RNA–Protein interactions for RNA: ENST00000560297.5

USP8-209, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-209ENST00000560297 FAM218AQ96MZ4 157 aa7.25□□□□□ -1.25
USP8-209ENST00000560297 SNHG12Q9BXW3 62 aa7.25□□□□□ -1.25
USP8-209ENST00000560297 LAMTOR3Q9UHA4 124 aa7.25□□□□□ -1.25
USP8-209ENST00000560297 LINC01547P58512 204 aaPredicted RBP7.24□□□□□ -1.25
USP8-209ENST00000560297 PPDPFLQ8WWR9 84 aa7.24□□□□□ -1.25
USP8-209ENST00000560297 CLEC2BQ92478 149 aa7.24□□□□□ -1.25
USP8-209ENST00000560297 PCLOQ9Y6V0 5065 aa7.23□□□□□ -1.25
USP8-209ENST00000560297 KRTAP13-2Q52LG2 175 aa7.23□□□□□ -1.25
USP8-209ENST00000560297 LYRM7Q5U5X0 104 aa7.23□□□□□ -1.25
USP8-209ENST00000560297 Q8N377 158 aa7.23□□□□□ -1.25
USP8-209ENST00000560297 MYCBP2O75592 4640 aa7.23□□□□□ -1.25
USP8-209ENST00000560297 C9orf118A6NHY6 69 aa7.22□□□□□ -1.25
USP8-209ENST00000560297 H3BQ85 93 aa7.22□□□□□ -1.25
USP8-209ENST00000560297 DNAL4O96015 105 aa7.22□□□□□ -1.25
USP8-209ENST00000560297 COL5A1-AS1Q5SY13 56 aa7.22□□□□□ -1.25
USP8-209ENST00000560297 SSBP3-AS1Q7Z2R9 100 aa7.22□□□□□ -1.25
USP8-209ENST00000560297 C3orf22Q8N5N4 141 aa7.22□□□□□ -1.25
USP8-209ENST00000560297 TAX1BP3O14907 124 aa7.21□□□□□ -1.26
USP8-209ENST00000560297 TRACP01848 142 aa7.21□□□□□ -1.26
USP8-209ENST00000560297 IGLV9-49A0A0B4J1Y8 123 aa7.2□□□□□ -1.26
USP8-209ENST00000560297 H3BUT2 72 aa7.2□□□□□ -1.26
USP8-209ENST00000560297 LST1O00453 97 aa7.2□□□□□ -1.26
USP8-209ENST00000560297 SMIM29Q86T20 159 aa7.2□□□□□ -1.26
USP8-209ENST00000560297 NAA38Q9BRA0 125 aaKnown RBP7.2□□□□□ -1.26
USP8-209ENST00000560297 LRP1Q07954 4544 aaKnown RBP7.2□□□□□ -1.26
USP8-209ENST00000560297 TRBV20-1A0A075B6N2 111 aa7.19□□□□□ -1.26
USP8-209ENST00000560297 MOBPQ13875 183 aa7.19□□□□□ -1.26
USP8-209ENST00000560297 ATXN8Q156A1 80 aa7.18□□□□□ -1.26
USP8-209ENST00000560297 C9orf153Q5TBE3 101 aa7.18□□□□□ -1.26
USP8-209ENST00000560297 Q8NBF4 154 aa7.18□□□□□ -1.26
USP8-209ENST00000560297 ORMDL1Q9P0S3 153 aa7.18□□□□□ -1.26
USP8-209ENST00000560297 F8WEM9 126 aa7.17□□□□□ -1.26
USP8-209ENST00000560297 TMEM256-PLSCR3K7ERE1 68 aa7.17□□□□□ -1.26
USP8-209ENST00000560297 SPAG11AQ6PDA7 123 aa7.17□□□□□ -1.26
USP8-209ENST00000560297 FAT3Q8TDW7 4589 aa7.17□□□□□ -1.26
USP8-209ENST00000560297 DMBT1Q9UGM3 2413 aaPredicted RBP7.16□□□□□ -1.26
USP8-209ENST00000560297 A0A1W2PPM0 123 aa7.16□□□□□ -1.26
USP8-209ENST00000560297 TCL1BO95988 128 aa7.16□□□□□ -1.26
USP8-209ENST00000560297 FABP2P12104 132 aa7.16□□□□□ -1.26
USP8-209ENST00000560297 LINC00304Q8N9R0 145 aa7.16□□□□□ -1.26
USP8-209ENST00000560297 NDUFV3P56181 108 aaKnown RBP7.14□□□□□ -1.27
USP8-209ENST00000560297 IGLV8-61A0A075B6I0 122 aa7.13□□□□□ -1.27
USP8-209ENST00000560297 Q6JHZ5 121 aa7.13□□□□□ -1.27
USP8-209ENST00000560297 SPINK1P00995 79 aa7.12□□□□□ -1.27
USP8-209ENST00000560297 BAALC-AS2P0C853 105 aa7.12□□□□□ -1.27
USP8-209ENST00000560297 UBE2V1Q13404 147 aa7.12□□□□□ -1.27
USP8-209ENST00000560297 TNXBP22105 4242 aa7.12□□□□□ -1.27
USP8-209ENST00000560297 CD164Q04900 197 aa7.1□□□□□ -1.27
USP8-209ENST00000560297 LCE3BQ5TA77 95 aa7.1□□□□□ -1.27
USP8-209ENST00000560297 H3BMG7 143 aa7.09□□□□□ -1.27
USP8-209ENST00000560297 RPS29P62273 56 aaKnown RBP7.09□□□□□ -1.27
USP8-209ENST00000560297 SPCS1Q9Y6A9 102 aa7.09□□□□□ -1.27
USP8-209ENST00000560297 C9JAW5 83 aa7.07□□□□□ -1.28
USP8-209ENST00000560297 ANKRD29Q8N6D5 301 aa7.07□□□□□ -1.28
USP8-209ENST00000560297 IGFL1Q6UW32 110 aa7.06□□□□□ -1.28
USP8-209ENST00000560297 RBM3P98179 157 aaKnown RBP7.04□□□□□ -1.28
USP8-209ENST00000560297 HRCT1Q6UXD1 115 aa7.04□□□□□ -1.28
USP8-209ENST00000560297 A0A0G2JQZ4 141 aa7.03□□□□□ -1.28
USP8-209ENST00000560297 JMJD7-PLA2G4BH0Y9G9 81 aa7.03□□□□□ -1.28
USP8-209ENST00000560297 H3BT86 120 aa7.03□□□□□ -1.28
USP8-209ENST00000560297 K7EP34 96 aa7.03□□□□□ -1.28
USP8-209ENST00000560297 GTF2H5Q6ZYL4 71 aa7.03□□□□□ -1.28
USP8-209ENST00000560297 LIMD2Q9BT23 127 aa7.03□□□□□ -1.28
USP8-209ENST00000560297 Q5XG85 94 aa7.02□□□□□ -1.29
USP8-209ENST00000560297 Q6Q795 121 aa7.02□□□□□ -1.29
USP8-209ENST00000560297 TEN1Q86WV5 123 aa7.02□□□□□ -1.29
USP8-209ENST00000560297 DSCR8Q96T75 97 aa7.02□□□□□ -1.29
USP8-209ENST00000560297 KRTAP4-12Q9BQ66 201 aa7.01□□□□□ -1.29
USP8-209ENST00000560297 TRBV7-7A0A0K0K1E9 115 aa7□□□□□ -1.29
USP8-209ENST00000560297 TRBV7-4A0A0J9YYF1 115 aa6.99□□□□□ -1.29
USP8-209ENST00000560297 A0A1B0GV72 72 aa6.99□□□□□ -1.29
USP8-209ENST00000560297 PDE6GP18545 87 aa6.98□□□□□ -1.29
USP8-209ENST00000560297 MTURNQ8N3F0 131 aa6.97□□□□□ -1.29
USP8-209ENST00000560297 OBSCN-AS1Q96MR7 158 aa6.97□□□□□ -1.29
USP8-209ENST00000560297 A0A1W2PNM2 257 aa6.96□□□□□ -1.3
USP8-209ENST00000560297 CCKP06307 115 aa6.96□□□□□ -1.3
USP8-209ENST00000560297 PRR4Q16378 134 aa6.96□□□□□ -1.3
USP8-209ENST00000560297 C21orf62-AS1Q17RA5 79 aa6.96□□□□□ -1.3
USP8-209ENST00000560297 FP248Q71RG6 208 aaPredicted RBP6.96□□□□□ -1.3
USP8-209ENST00000560297 LOC110117498A0A087WWA1 95 aa6.95□□□□□ -1.3
USP8-209ENST00000560297 F8W1H4 67 aa6.95□□□□□ -1.3
USP8-209ENST00000560297 ASB16-AS1Q495Z4 193 aa6.95□□□□□ -1.3
USP8-209ENST00000560297 RETNLBQ9BQ08 111 aa6.95□□□□□ -1.3
USP8-209ENST00000560297 SS18L2Q9UHA2 77 aa6.95□□□□□ -1.3
USP8-209ENST00000560297 PRO0461Q9UI25 63 aa6.95□□□□□ -1.3
USP8-209ENST00000560297 HERC1Q15751 4861 aa6.95□□□□□ -1.3
USP8-209ENST00000560297 A0A1B0GW54 56 aa6.93□□□□□ -1.3
USP8-209ENST00000560297 C14orf132Q9NPU4 83 aa6.93□□□□□ -1.3
USP8-209ENST00000560297 IGLV7-46A0A075B6I9 117 aa6.92□□□□□ -1.3
USP8-209ENST00000560297 A0A087WSZ3 146 aa6.92□□□□□ -1.3
USP8-209ENST00000560297 Q6ZQT0 140 aa6.92□□□□□ -1.3
USP8-209ENST00000560297 VPS25Q9BRG1 176 aa6.92□□□□□ -1.3
USP8-209ENST00000560297 KRTAP9-9Q9BYP9 154 aa6.92□□□□□ -1.3
USP8-209ENST00000560297 KRTAP9-4Q9BYQ2 154 aa6.92□□□□□ -1.3
USP8-209ENST00000560297 C1orf195Q5TG92 126 aa6.91□□□□□ -1.3
USP8-209ENST00000560297 A0A1B0GV90 55 aa6.87□□□□□ -1.31
USP8-209ENST00000560297 TPRXLQ17RH7 258 aa6.86□□□□□ -1.31
USP8-209ENST00000560297 KRTAP19-1Q8IUB9 90 aa6.86□□□□□ -1.31
USP8-209ENST00000560297 KRTAP4-8A0A0G2JLE6 195 aa6.84□□□□□ -1.31
USP8-209ENST00000560297 ETDBQ3ZM63 59 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms