RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 A0A1W2PPM0 123 aa3.16□□□□□ -1.9
SPG11-220ENST00000559933 IGLV7-43P04211 117 aa3.16□□□□□ -1.9
SPG11-220ENST00000559933 Q6ZRX8 168 aa3.16□□□□□ -1.9
SPG11-220ENST00000559933 MTURNQ8N3F0 131 aa3.16□□□□□ -1.9
SPG11-220ENST00000559933 ANAPC11Q9NYG5 84 aa3.16□□□□□ -1.9
SPG11-220ENST00000559933 LRP1Q07954 4544 aaKnown RBP3.15□□□□□ -1.9
SPG11-220ENST00000559933 TCL1BO95988 128 aa3.15□□□□□ -1.91
SPG11-220ENST00000559933 MYCBP2O75592 4640 aa3.14□□□□□ -1.91
SPG11-220ENST00000559933 FAT3Q8TDW7 4589 aa3.14□□□□□ -1.91
SPG11-220ENST00000559933 A0A1B0GV72 72 aa3.14□□□□□ -1.91
SPG11-220ENST00000559933 A0A1B0GV90 55 aa3.14□□□□□ -1.91
SPG11-220ENST00000559933 SCGB1C2P0DMR2 95 aa3.14□□□□□ -1.91
SPG11-220ENST00000559933 LINC00575Q6W349 94 aa3.14□□□□□ -1.91
SPG11-220ENST00000559933 C3orf22Q8N5N4 141 aa3.14□□□□□ -1.91
SPG11-220ENST00000559933 hADV29S1A0JD25 119 aa3.13□□□□□ -1.91
SPG11-220ENST00000559933 LST1O00453 97 aa3.13□□□□□ -1.91
SPG11-220ENST00000559933 ZNF861PO60384 105 aa3.13□□□□□ -1.91
SPG11-220ENST00000559933 LINC01547P58512 204 aaPredicted RBP3.13□□□□□ -1.91
SPG11-220ENST00000559933 Q6ZQY7 126 aa3.13□□□□□ -1.91
SPG11-220ENST00000559933 DEFB105AQ8NG35 78 aa3.13□□□□□ -1.91
SPG11-220ENST00000559933 KRTAP2-2Q9BYT5 123 aa3.13□□□□□ -1.91
SPG11-220ENST00000559933 SPCS1Q9Y6A9 102 aa3.13□□□□□ -1.91
SPG11-220ENST00000559933 H0Y9J4 135 aa3.12□□□□□ -1.91
SPG11-220ENST00000559933 H3BMG7 143 aa3.12□□□□□ -1.91
SPG11-220ENST00000559933 FABP2P12104 132 aa3.12□□□□□ -1.91
SPG11-220ENST00000559933 VAMP3Q15836 100 aa3.12□□□□□ -1.91
SPG11-220ENST00000559933 GAGE2AQ6NT46 116 aa3.12□□□□□ -1.91
SPG11-220ENST00000559933 A0A087X002 238 aa3.11□□□□□ -1.91
SPG11-220ENST00000559933 A0A0G2JQZ4 141 aa3.11□□□□□ -1.91
SPG11-220ENST00000559933 TRBV7-6A0A0J9YX20 115 aa3.11□□□□□ -1.91
SPG11-220ENST00000559933 K7EP34 96 aa3.11□□□□□ -1.91
SPG11-220ENST00000559933 COX6CP09669 75 aa3.11□□□□□ -1.91
SPG11-220ENST00000559933 KRTAP1-4P0C5Y4 121 aa3.11□□□□□ -1.91
SPG11-220ENST00000559933 ATXN8Q156A1 80 aa3.11□□□□□ -1.91
SPG11-220ENST00000559933 SPRR4Q96PI1 79 aa3.11□□□□□ -1.91
SPG11-220ENST00000559933 DHRS4-AS1Q9P1J3 65 aa3.11□□□□□ -1.91
SPG11-220ENST00000559933 CBY1Q9Y3M2 126 aa3.11□□□□□ -1.91
SPG11-220ENST00000559933 FLG2Q5D862 2391 aaPredicted RBP3.11□□□□□ -1.91
SPG11-220ENST00000559933 IGLV9-49A0A0B4J1Y8 123 aa3.1□□□□□ -1.91
SPG11-220ENST00000559933 C9JAW5 83 aa3.1□□□□□ -1.91
SPG11-220ENST00000559933 H0YGX0 51 aa3.1□□□□□ -1.91
SPG11-220ENST00000559933 SLC25A20O43772 301 aa3.1□□□□□ -1.91
SPG11-220ENST00000559933 Q8N377 158 aa3.1□□□□□ -1.91
SPG11-220ENST00000559933 DNAL4O96015 105 aa3.09□□□□□ -1.91
SPG11-220ENST00000559933 KRTAP10-7P60409 375 aaPredicted RBP3.09□□□□□ -1.91
SPG11-220ENST00000559933 KRTAP13-2Q52LG2 175 aa3.09□□□□□ -1.91
SPG11-220ENST00000559933 SPINK6Q6UWN8 80 aa3.09□□□□□ -1.91
SPG11-220ENST00000559933 PRO0461Q9UI25 63 aa3.09□□□□□ -1.91
SPG11-220ENST00000559933 IGLV5-48A0A075B6I7 105 aa3.08□□□□□ -1.92
SPG11-220ENST00000559933 TRBV20-1A0A075B6N2 111 aa3.08□□□□□ -1.92
SPG11-220ENST00000559933 TRACP01848 142 aa3.08□□□□□ -1.92
SPG11-220ENST00000559933 INAFM2P0DMQ5 153 aa3.08□□□□□ -1.92
SPG11-220ENST00000559933 MT3P25713 68 aa3.08□□□□□ -1.92
SPG11-220ENST00000559933 KRTAP10-6P60371 365 aaPredicted RBP3.08□□□□□ -1.92
SPG11-220ENST00000559933 LYRM7Q5U5X0 104 aa3.08□□□□□ -1.92
SPG11-220ENST00000559933 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.08□□□□□ -1.92
SPG11-220ENST00000559933 SMIM29Q86T20 159 aa3.08□□□□□ -1.92
SPG11-220ENST00000559933 PRR26Q8N8Z3 221 aa3.08□□□□□ -1.92
SPG11-220ENST00000559933 ORMDL1Q9P0S3 153 aa3.08□□□□□ -1.92
SPG11-220ENST00000559933 TNXBP22105 4242 aa3.08□□□□□ -1.92
SPG11-220ENST00000559933 A0A1B0GX51 115 aa3.07□□□□□ -1.92
SPG11-220ENST00000559933 BAALC-AS2P0C853 105 aa3.07□□□□□ -1.92
SPG11-220ENST00000559933 MOBPQ13875 183 aa3.07□□□□□ -1.92
SPG11-220ENST00000559933 LINC00483Q53H64 154 aa3.07□□□□□ -1.92
SPG11-220ENST00000559933 C9orf153Q5TBE3 101 aa3.07□□□□□ -1.92
SPG11-220ENST00000559933 TEX49A0A1B0GTD5 131 aa3.06□□□□□ -1.92
SPG11-220ENST00000559933 SPRR1BP22528 89 aa3.06□□□□□ -1.92
SPG11-220ENST00000559933 HRCT1Q6UXD1 115 aa3.06□□□□□ -1.92
SPG11-220ENST00000559933 GTF2H5Q6ZYL4 71 aa3.06□□□□□ -1.92
SPG11-220ENST00000559933 ANKRD29Q8N6D5 301 aa3.06□□□□□ -1.92
SPG11-220ENST00000559933 LAMTOR3Q9UHA4 124 aa3.06□□□□□ -1.92
SPG11-220ENST00000559933 ZNF706Q9Y5V0 76 aaPredicted RBP3.06□□□□□ -1.92
SPG11-220ENST00000559933 NDUFV3P56181 108 aaKnown RBP3.05□□□□□ -1.92
SPG11-220ENST00000559933 UBE2V1Q13404 147 aa3.05□□□□□ -1.92
SPG11-220ENST00000559933 H3BT86 120 aa3.04□□□□□ -1.92
SPG11-220ENST00000559933 MT1HL1P0DM35 61 aa3.04□□□□□ -1.92
SPG11-220ENST00000559933 Q8NBF4 154 aa3.04□□□□□ -1.92
SPG11-220ENST00000559933 C14orf132Q9NPU4 83 aa3.04□□□□□ -1.92
SPG11-220ENST00000559933 TMEM256-PLSCR3K7ERE1 68 aa3.03□□□□□ -1.92
SPG11-220ENST00000559933 SNCGO76070 127 aa3.03□□□□□ -1.92
SPG11-220ENST00000559933 CRYGAP11844 174 aa3.03□□□□□ -1.92
SPG11-220ENST00000559933 ETDBQ3ZM63 59 aa3.03□□□□□ -1.92
SPG11-220ENST00000559933 FAM229BQ4G0N7 80 aa3.03□□□□□ -1.92
SPG11-220ENST00000559933 OCIAD2Q56VL3 154 aa3.03□□□□□ -1.92
SPG11-220ENST00000559933 IGFL1Q6UW32 110 aa3.03□□□□□ -1.92
SPG11-220ENST00000559933 TYMSOSQ8TAI1 123 aa3.03□□□□□ -1.92
SPG11-220ENST00000559933 LINC01600Q96MT4 127 aa3.03□□□□□ -1.92
SPG11-220ENST00000559933 F8WEM9 126 aa3.02□□□□□ -1.93
SPG11-220ENST00000559933 PCP4P48539 62 aa3.02□□□□□ -1.93
SPG11-220ENST00000559933 VPS25Q9BRG1 176 aa3.02□□□□□ -1.93
SPG11-220ENST00000559933 IGLV8-61A0A075B6I0 122 aa3.01□□□□□ -1.93
SPG11-220ENST00000559933 A0A1W2PNM2 257 aa3.01□□□□□ -1.93
SPG11-220ENST00000559933 F8W1H4 67 aa3.01□□□□□ -1.93
SPG11-220ENST00000559933 KRTAP10-8P60410 259 aa3.01□□□□□ -1.93
SPG11-220ENST00000559933 PPDPFLQ8WWR9 84 aa3.01□□□□□ -1.93
SPG11-220ENST00000559933 OBSCN-AS1Q96MR7 158 aa3.01□□□□□ -1.93
SPG11-220ENST00000559933 TRBV7-4A0A0J9YYF1 115 aa3□□□□□ -1.93
SPG11-220ENST00000559933 RBM3P98179 157 aaKnown RBP3□□□□□ -1.93
SPG11-220ENST00000559933 Q6ZQT0 140 aa3□□□□□ -1.93
SPG11-220ENST00000559933 TEN1Q86WV5 123 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms