RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 Q6JHZ5 121 aa7.73□□□□□ -1.17
TPM1-223ENST00000560445 hADV29S1A0JD25 119 aa7.72□□□□□ -1.17
TPM1-223ENST00000560445 COX8AP10176 69 aa7.72□□□□□ -1.17
TPM1-223ENST00000560445 BVES-AS1Q5T3Y7 98 aa7.72□□□□□ -1.17
TPM1-223ENST00000560445 LINC00575Q6W349 94 aa7.72□□□□□ -1.17
TPM1-223ENST00000560445 KRTAP9-2Q9BYQ4 174 aa7.72□□□□□ -1.17
TPM1-223ENST00000560445 DLEU1O43261 78 aa7.71□□□□□ -1.18
TPM1-223ENST00000560445 PPDPFLQ8WWR9 84 aa7.71□□□□□ -1.18
TPM1-223ENST00000560445 C9orf92A6NGG3 77 aa7.7□□□□□ -1.18
TPM1-223ENST00000560445 C1orf195Q5TG92 126 aa7.69□□□□□ -1.18
TPM1-223ENST00000560445 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.69□□□□□ -1.18
TPM1-223ENST00000560445 Q6ZQY7 126 aa7.68□□□□□ -1.18
TPM1-223ENST00000560445 C12orf57Q99622 126 aa7.68□□□□□ -1.18
TPM1-223ENST00000560445 PCOTHQ58A44 107 aa7.67□□□□□ -1.18
TPM1-223ENST00000560445 CLEC2BQ92478 149 aa7.67□□□□□ -1.18
TPM1-223ENST00000560445 RAB37Q96AX2 223 aa7.67□□□□□ -1.18
TPM1-223ENST00000560445 C14orf144Q96I85 54 aa7.67□□□□□ -1.18
TPM1-223ENST00000560445 IGLV8-61A0A075B6I0 122 aa7.66□□□□□ -1.18
TPM1-223ENST00000560445 GHRHP01286 108 aa7.66□□□□□ -1.18
TPM1-223ENST00000560445 SPATA45Q537H7 98 aa7.66□□□□□ -1.18
TPM1-223ENST00000560445 VAMP8Q9BV40 100 aa7.66□□□□□ -1.18
TPM1-223ENST00000560445 PAM16Q9Y3D7 125 aa7.66□□□□□ -1.18
TPM1-223ENST00000560445 KRTAP4-1Q9BYQ7 146 aa7.65□□□□□ -1.18
TPM1-223ENST00000560445 HIGD1BQ9P298 99 aa7.65□□□□□ -1.18
TPM1-223ENST00000560445 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.64□□□□□ -1.19
TPM1-223ENST00000560445 OCIAD2Q56VL3 154 aa7.64□□□□□ -1.19
TPM1-223ENST00000560445 SNHG12Q9BXW3 62 aa7.64□□□□□ -1.19
TPM1-223ENST00000560445 A0A0G2JQZ4 141 aa7.62□□□□□ -1.19
TPM1-223ENST00000560445 H0YGX0 51 aa7.62□□□□□ -1.19
TPM1-223ENST00000560445 CFC1BP0CG36 223 aa7.62□□□□□ -1.19
TPM1-223ENST00000560445 CFC1P0CG37 223 aa7.62□□□□□ -1.19
TPM1-223ENST00000560445 TRBV7-7A0A0K0K1E9 115 aa7.61□□□□□ -1.19
TPM1-223ENST00000560445 TMEM238LA0A1B0GVL6 79 aa7.61□□□□□ -1.19
TPM1-223ENST00000560445 A6NJY4 79 aa7.61□□□□□ -1.19
TPM1-223ENST00000560445 RPL37P61927 97 aaKnown RBP7.61□□□□□ -1.19
TPM1-223ENST00000560445 A0A0B4J2C4 111 aa7.6□□□□□ -1.19
TPM1-223ENST00000560445 KRTAP9-6A0A140TA67 174 aa7.6□□□□□ -1.19
TPM1-223ENST00000560445 SS18L2Q9UHA2 77 aa7.6□□□□□ -1.19
TPM1-223ENST00000560445 IGFL1Q6UW32 110 aa7.59□□□□□ -1.19
TPM1-223ENST00000560445 CEND1Q8N111 149 aa7.58□□□□□ -1.2
TPM1-223ENST00000560445 LST1O00453 97 aa7.56□□□□□ -1.2
TPM1-223ENST00000560445 C2orf91Q6ZV80 131 aa7.56□□□□□ -1.2
TPM1-223ENST00000560445 PRO1854Q9UHT4 67 aa7.56□□□□□ -1.2
TPM1-223ENST00000560445 A0A1B0GX51 115 aa7.54□□□□□ -1.2
TPM1-223ENST00000560445 Q6Q795 121 aa7.53□□□□□ -1.2
TPM1-223ENST00000560445 COX6B2Q6YFQ2 88 aa7.53□□□□□ -1.2
TPM1-223ENST00000560445 ATP11AUNQ6ZP68 121 aa7.52□□□□□ -1.21
TPM1-223ENST00000560445 H3BQ85 93 aa7.51□□□□□ -1.21
TPM1-223ENST00000560445 H3BUT2 72 aa7.51□□□□□ -1.21
TPM1-223ENST00000560445 NDUFV3P56181 108 aaKnown RBP7.51□□□□□ -1.21
TPM1-223ENST00000560445 TEN1Q86WV5 123 aa7.51□□□□□ -1.21
TPM1-223ENST00000560445 Q75L30 129 aa7.5□□□□□ -1.21
TPM1-223ENST00000560445 FABP2P12104 132 aa7.49□□□□□ -1.21
TPM1-223ENST00000560445 OBSCN-AS1Q96MR7 158 aa7.49□□□□□ -1.21
TPM1-223ENST00000560445 FAM218AQ96MZ4 157 aa7.49□□□□□ -1.21
TPM1-223ENST00000560445 H3BMG7 143 aa7.48□□□□□ -1.21
TPM1-223ENST00000560445 COX6CP09669 75 aa7.48□□□□□ -1.21
TPM1-223ENST00000560445 PSMB2P49721 201 aa7.48□□□□□ -1.21
TPM1-223ENST00000560445 FXYD2P54710 66 aa7.48□□□□□ -1.21
TPM1-223ENST00000560445 HSD52Q0P140 79 aa7.48□□□□□ -1.21
TPM1-223ENST00000560445 DNAL4O96015 105 aa7.47□□□□□ -1.21
TPM1-223ENST00000560445 MT1HP80294 61 aa7.47□□□□□ -1.21
TPM1-223ENST00000560445 KRTAP19-2Q3LHN2 52 aa7.47□□□□□ -1.21
TPM1-223ENST00000560445 PYY3Q5JQD4 70 aa7.47□□□□□ -1.21
TPM1-223ENST00000560445 M0R2T5 61 aa7.46□□□□□ -1.22
TPM1-223ENST00000560445 TRIAP1O43715 76 aa7.45□□□□□ -1.22
TPM1-223ENST00000560445 Q96NJ1 140 aa7.44□□□□□ -1.22
TPM1-223ENST00000560445 UQCR10Q9UDW1 63 aa7.44□□□□□ -1.22
TPM1-223ENST00000560445 ORMDL1Q9P0S3 153 aa7.43□□□□□ -1.22
TPM1-223ENST00000560445 TMA7Q9Y2S6 64 aaKnown RBP7.43□□□□□ -1.22
TPM1-223ENST00000560445 A0A087WSZ3 146 aa7.42□□□□□ -1.22
TPM1-223ENST00000560445 TMEM256-PLSCR3K7ERE1 68 aa7.41□□□□□ -1.22
TPM1-223ENST00000560445 KRTAP4-12Q9BQ66 201 aa7.41□□□□□ -1.22
TPM1-223ENST00000560445 ANKRD29Q8N6D5 301 aa7.4□□□□□ -1.22
TPM1-223ENST00000560445 K7ERJ3 54 aa7.39□□□□□ -1.23
TPM1-223ENST00000560445 LCE3BQ5TA77 95 aa7.39□□□□□ -1.23
TPM1-223ENST00000560445 C20orf166-AS1Q96NR2 134 aa7.38□□□□□ -1.23
TPM1-223ENST00000560445 SIGMAR1Q99720 223 aa7.38□□□□□ -1.23
TPM1-223ENST00000560445 TRBV20-1A0A075B6N2 111 aa7.37□□□□□ -1.23
TPM1-223ENST00000560445 TRBV7-4A0A0J9YYF1 115 aa7.37□□□□□ -1.23
TPM1-223ENST00000560445 SCGB1C2P0DMR2 95 aa7.37□□□□□ -1.23
TPM1-223ENST00000560445 A8MUU9 505 aa7.35□□□□□ -1.23
TPM1-223ENST00000560445 KRTAP10-6P60371 365 aaPredicted RBP7.35□□□□□ -1.23
TPM1-223ENST00000560445 A0A1W2PNM2 257 aa7.34□□□□□ -1.23
TPM1-223ENST00000560445 C21orf62-AS1Q17RA5 79 aa7.34□□□□□ -1.23
TPM1-223ENST00000560445 TRACP01848 142 aa7.33□□□□□ -1.24
TPM1-223ENST00000560445 UBE2V1Q13404 147 aa7.33□□□□□ -1.24
TPM1-223ENST00000560445 A0A1B0GV72 72 aa7.32□□□□□ -1.24
TPM1-223ENST00000560445 LINC00313P59037 77 aa7.32□□□□□ -1.24
TPM1-223ENST00000560445 CCKP06307 115 aa7.31□□□□□ -1.24
TPM1-223ENST00000560445 IGKV4-1P06312 121 aa7.31□□□□□ -1.24
TPM1-223ENST00000560445 CRCT1Q9UGL9 99 aa7.31□□□□□ -1.24
TPM1-223ENST00000560445 FSIP2Q5CZC0 6907 aa7.29□□□□□ -1.24
TPM1-223ENST00000560445 DSCR10P59022 87 aa7.29□□□□□ -1.24
TPM1-223ENST00000560445 DSCR8Q96T75 97 aa7.29□□□□□ -1.24
TPM1-223ENST00000560445 M0R143 59 aa7.28□□□□□ -1.24
TPM1-223ENST00000560445 RBM3P98179 157 aaKnown RBP7.28□□□□□ -1.24
TPM1-223ENST00000560445 KRTAP9-9Q9BYP9 154 aa7.27□□□□□ -1.25
TPM1-223ENST00000560445 KRTAP9-4Q9BYQ2 154 aa7.27□□□□□ -1.25
TPM1-223ENST00000560445 VPS25Q9BRG1 176 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms