RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 ORMDL1Q9P0S3 153 aa6.32□□□□□ -1.4
TPM1-229ENST00000561242 DNAH8Q96JB1 4490 aa6.32□□□□□ -1.4
TPM1-229ENST00000561242 TMEM256-PLSCR3K7ERE1 68 aa6.3□□□□□ -1.4
TPM1-229ENST00000561242 ATXN8Q156A1 80 aa6.3□□□□□ -1.4
TPM1-229ENST00000561242 KRTAP13-2Q52LG2 175 aa6.3□□□□□ -1.4
TPM1-229ENST00000561242 Q6JHZ5 121 aa6.3□□□□□ -1.4
TPM1-229ENST00000561242 FLG2Q5D862 2391 aaPredicted RBP6.3□□□□□ -1.4
TPM1-229ENST00000561242 IGLV5-48A0A075B6I7 105 aa6.29□□□□□ -1.4
TPM1-229ENST00000561242 HRCT1Q6UXD1 115 aa6.29□□□□□ -1.4
TPM1-229ENST00000561242 SRRM2Q9UQ35 2752 aaKnown RBP6.29□□□□□ -1.4
TPM1-229ENST00000561242 TCL1BO95988 128 aa6.28□□□□□ -1.4
TPM1-229ENST00000561242 SMCPP49901 116 aaPredicted RBP6.28□□□□□ -1.4
TPM1-229ENST00000561242 Q8N377 158 aa6.28□□□□□ -1.4
TPM1-229ENST00000561242 CLEC2BQ92478 149 aa6.28□□□□□ -1.4
TPM1-229ENST00000561242 TRBV20-1A0A075B6N2 111 aa6.27□□□□□ -1.41
TPM1-229ENST00000561242 PCP4L1A6NKN8 68 aa6.27□□□□□ -1.41
TPM1-229ENST00000561242 TRACP01848 142 aa6.26□□□□□ -1.41
TPM1-229ENST00000561242 NDUFV3P56181 108 aaKnown RBP6.26□□□□□ -1.41
TPM1-229ENST00000561242 VPS13BQ7Z7G8 4022 aa6.25□□□□□ -1.41
TPM1-229ENST00000561242 H3BMG7 143 aa6.25□□□□□ -1.41
TPM1-229ENST00000561242 H3BUT2 72 aa6.24□□□□□ -1.41
TPM1-229ENST00000561242 RPS29P62273 56 aaKnown RBP6.24□□□□□ -1.41
TPM1-229ENST00000561242 CD164Q04900 197 aa6.24□□□□□ -1.41
TPM1-229ENST00000561242 COL5A1-AS1Q5SY13 56 aa6.24□□□□□ -1.41
TPM1-229ENST00000561242 ANKRD29Q8N6D5 301 aa6.23□□□□□ -1.41
TPM1-229ENST00000561242 FAM218AQ96MZ4 157 aa6.23□□□□□ -1.41
TPM1-229ENST00000561242 LST1O00453 97 aa6.22□□□□□ -1.41
TPM1-229ENST00000561242 BAALC-AS2P0C853 105 aa6.22□□□□□ -1.41
TPM1-229ENST00000561242 DSCR8Q96T75 97 aa6.22□□□□□ -1.41
TPM1-229ENST00000561242 C9orf118A6NHY6 69 aa6.21□□□□□ -1.42
TPM1-229ENST00000561242 LINC01547P58512 204 aaPredicted RBP6.21□□□□□ -1.42
TPM1-229ENST00000561242 NAA38Q9BRA0 125 aaKnown RBP6.21□□□□□ -1.42
TPM1-229ENST00000561242 SS18L2Q9UHA2 77 aa6.21□□□□□ -1.42
TPM1-229ENST00000561242 IGLV7-46A0A075B6I9 117 aa6.2□□□□□ -1.42
TPM1-229ENST00000561242 UBE2V1Q13404 147 aa6.2□□□□□ -1.42
TPM1-229ENST00000561242 FP248Q71RG6 208 aaPredicted RBP6.2□□□□□ -1.42
TPM1-229ENST00000561242 SMIM29Q86T20 159 aa6.2□□□□□ -1.42
TPM1-229ENST00000561242 FAT1Q14517 4588 aa6.2□□□□□ -1.42
TPM1-229ENST00000561242 RBM3P98179 157 aaKnown RBP6.19□□□□□ -1.42
TPM1-229ENST00000561242 ABCA13Q86UQ4 5058 aa6.19□□□□□ -1.42
TPM1-229ENST00000561242 A0A1B0GV72 72 aa6.18□□□□□ -1.42
TPM1-229ENST00000561242 JMJD7-PLA2G4BH0Y9G9 81 aa6.18□□□□□ -1.42
TPM1-229ENST00000561242 C21orf62-AS1Q17RA5 79 aa6.18□□□□□ -1.42
TPM1-229ENST00000561242 TEN1Q86WV5 123 aa6.18□□□□□ -1.42
TPM1-229ENST00000561242 RETNLBQ9BQ08 111 aa6.18□□□□□ -1.42
TPM1-229ENST00000561242 VPS25Q9BRG1 176 aa6.18□□□□□ -1.42
TPM1-229ENST00000561242 CDIP1Q9H305 208 aa6.18□□□□□ -1.42
TPM1-229ENST00000561242 DMBT1Q9UGM3 2413 aaPredicted RBP6.17□□□□□ -1.42
TPM1-229ENST00000561242 A0A1W2PPM0 123 aa6.17□□□□□ -1.42
TPM1-229ENST00000561242 IGLV8-61A0A075B6I0 122 aa6.16□□□□□ -1.42
TPM1-229ENST00000561242 C9JAW5 83 aa6.16□□□□□ -1.42
TPM1-229ENST00000561242 IGFL1Q6UW32 110 aa6.16□□□□□ -1.42
TPM1-229ENST00000561242 GTF2H5Q6ZYL4 71 aa6.15□□□□□ -1.42
TPM1-229ENST00000561242 SPCS1Q9Y6A9 102 aa6.15□□□□□ -1.42
TPM1-229ENST00000561242 TRBV7-7A0A0K0K1E9 115 aa6.14□□□□□ -1.43
TPM1-229ENST00000561242 TAX1BP3O14907 124 aa6.14□□□□□ -1.43
TPM1-229ENST00000561242 PDE6GP18545 87 aa6.14□□□□□ -1.43
TPM1-229ENST00000561242 CCKP06307 115 aa6.13□□□□□ -1.43
TPM1-229ENST00000561242 A0A0G2JQZ4 141 aa6.11□□□□□ -1.43
TPM1-229ENST00000561242 A0A087WSZ3 146 aa6.1□□□□□ -1.43
TPM1-229ENST00000561242 H3BT86 120 aa6.1□□□□□ -1.43
TPM1-229ENST00000561242 Q5XG85 94 aa6.1□□□□□ -1.43
TPM1-229ENST00000561242 TRBV7-4A0A0J9YYF1 115 aa6.09□□□□□ -1.43
TPM1-229ENST00000561242 Q6Q795 121 aa6.09□□□□□ -1.43
TPM1-229ENST00000561242 TPRXLQ17RH7 258 aa6.07□□□□□ -1.44
TPM1-229ENST00000561242 PKHD1L1Q86WI1 4243 aa6.05□□□□□ -1.44
TPM1-229ENST00000561242 A0A1B0GW54 56 aa6.05□□□□□ -1.44
TPM1-229ENST00000561242 K7EP34 96 aa6.05□□□□□ -1.44
TPM1-229ENST00000561242 ASB16-AS1Q495Z4 193 aa6.05□□□□□ -1.44
TPM1-229ENST00000561242 SIGMAR1Q99720 223 aa6.05□□□□□ -1.44
TPM1-229ENST00000561242 NDUFB1O75438 58 aa6.04□□□□□ -1.44
TPM1-229ENST00000561242 C1orf195Q5TG92 126 aa6.04□□□□□ -1.44
TPM1-229ENST00000561242 NREPQ16612 68 aa6.03□□□□□ -1.44
TPM1-229ENST00000561242 C14orf132Q9NPU4 83 aa6.03□□□□□ -1.44
TPM1-229ENST00000561242 MYCBP2O75592 4640 aa6.02□□□□□ -1.45
TPM1-229ENST00000561242 LOC110117498A0A087WWA1 95 aa6.02□□□□□ -1.45
TPM1-229ENST00000561242 A0A1W2PNM2 257 aa6.02□□□□□ -1.45
TPM1-229ENST00000561242 C9orf92A6NGG3 77 aa6.02□□□□□ -1.45
TPM1-229ENST00000561242 F8W1H4 67 aa6.02□□□□□ -1.45
TPM1-229ENST00000561242 J3KT08 172 aa6.02□□□□□ -1.45
TPM1-229ENST00000561242 IGKV4-1P06312 121 aa6.02□□□□□ -1.45
TPM1-229ENST00000561242 SEC61BP60468 96 aaKnown RBP6.02□□□□□ -1.45
TPM1-229ENST00000561242 MTURNQ8N3F0 131 aa6.02□□□□□ -1.45
TPM1-229ENST00000561242 HERC1Q15751 4861 aa6.01□□□□□ -1.45
TPM1-229ENST00000561242 LCE2AQ5TA79 106 aaPredicted RBP6□□□□□ -1.45
TPM1-229ENST00000561242 Q6ZQT0 140 aa5.99□□□□□ -1.45
TPM1-229ENST00000561242 LCE2CQ5TA81 110 aa5.98□□□□□ -1.45
TPM1-229ENST00000561242 LRP1Q07954 4544 aaKnown RBP5.98□□□□□ -1.45
TPM1-229ENST00000561242 A0A0U1RQV1 116 aa5.97□□□□□ -1.45
TPM1-229ENST00000561242 KRTAP13-3Q3SY46 172 aa5.97□□□□□ -1.45
TPM1-229ENST00000561242 FAT3Q8TDW7 4589 aa5.96□□□□□ -1.45
TPM1-229ENST00000561242 LINC00313P59037 77 aa5.95□□□□□ -1.46
TPM1-229ENST00000561242 DEFB116Q30KQ4 102 aa5.95□□□□□ -1.46
TPM1-229ENST00000561242 OBSCN-AS1Q96MR7 158 aa5.95□□□□□ -1.46
TPM1-229ENST00000561242 Q96NJ1 140 aa5.95□□□□□ -1.46
TPM1-229ENST00000561242 UBL5Q9BZL1 73 aa5.95□□□□□ -1.46
TPM1-229ENST00000561242 IGHV6-1A0A0B4J1U7 121 aa5.94□□□□□ -1.46
TPM1-229ENST00000561242 ATP11AUNQ6ZP68 121 aa5.94□□□□□ -1.46
TPM1-229ENST00000561242 C8orf87E5RJ46 101 aa5.92□□□□□ -1.46
TPM1-229ENST00000561242 BPY2O14599 106 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms