608 aa-0.83□□□□□ -2.54
HMBOX1-216ENST00000561377 SPTAN1Q13813 2472 aaKnown RBP-0.83□□□□□ -2.54
HMBOX1-216ENST00000561377 DDX60LQ5H9U9 1706 aaKnown RBP-0.84□□□□□ -2.54
HMBOX1-216ENST00000561377 KIAA0586Q9BVV6 1533 aa-0.84□□□□□ -2.54
HMBOX1-216ENST00000561377 CFAP46Q8IYW2 2715 aa-0.84□□□□□ -2.54
HMBOX1-216ENST00000561377 SRCAPQ6ZRS2 3230 aa-0.84□□□□□ -2.54
HMBOX1-216ENST00000561377 MRPL33O75394 65 aaKnown RBP-0.84□□□□□ -2.54
HMBOX1-216ENST00000561377 ACYP1P07311 99 aa-0.84□□□□□ -2.54
HMBOX1-216ENST00000561377 SNRPFP62306 86 aaKnown RBP-0.84□□□□□ -2.54
HMBOX1-216ENST00000561377 LINC00643Q86TS7 51 aa-0.84□□□□□ -2.54
HMBOX1-216ENST00000561377 COL6A5A8TX70 2615 aa-0.84□□□□□ -2.54
HMBOX1-216ENST00000561377 ABCC3O15438 1527 aa-0.84□□□□□ -2.54
HMBOX1-216ENST00000561377 ARFGEF2Q9Y6D5 1785 aa-0.85□□□□□ -2.55
HMBOX1-216ENST00000561377 DEFB131BA0A096LNP1 70 aa-0.85□□□□□ -2.55
HMBOX1-216ENST00000561377 UMAD1C9J7I0 102 aa-0.85□□□□□ -2.55
HMBOX1-216ENST00000561377 ATP6V1G2-DDX39BF2Z307 99 aa-0.85□□□□□ -2.55
HMBOX1-216ENST00000561377 M0R143 59 aa-0.85□□□□□ -2.55
HMBOX1-216ENST00000561377 TNP1P09430 55 aa-0.85□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 226.9 ms