RNA–Protein interactions for RNA: ENST00000561189.1

CTDSPL2-211, Transcript of CTD small phosphatase like 2, humanhuman

TSL 5

Gene CTDSPL2, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-211ENST00000561189 MAP1BP46821 2468 aaKnown RBP0.28□□□□□ -2.36
CTDSPL2-211ENST00000561189 HFM1A2PYH4 1435 aa0.28□□□□□ -2.37
CTDSPL2-211ENST00000561189 LPAP08519 4548 aa0.27□□□□□ -2.37
CTDSPL2-211ENST00000561189 HRNRQ86YZ3 2850 aaPredicted RBP0.27□□□□□ -2.37
CTDSPL2-211ENST00000561189 LINC01549A6NIU2 74 aa0.27□□□□□ -2.37
CTDSPL2-211ENST00000561189 CRIP1P50238 77 aa0.27□□□□□ -2.37
CTDSPL2-211ENST00000561189 PDE4DIPQ5VU43 2346 aa0.27□□□□□ -2.37
CTDSPL2-211ENST00000561189 PLXNC1O60486 1568 aa0.27□□□□□ -2.37
CTDSPL2-211ENST00000561189 EP300Q09472 2414 aaPredicted RBP0.26□□□□□ -2.37
CTDSPL2-211ENST00000561189 COX6B2Q6YFQ2 88 aa0.26□□□□□ -2.37
CTDSPL2-211ENST00000561189 KCNQ1DNQ9H478 68 aa0.26□□□□□ -2.37
CTDSPL2-211ENST00000561189 SETXQ7Z333 2677 aaKnown RBP0.26□□□□□ -2.37
CTDSPL2-211ENST00000561189 DSPP15924 2871 aaKnown RBP0.25□□□□□ -2.37
CTDSPL2-211ENST00000561189 C3P01024 1663 aa0.25□□□□□ -2.37
CTDSPL2-211ENST00000561189 A0A087WWC5 75 aa0.25□□□□□ -2.37
CTDSPL2-211ENST00000561189 S100ZQ8WXG8 99 aa0.25□□□□□ -2.37
CTDSPL2-211ENST00000561189 UBL5Q9BZL1 73 aa0.25□□□□□ -2.37
CTDSPL2-211ENST00000561189 NSD1Q96L73 2696 aaPredicted RBP0.25□□□□□ -2.37
CTDSPL2-211ENST00000561189 HECTD1Q9ULT8 2610 aa0.25□□□□□ -2.37
CTDSPL2-211ENST00000561189 UBR4Q5T4S7 5183 aa0.24□□□□□ -2.37
CTDSPL2-211ENST00000561189 DEFB131BA0A096LNP1 70 aa0.24□□□□□ -2.37
CTDSPL2-211ENST00000561189 ETDCA0A1B0GVM5 59 aa0.24□□□□□ -2.37
CTDSPL2-211ENST00000561189 K7EMI3 77 aa0.24□□□□□ -2.37
CTDSPL2-211ENST00000561189 SSPOA2VEC9 5147 aa0.24□□□□□ -2.37
CTDSPL2-211ENST00000561189 WNK1Q9H4A3 2382 aa0.24□□□□□ -2.37
CTDSPL2-211ENST00000561189 SFTA3P0C7M3 94 aa0.23□□□□□ -2.37
CTDSPL2-211ENST00000561189 DEPDC5O75140 1603 aa0.23□□□□□ -2.37
CTDSPL2-211ENST00000561189 ABCC6O95255 1503 aa0.23□□□□□ -2.37
CTDSPL2-211ENST00000561189 HSPG2P98160 4391 aa0.22□□□□□ -2.37
CTDSPL2-211ENST00000561189 M0R2T5 61 aa0.22□□□□□ -2.37
CTDSPL2-211ENST00000561189 DEFB135Q30KP9 77 aa0.22□□□□□ -2.37
CTDSPL2-211ENST00000561189 TIAM1Q13009 1591 aa0.22□□□□□ -2.37
CTDSPL2-211ENST00000561189 FLNCQ14315 2725 aa0.21□□□□□ -2.38
CTDSPL2-211ENST00000561189 DMBT1Q9UGM3 2413 aaPredicted RBP0.21□□□□□ -2.38
CTDSPL2-211ENST00000561189 DEFB130BP0DP73 79 aa0.21□□□□□ -2.38
CTDSPL2-211ENST00000561189 DEFB130AP0DP74 79 aa0.21□□□□□ -2.38
CTDSPL2-211ENST00000561189 IAPPP10997 89 aa0.21□□□□□ -2.38
CTDSPL2-211ENST00000561189 PKD1P98161 4303 aa0.21□□□□□ -2.38
CTDSPL2-211ENST00000561189 NBASA2RRP1 2371 aa0.2□□□□□ -2.38
CTDSPL2-211ENST00000561189 PRRC2CQ9Y520 2896 aaKnown RBP0.2□□□□□ -2.38
CTDSPL2-211ENST00000561189 TNRC18O15417 2968 aaPredicted RBP0.2□□□□□ -2.38
CTDSPL2-211ENST00000561189 HMCN2Q8NDA2 5059 aa0.2□□□□□ -2.38
CTDSPL2-211ENST00000561189 LRP1BQ9NZR2 4599 aa0.2□□□□□ -2.38
CTDSPL2-211ENST00000561189 CREBBPQ92793 2442 aa0.2□□□□□ -2.38
CTDSPL2-211ENST00000561189 BPTFQ12830 3046 aa0.2□□□□□ -2.38
CTDSPL2-211ENST00000561189 MROH2AA6NES4 1674 aa0.2□□□□□ -2.38
CTDSPL2-211ENST00000561189 ALS2Q96Q42 1657 aa0.2□□□□□ -2.38
CTDSPL2-211ENST00000561189 ACANP16112 2415 aa0.19□□□□□ -2.38
CTDSPL2-211ENST00000561189 UGGT1Q9NYU2 1555 aa0.19□□□□□ -2.38
CTDSPL2-211ENST00000561189 RYR1P21817 5038 aa0.19□□□□□ -2.38
CTDSPL2-211ENST00000561189 LY75O60449 1722 aa0.19□□□□□ -2.38
CTDSPL2-211ENST00000561189 LYNX1G3V0Z9 82 aa0.19□□□□□ -2.38
CTDSPL2-211ENST00000561189 MRPL33O75394 65 aaKnown RBP0.19□□□□□ -2.38
CTDSPL2-211ENST00000561189 NCBP2-AS2Q69YL0 99 aa0.19□□□□□ -2.38
CTDSPL2-211ENST00000561189 DCHS2Q6V1P9 2916 aa0.19□□□□□ -2.38
CTDSPL2-211ENST00000561189 APC2O95996 2303 aa0.19□□□□□ -2.38
CTDSPL2-211ENST00000561189 HECTD4Q9Y4D8 3996 aa0.19□□□□□ -2.38
CTDSPL2-211ENST00000561189 KIAA0586Q9BVV6 1533 aa0.18□□□□□ -2.38
CTDSPL2-211ENST00000561189 ITSN2Q9NZM3 1697 aa0.18□□□□□ -2.38
CTDSPL2-211ENST00000561189 PRXQ9BXM0 1461 aa0.18□□□□□ -2.38
CTDSPL2-211ENST00000561189 KMT2CQ8NEZ4 4911 aaKnown RBP0.18□□□□□ -2.38
CTDSPL2-211ENST00000561189 M0R1W7 72 aa0.18□□□□□ -2.38
CTDSPL2-211ENST00000561189 SPRR2DP22532 72 aa0.18□□□□□ -2.38
CTDSPL2-211ENST00000561189 FCER1GP30273 86 aa0.18□□□□□ -2.38
CTDSPL2-211ENST00000561189 SPRR2GQ9BYE4 73 aa0.18□□□□□ -2.38
CTDSPL2-211ENST00000561189 COL6A3P12111 3177 aa0.17□□□□□ -2.38
CTDSPL2-211ENST00000561189 ANKRD36CQ5JPF3 1778 aa0.17□□□□□ -2.38
CTDSPL2-211ENST00000561189 THOC2Q8NI27 1593 aaKnown RBP0.17□□□□□ -2.38
CTDSPL2-211ENST00000561189 TOGARAM1Q9Y4F4 1720 aa0.17□□□□□ -2.38
CTDSPL2-211ENST00000561189 CPS1P31327 1500 aa0.17□□□□□ -2.38
CTDSPL2-211ENST00000561189 COL7A1Q02388 2944 aa0.17□□□□□ -2.38
CTDSPL2-211ENST00000561189 PKHD1P08F94 4074 aa0.16□□□□□ -2.38
CTDSPL2-211ENST00000561189 DNAH9Q9NYC9 4486 aa0.16□□□□□ -2.38
CTDSPL2-211ENST00000561189 DEFB114Q30KQ6 69 aa0.16□□□□□ -2.38
CTDSPL2-211ENST00000561189 CROCC2H7BZ55 1655 aa0.16□□□□□ -2.38
CTDSPL2-211ENST00000561189 CEP290O15078 2479 aa0.16□□□□□ -2.38
CTDSPL2-211ENST00000561189 ABCA10Q8WWZ4 1543 aa0.16□□□□□ -2.38
CTDSPL2-211ENST00000561189 LYSTQ99698 3801 aa0.16□□□□□ -2.38
CTDSPL2-211ENST00000561189 FLNBO75369 2602 aaKnown RBP0.16□□□□□ -2.38
CTDSPL2-211ENST00000561189 PCNX1Q96RV3 2341 aa0.15□□□□□ -2.38
CTDSPL2-211ENST00000561189 MINOS1Q5TGZ0 78 aa0.15□□□□□ -2.39
CTDSPL2-211ENST00000561189 KIF1AQ12756 1690 aa0.14□□□□□ -2.39
CTDSPL2-211ENST00000561189 LRP2P98164 4655 aa0.14□□□□□ -2.39
CTDSPL2-211ENST00000561189 FLNAP21333 2647 aaKnown RBP0.14□□□□□ -2.39
CTDSPL2-211ENST00000561189 RPS27P42677 84 aaKnown RBP0.14□□□□□ -2.39
CTDSPL2-211ENST00000561189 SMIM5Q71RC9 77 aa0.14□□□□□ -2.39
CTDSPL2-211ENST00000561189 RPS27LQ71UM5 84 aaKnown RBP0.14□□□□□ -2.39
CTDSPL2-211ENST00000561189 DEFB106AQ8N104 65 aa0.14□□□□□ -2.39
CTDSPL2-211ENST00000561189 TENM2Q9NT68 2774 aa0.14□□□□□ -2.39
CTDSPL2-211ENST00000561189 EEA1Q15075 1411 aa0.13□□□□□ -2.39
CTDSPL2-211ENST00000561189 PREX2Q70Z35 1606 aa0.13□□□□□ -2.39
CTDSPL2-211ENST00000561189 MAP1AP78559 2803 aaPredicted RBP0.13□□□□□ -2.39
CTDSPL2-211ENST00000561189 CDC42BPAQ5VT25 1732 aa0.13□□□□□ -2.39
CTDSPL2-211ENST00000561189 H0YGG7 62 aa0.12□□□□□ -2.39
CTDSPL2-211ENST00000561189 S4R3F8 94 aa0.12□□□□□ -2.39
CTDSPL2-211ENST00000561189 SPTBN4Q9H254 2564 aa0.11□□□□□ -2.39
CTDSPL2-211ENST00000561189 NF1P21359 2839 aa0.11□□□□□ -2.39
CTDSPL2-211ENST00000561189 C6orf48Q9UBA6 75 aa0.11□□□□□ -2.39
CTDSPL2-211ENST00000561189 GCN1Q92616 2671 aaKnown RBP0.11□□□□□ -2.39
CTDSPL2-211ENST00000561189 PDZD2O15018 2839 aa0.11□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms