RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 UQCR10Q9UDW1 63 aa8.57□□□□□ -1.04
SNRPA1-213ENST00000560856 PRO1854Q9UHT4 67 aa8.57□□□□□ -1.04
SNRPA1-213ENST00000560856 CD164Q04900 197 aa8.56□□□□□ -1.04
SNRPA1-213ENST00000560856 HRCT1Q6UXD1 115 aa8.56□□□□□ -1.04
SNRPA1-213ENST00000560856 KRTAP13-3Q3SY46 172 aa8.55□□□□□ -1.04
SNRPA1-213ENST00000560856 FAM218AQ96MZ4 157 aa8.55□□□□□ -1.04
SNRPA1-213ENST00000560856 MUC17Q685J3 4493 aa8.54□□□□□ -1.04
SNRPA1-213ENST00000560856 H0YGX0 51 aa8.54□□□□□ -1.04
SNRPA1-213ENST00000560856 IGLV8-61A0A075B6I0 122 aa8.53□□□□□ -1.04
SNRPA1-213ENST00000560856 CDIP1Q9H305 208 aa8.52□□□□□ -1.05
SNRPA1-213ENST00000560856 Q5XG85 94 aa8.51□□□□□ -1.05
SNRPA1-213ENST00000560856 PPDPFLQ8WWR9 84 aa8.51□□□□□ -1.05
SNRPA1-213ENST00000560856 K7ERJ3 54 aa8.5□□□□□ -1.05
SNRPA1-213ENST00000560856 TRIAP1O43715 76 aa8.5□□□□□ -1.05
SNRPA1-213ENST00000560856 LIMD2Q9BT23 127 aa8.5□□□□□ -1.05
SNRPA1-213ENST00000560856 OCIAD2Q56VL3 154 aa8.49□□□□□ -1.05
SNRPA1-213ENST00000560856 F8WEM9 126 aa8.48□□□□□ -1.05
SNRPA1-213ENST00000560856 A0A1B0GX51 115 aa8.47□□□□□ -1.05
SNRPA1-213ENST00000560856 MUC2Q02817 5179 aa8.46□□□□□ -1.05
SNRPA1-213ENST00000560856 Q6JHZ5 121 aa8.46□□□□□ -1.06
SNRPA1-213ENST00000560856 IGFL1Q6UW32 110 aa8.46□□□□□ -1.06
SNRPA1-213ENST00000560856 SMIM6P0DI80 62 aa8.45□□□□□ -1.06
SNRPA1-213ENST00000560856 SNHG12Q9BXW3 62 aa8.45□□□□□ -1.06
SNRPA1-213ENST00000560856 SNCGO76070 127 aa8.44□□□□□ -1.06
SNRPA1-213ENST00000560856 C1orf195Q5TG92 126 aa8.44□□□□□ -1.06
SNRPA1-213ENST00000560856 CLEC2BQ92478 149 aa8.44□□□□□ -1.06
SNRPA1-213ENST00000560856 LCE2DQ5TA82 110 aaPredicted RBP8.43□□□□□ -1.06
SNRPA1-213ENST00000560856 LOC105371267A0A1B0GV96 52 aa8.42□□□□□ -1.06
SNRPA1-213ENST00000560856 H3BUT2 72 aa8.42□□□□□ -1.06
SNRPA1-213ENST00000560856 NDUFV3P56181 108 aaKnown RBP8.41□□□□□ -1.06
SNRPA1-213ENST00000560856 TRBV7-7A0A0K0K1E9 115 aa8.4□□□□□ -1.06
SNRPA1-213ENST00000560856 PSMB2P49721 201 aa8.4□□□□□ -1.06
SNRPA1-213ENST00000560856 ASB16-AS1Q495Z4 193 aa8.38□□□□□ -1.07
SNRPA1-213ENST00000560856 XP32Q5T750 250 aa8.38□□□□□ -1.07
SNRPA1-213ENST00000560856 TCL1BO95988 128 aa8.37□□□□□ -1.07
SNRPA1-213ENST00000560856 COX6CP09669 75 aa8.37□□□□□ -1.07
SNRPA1-213ENST00000560856 GHRHP01286 108 aa8.35□□□□□ -1.07
SNRPA1-213ENST00000560856 FABP2P12104 132 aa8.35□□□□□ -1.07
SNRPA1-213ENST00000560856 Q6Q795 121 aa8.35□□□□□ -1.07
SNRPA1-213ENST00000560856 H3BMG7 143 aa8.34□□□□□ -1.07
SNRPA1-213ENST00000560856 C9orf92A6NGG3 77 aa8.33□□□□□ -1.08
SNRPA1-213ENST00000560856 M0R143 59 aa8.33□□□□□ -1.08
SNRPA1-213ENST00000560856 ORMDL1Q9P0S3 153 aa8.33□□□□□ -1.08
SNRPA1-213ENST00000560856 LST1O00453 97 aa8.32□□□□□ -1.08
SNRPA1-213ENST00000560856 DNAL4O96015 105 aa8.32□□□□□ -1.08
SNRPA1-213ENST00000560856 TRACP01848 142 aa8.32□□□□□ -1.08
SNRPA1-213ENST00000560856 KRTAP4-1Q9BYQ7 146 aa8.32□□□□□ -1.08
SNRPA1-213ENST00000560856 H3BQ85 93 aa8.31□□□□□ -1.08
SNRPA1-213ENST00000560856 TEN1Q86WV5 123 aa8.31□□□□□ -1.08
SNRPA1-213ENST00000560856 A0A1W2PNM2 257 aa8.3□□□□□ -1.08
SNRPA1-213ENST00000560856 SCGB1C2P0DMR2 95 aa8.3□□□□□ -1.08
SNRPA1-213ENST00000560856 SEC61BP60468 96 aaKnown RBP8.3□□□□□ -1.08
SNRPA1-213ENST00000560856 FAT4Q6V0I7 4981 aa8.29□□□□□ -1.08
SNRPA1-213ENST00000560856 TMEM256-PLSCR3K7ERE1 68 aa8.29□□□□□ -1.08
SNRPA1-213ENST00000560856 TSTD3H0UI37 97 aa8.28□□□□□ -1.08
SNRPA1-213ENST00000560856 UBE2V1Q13404 147 aa8.27□□□□□ -1.09
SNRPA1-213ENST00000560856 NAA38Q9BRA0 125 aaKnown RBP8.27□□□□□ -1.09
SNRPA1-213ENST00000560856 A0A087WSZ3 146 aa8.25□□□□□ -1.09
SNRPA1-213ENST00000560856 ANKRD29Q8N6D5 301 aa8.24□□□□□ -1.09
SNRPA1-213ENST00000560856 SS18L2Q9UHA2 77 aa8.24□□□□□ -1.09
SNRPA1-213ENST00000560856 A0A1B0GV72 72 aa8.23□□□□□ -1.09
SNRPA1-213ENST00000560856 Q96NJ1 140 aa8.23□□□□□ -1.09
SNRPA1-213ENST00000560856 A0A0U1RQV1 116 aa8.22□□□□□ -1.09
SNRPA1-213ENST00000560856 BAALC-AS2P0C853 105 aa8.22□□□□□ -1.09
SNRPA1-213ENST00000560856 TRBV7-4A0A0J9YYF1 115 aa8.21□□□□□ -1.1
SNRPA1-213ENST00000560856 PCOTHQ58A44 107 aa8.21□□□□□ -1.1
SNRPA1-213ENST00000560856 RPL37P61927 97 aaKnown RBP8.19□□□□□ -1.1
SNRPA1-213ENST00000560856 ATXN8Q156A1 80 aa8.19□□□□□ -1.1
SNRPA1-213ENST00000560856 BATFQ16520 125 aa8.19□□□□□ -1.1
SNRPA1-213ENST00000560856 LCE2AQ5TA79 106 aaPredicted RBP8.18□□□□□ -1.1
SNRPA1-213ENST00000560856 CCKP06307 115 aa8.17□□□□□ -1.1
SNRPA1-213ENST00000560856 RBM3P98179 157 aaKnown RBP8.16□□□□□ -1.1
SNRPA1-213ENST00000560856 TAX1BP3O14907 124 aa8.15□□□□□ -1.1
SNRPA1-213ENST00000560856 OBSCN-AS1Q96MR7 158 aa8.15□□□□□ -1.1
SNRPA1-213ENST00000560856 C9orf118A6NHY6 69 aa8.13□□□□□ -1.11
SNRPA1-213ENST00000560856 LINC00472Q9H8W2 130 aa8.13□□□□□ -1.11
SNRPA1-213ENST00000560856 TRBV20-1A0A075B6N2 111 aa8.12□□□□□ -1.11
SNRPA1-213ENST00000560856 LYRM7Q5U5X0 104 aa8.12□□□□□ -1.11
SNRPA1-213ENST00000560856 DSCR8Q96T75 97 aa8.12□□□□□ -1.11
SNRPA1-213ENST00000560856 KRTAP19-2Q3LHN2 52 aa8.1□□□□□ -1.11
SNRPA1-213ENST00000560856 Q75L30 129 aa8.1□□□□□ -1.11
SNRPA1-213ENST00000560856 C9JAW5 83 aa8.09□□□□□ -1.11
SNRPA1-213ENST00000560856 A0A1W2PPM0 123 aa8.08□□□□□ -1.12
SNRPA1-213ENST00000560856 IGKV4-1P06312 121 aa8.08□□□□□ -1.12
SNRPA1-213ENST00000560856 LCE2CQ5TA81 110 aa8.08□□□□□ -1.12
SNRPA1-213ENST00000560856 VPS25Q9BRG1 176 aa8.08□□□□□ -1.12
SNRPA1-213ENST00000560856 JMJD7-PLA2G4BH0Y9G9 81 aa8.07□□□□□ -1.12
SNRPA1-213ENST00000560856 DEFB116Q30KQ4 102 aa8.07□□□□□ -1.12
SNRPA1-213ENST00000560856 Q6ZQT0 140 aa8.07□□□□□ -1.12
SNRPA1-213ENST00000560856 C20orf166-AS1Q96NR2 134 aa8.07□□□□□ -1.12
SNRPA1-213ENST00000560856 SIGMAR1Q99720 223 aa8.07□□□□□ -1.12
SNRPA1-213ENST00000560856 LOC110117498A0A087WWA1 95 aa8.06□□□□□ -1.12
SNRPA1-213ENST00000560856 A8MUU9 505 aa8.05□□□□□ -1.12
SNRPA1-213ENST00000560856 DSCR10P59022 87 aa8.05□□□□□ -1.12
SNRPA1-213ENST00000560856 NOTCH2NLQ7Z3S9 236 aa8.04□□□□□ -1.12
SNRPA1-213ENST00000560856 KRTAP16-1A8MUX0 517 aa8.02□□□□□ -1.13
SNRPA1-213ENST00000560856 C14orf132Q9NPU4 83 aa8.02□□□□□ -1.13
SNRPA1-213ENST00000560856 H3BT86 120 aa8.01□□□□□ -1.13
SNRPA1-213ENST00000560856 PDE6GP18545 87 aa8.01□□□□□ -1.13
SNRPA1-213ENST00000560856 C21orf62-AS1Q17RA5 79 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms